RNA–Protein interactions for RNA: ENST00000479614.1

NF1-210, Transcript of neurofibromin 1, humanhuman

TSL 5

Gene NF1, Length 1,114 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NF1-210ENST00000479614 WBP1LQ9NX94 342 aa8.9□□□□□ -0.98
NF1-210ENST00000479614 KIAA1468Q9P260 1216 aa8.9□□□□□ -0.98
NF1-210ENST00000479614 PREX2Q70Z35 1606 aa8.9□□□□□ -0.99
NF1-210ENST00000479614 PCF11O94913 1555 aaKnown RBP8.9□□□□□ -0.99
NF1-210ENST00000479614 HECW2Q9P2P5 1572 aa8.9□□□□□ -0.99
NF1-210ENST00000479614 PTPRMP28827 1452 aa8.89□□□□□ -0.99
NF1-210ENST00000479614 CDC42BPAQ5VT25 1732 aa8.89□□□□□ -0.99
NF1-210ENST00000479614 KCNC4Q03721 635 aa8.89□□□□□ -0.99
NF1-210ENST00000479614 ATP10AO60312 1499 aa8.89□□□□□ -0.99
NF1-210ENST00000479614 FER1L4A9Z1Z3 1794 aa8.89□□□□□ -0.99
NF1-210ENST00000479614 RIMS1Q86UR5 1692 aaKnown RBP8.88□□□□□ -0.99
NF1-210ENST00000479614 MADDQ8WXG6 1647 aa8.87□□□□□ -0.99
NF1-210ENST00000479614 SEPT9Q9UHD8 586 aaPredicted RBP8.87□□□□□ -0.99
NF1-210ENST00000479614 C9orf84Q5VXU9 1444 aa8.87□□□□□ -0.99
NF1-210ENST00000479614 KDM5CP41229 1560 aa8.86□□□□□ -0.99
NF1-210ENST00000479614 ITSN2Q9NZM3 1697 aa8.86□□□□□ -0.99
NF1-210ENST00000479614 PLEKHH2Q8IVE3 1493 aa8.86□□□□□ -0.99
NF1-210ENST00000479614 ONECUT3O60422 494 aaPredicted RBP8.86□□□□□ -0.99
NF1-210ENST00000479614 REREQ9P2R6 1566 aa8.86□□□□□ -0.99
NF1-210ENST00000479614 MLH3Q9UHC1 1453 aa8.85□□□□□ -0.99
NF1-210ENST00000479614 FAM98CQ17RN3 349 aaKnown RBP8.84□□□□□ -0.99
NF1-210ENST00000479614 C6orf132Q5T0Z8 1188 aa8.84□□□□□ -0.99
NF1-210ENST00000479614 ESF1Q9H501 851 aaKnown RBP8.84□□□□□ -0.99
NF1-210ENST00000479614 ABCC1P33527 1531 aa8.84□□□□□ -0.99
NF1-210ENST00000479614 MTUS2Q5JR59 1369 aa8.84□□□□□ -0.99
NF1-210ENST00000479614 YEATS2Q9ULM3 1422 aa8.83□□□□□ -1
NF1-210ENST00000479614 TRIM6-TRIM34B2RNG4 842 aa8.83□□□□□ -1
NF1-210ENST00000479614 EPAS1Q99814 870 aa8.83□□□□□ -1
NF1-210ENST00000479614 TSR3Q9UJK0 312 aaKnown RBP8.83□□□□□ -1
NF1-210ENST00000479614 CCNB3Q8WWL7 1395 aa8.83□□□□□ -1
NF1-210ENST00000479614 KIAA1107Q9UPP5 1409 aa8.82□□□□□ -1
NF1-210ENST00000479614 AFAP1Q8N556 730 aa8.82□□□□□ -1
NF1-210ENST00000479614 CDKN2AIPQ9NXV6 580 aaPredicted RBP8.82□□□□□ -1
NF1-210ENST00000479614 HPS5Q9UPZ3 1129 aa8.82□□□□□ -1
NF1-210ENST00000479614 PREX1Q8TCU6 1659 aa8.81□□□□□ -1
NF1-210ENST00000479614 AGLP35573 1532 aa8.81□□□□□ -1
NF1-210ENST00000479614 ARHGEF12Q9NZN5 1544 aa8.81□□□□□ -1
NF1-210ENST00000479614 RSPH4AQ5TD94 716 aa8.81□□□□□ -1
NF1-210ENST00000479614 CADPS2Q86UW7 1296 aa8.81□□□□□ -1
NF1-210ENST00000479614 LRCH3Q96II8 777 aa8.81□□□□□ -1
NF1-210ENST00000479614 CFDP1Q9UEE9 299 aaPredicted RBP8.81□□□□□ -1
NF1-210ENST00000479614 DIP2CQ9Y2E4 1556 aa8.81□□□□□ -1
NF1-210ENST00000479614 KIDINS220Q9ULH0 1771 aa8.81□□□□□ -1
NF1-210ENST00000479614 CEP162Q5TB80 1403 aa8.8□□□□□ -1
NF1-210ENST00000479614 EHBP1L1Q8N3D4 1523 aa8.8□□□□□ -1
NF1-210ENST00000479614 GPATCH8Q9UKJ3 1502 aaKnown RBP8.8□□□□□ -1
NF1-210ENST00000479614 SUPT6HQ7KZ85 1726 aaKnown RBP8.8□□□□□ -1
NF1-210ENST00000479614 LAPTM4AQ15012 233 aa8.8□□□□□ -1
NF1-210ENST00000479614 SIGLEC1Q9BZZ2 1709 aa8.8□□□□□ -1
