RNA–Protein interactions for RNA: ENST00000479614.1

NF1-210, Transcript of neurofibromin 1, humanhuman

TSL 5

Gene NF1, Length 1,114 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NF1-210ENST00000479614 AEBP2Q6ZN18 517 aaPredicted RBP22.76■■□□□ 1.23
NF1-210ENST00000479614 CHIC1Q5VXU3 224 aa21.34■■□□□ 1.01
NF1-210ENST00000479614 SENP3Q9H4L4 574 aaPredicted RBP19.46■□□□□ 0.71
NF1-210ENST00000479614 PHF23Q9BUL5 403 aaPredicted RBP19.15■□□□□ 0.66
NF1-210ENST00000479614 FOXD1Q16676 465 aa18.17■□□□□ 0.5
NF1-210ENST00000479614 POTEDQ86YR6 584 aa17.16■□□□□ 0.34
NF1-210ENST00000479614 MSH5O43196 834 aa17.1■□□□□ 0.33
NF1-210ENST00000479614 PLPPR3Q6T4P5 718 aa16.93■□□□□ 0.3
NF1-210ENST00000479614 PIAS4Q8N2W9 510 aaPredicted RBP16.92■□□□□ 0.3
NF1-210ENST00000479614 PPP6R1Q9UPN7 881 aa16.77■□□□□ 0.28
NF1-210ENST00000479614 ADRA2BP18089 450 aa16.7■□□□□ 0.26
NF1-210ENST00000479614 MAPK8IP2Q13387 824 aaPredicted RBP15.42■□□□□ 0.06
NF1-210ENST00000479614 DMRT2Q9Y5R5 561 aa15.38■□□□□ 0.05
NF1-210ENST00000479614 SCAF1Q9H7N4 1312 aaKnown RBP15.27■□□□□ 0.04
NF1-210ENST00000479614 CACNB1Q02641 598 aaPredicted RBP14.84□□□□□ -0.03
NF1-210ENST00000479614 PPP4R3CPQ6ZMV5 832 aa14.8□□□□□ -0.04
NF1-210ENST00000479614 DCAF8L1A6NGE4 600 aa14.77□□□□□ -0.05
NF1-210ENST00000479614 HOXD11P31277 338 aaPredicted RBP14.71□□□□□ -0.05
NF1-210ENST00000479614 CNKSR2Q8WXI2 1034 aa14.59□□□□□ -0.07
NF1-210ENST00000479614 RNF39Q9H2S5 420 aa14.58□□□□□ -0.08
NF1-210ENST00000479614 RNF216Q9NWF9 866 aaPredicted RBP14.53□□□□□ -0.08
NF1-210ENST00000479614 C1QBPQ07021 282 aaKnown RBP14.34□□□□□ -0.11
NF1-210ENST00000479614 DNAJC5BQ9UF47 199 aa14.25□□□□□ -0.13
NF1-210ENST00000479614 NCBP3Q53F19 620 aaKnown RBP14.14□□□□□ -0.15
NF1-210ENST00000479614 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.01□□□□□ -0.179e-7■■□□□ 12.2
NF1-210ENST00000479614 NPM3O75607 178 aaKnown RBP13.96□□□□□ -0.17
NF1-210ENST00000479614 U3KPZ7 1027 aaPredicted RBP13.71□□□□□ -0.21
NF1-210ENST00000479614 NISCHQ9Y2I1 1504 aa13.63□□□□□ -0.23
NF1-210ENST00000479614 SPINK5Q9NQ38 1064 aaPredicted RBP13.58□□□□□ -0.24
NF1-210ENST00000479614 CAPN15O75808 1086 aa13.57□□□□□ -0.24
NF1-210ENST00000479614 DSG3P32926 999 aa13.55□□□□□ -0.24
NF1-210ENST00000479614 KCNA4P22459 653 aa13.45□□□□□ -0.26
NF1-210ENST00000479614 SLC4A2P04920 1241 aa13.4□□□□□ -0.26
NF1-210ENST00000479614 POTEHQ6S545 545 aa13.39□□□□□ -0.27