NF1-210ENST00000479614 CNTLNQ9NXG0 1405 aa8.8□□□□□ -1
NF1-210ENST00000479614 ADGBQ8N7X0 1667 aa8.79□□□□□ -1
NF1-210ENST00000479614 LCE2BO14633 110 aa8.79□□□□□ -1
NF1-210ENST00000479614 CAMK2BQ13554 666 aa8.79□□□□□ -1
NF1-210ENST00000479614 MLECQ14165 292 aa8.79□□□□□ -1
NF1-210ENST00000479614 ZNF777Q9ULD5 760 aaPredicted RBP8.79□□□□□ -1
NF1-210ENST00000479614 ABCA6Q8N139 1617 aa8.79□□□□□ -1
NF1-210ENST00000479614 SPAG9O60271 1321 aaKnown RBP8.79□□□□□ -1
NF1-210ENST00000479614 MROH2AA6NES4 1674 aa8.78□□□□□ -1
NF1-210ENST00000479614 SAMD9LQ8IVG5 1584 aa8.78□□□□□ -1
NF1-210ENST00000479614 DPYSL4O14531 572 aa8.78□□□□□ -1
NF1-210ENST00000479614 RBM33Q96EV2 1170 aaKnown RBP8.78□□□□□ -1
NF1-210ENST00000479614 TRAPPC8Q9Y2L5 1435 aa8.78□□□□□ -1
NF1-210ENST00000479614 LMTK3Q96Q04 1460 aa8.77□□□□□ -1
NF1-210ENST00000479614 ATP7AQ04656 1500 aa8.76□□□□□ -1.01
NF1-210ENST00000479614 SYCP2Q9BX26 1530 aa8.76□□□□□ -1.01
NF1-210ENST00000479614 GFRA3O60609 400 aa8.76□□□□□ -1.01
NF1-210ENST00000479614 C3P01024 1663 aa8.75□□□□□ -1.01
NF1-210ENST00000479614 MAP3K1Q13233 1512 aa8.75□□□□□ -1.01
NF1-210ENST00000479614 TIAM1Q13009 1591 aa8.75□□□□□ -1.01
NF1-210ENST00000479614 RTEL1-TNFRSF6BF6WH68 1400 aa8.75□□□□□ -1.01
NF1-210ENST00000479614 DDX12PQ92771 950 aa8.75□□□□□ -1.01
NF1-210ENST00000479614 INO80Q9ULG1 1556 aaPredicted RBP8.74□□□□□ -1.01
NF1-210ENST00000479614 UHRF1BP1Q6BDS2 1440 aa8.74□□□□□ -1.01
NF1-210ENST00000479614 VPS8Q8N3P4 1428 aa8.74□□□□□ -1.01
NF1-210ENST00000479614 HNRNPMP52272 730 aaKnown RBP eCLIP8.74□□□□□ -1.01
NF1-210ENST00000479614 TRAF7Q6Q0C0 670 aa8.74□□□□□ -1.01
NF1-210ENST00000479614 TSKSQ9UJT2 592 aa8.74□□□□□ -1.01
NF1-210ENST00000479614 A2MP01023 1474 aa8.73□□□□□ -1.01
NF1-210ENST00000479614 PACS2Q86VP3 889 aa8.73□□□□□ -1.01
NF1-210ENST00000479614 NPATQ14207 1427 aa8.72□□□□□ -1.01
NF1-210ENST00000479614 FAM135AQ9P2D6 1515 aa8.72□□□□□ -1.01
NF1-210ENST00000479614 TSPY4P0CV99 314 aa8.72□□□□□ -1.01
NF1-210ENST00000479614 TSPY10P0CW01 314 aa8.72□□□□□ -1.01
NF1-210ENST00000479614 PPP4CP60510 307 aa8.72□□□□□ -1.01
NF1-210ENST00000479614 EN1Q05925 392 aaPredicted RBP8.72□□□□□ -1.01
NF1-210ENST00000479614 TJAP1Q5JTD0 557 aa8.72□□□□□ -1.01
NF1-210ENST00000479614 FBXO41Q8TF61 875 aa8.72□□□□□ -1.01
NF1-210ENST00000479614 NCOA2Q15596 1464 aa8.71□□□□□ -1.01
NF1-210ENST00000479614 PLXNC1O60486 1568 aa8.71□□□□□ -1.02
NF1-210ENST00000479614 TSR1Q2NL82 804 aaKnown RBP8.71□□□□□ -1.02
NF1-210ENST00000479614 PRKD2Q9BZL6 878 aa8.71□□□□□ -1.02
NF1-210ENST00000479614 CCDC141Q6ZP82 1450 aa8.7□□□□□ -1.02
NF1-210ENST00000479614 ARHGEF5Q12774 1597 aa8.7□□□□□ -1.02
NF1-210ENST00000479614 CLTCQ00610 1675 aaKnown RBP8.7□□□□□ -1.02
NF1-210ENST00000479614 MAP3K7O43318 606 aa8.7□□□□□ -1.02
NF1-210ENST00000479614 NBR1Q14596 966 aa8.7□□□□□ -1.02
NF1-210ENST00000479614 LRRC9Q6ZRR7 1453 aa8.7□□□□□ -1.02
NF1-210ENST00000479614 MBD5Q9P267 1494 aa8.7□□□□□ -1.02
NF1-210ENST00000479614 STRCQ7RTU9 1775 aa8.69□□□□□ -1.02
NF1-210ENST00000479614 NRG2O14511 850 aaPredicted RBP8.69□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 59.4 ms