NF1-210ENST00000479614 TRHP20396 242 aaPredicted RBP13.29□□□□□ -0.28
NF1-210ENST00000479614 APLP2Q06481 763 aa13.27□□□□□ -0.29
NF1-210ENST00000479614 ZNF219Q9P2Y4 722 aaPredicted RBP13.25□□□□□ -0.29
NF1-210ENST00000479614 ABCB7O75027 752 aa13.24□□□□□ -0.29
NF1-210ENST00000479614 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.2□□□□□ -0.3
NF1-210ENST00000479614 HNRNPUL2Q1KMD3 747 aaKnown RBP13.2□□□□□ -0.3
NF1-210ENST00000479614 SAMD1Q6SPF0 538 aaPredicted RBP13.12□□□□□ -0.31
NF1-210ENST00000479614 RBM42Q9BTD8 480 aaKnown RBP12.94□□□□□ -0.34
NF1-210ENST00000479614 MYCNP04198 464 aaPredicted RBP12.92□□□□□ -0.34
NF1-210ENST00000479614 POLA2Q14181 598 aa12.87□□□□□ -0.35
NF1-210ENST00000479614 CHRDL2Q6WN34 429 aa12.77□□□□□ -0.37
NF1-210ENST00000479614 SLC4A1APQ9BWU0 796 aaKnown RBP12.64□□□□□ -0.39
NF1-210ENST00000479614 ATF5Q9Y2D1 282 aaPredicted RBP12.64□□□□□ -0.39
NF1-210ENST00000479614 FOXD4L1Q9NU39 408 aa12.63□□□□□ -0.39
NF1-210ENST00000479614 AKT1S1Q96B36 256 aa12.58□□□□□ -0.4
NF1-210ENST00000479614 ZBTB12Q9Y330 459 aaPredicted RBP12.58□□□□□ -0.4
NF1-210ENST00000479614 OSCARQ8IYS5 282 aa12.49□□□□□ -0.41
NF1-210ENST00000479614 REM2Q8IYK8 340 aaPredicted RBP12.46□□□□□ -0.41
NF1-210ENST00000479614 SP7Q8TDD2 431 aaPredicted RBP12.43□□□□□ -0.42
NF1-210ENST00000479614 PIP4P2Q8N4L2 257 aa12.4□□□□□ -0.42
NF1-210ENST00000479614 ZBTB22O15209 634 aa12.37□□□□□ -0.43
NF1-210ENST00000479614 PITPNM1O00562 1244 aa12.35□□□□□ -0.43
NF1-210ENST00000479614 CCDC180Q9P1Z9 1646 aa12.29□□□□□ -0.44
NF1-210ENST00000479614 FXR2P51116 673 aaKnown RBP eCLIP12.28□□□□□ -0.44
NF1-210ENST00000479614 ATXN8OSP0DMR3 200 aa12.26□□□□□ -0.45
NF1-210ENST00000479614 HAX1O00165 279 aa12.25□□□□□ -0.45
NF1-210ENST00000479614 SPDYE2BA6NHP3 402 aa12.17□□□□□ -0.46
NF1-210ENST00000479614 SPDYE6P0CI01 402 aa12.17□□□□□ -0.46
NF1-210ENST00000479614 SPDYE2Q495Y8 402 aa12.17□□□□□ -0.46
NF1-210ENST00000479614 FBLN2P98095 1184 aa12.16□□□□□ -0.46
NF1-210ENST00000479614 EVX2Q03828 476 aa12.08□□□□□ -0.48
NF1-210ENST00000479614 ABCC9O60706 1549 aa12.06□□□□□ -0.48
NF1-210ENST00000479614 MKRN4PQ13434 485 aaPredicted RBP12.05□□□□□ -0.48
NF1-210ENST00000479614 SPDYE1Q8NFV5 336 aaPredicted RBP12.03□□□□□ -0.48
NF1-210ENST00000479614 PRKAR2AP13861 404 aaKnown RBP12.02□□□□□ -0.49
NF1-210ENST00000479614 CLEC11AQ9Y240 323 aa12.02□□□□□ -0.49
NF1-210ENST00000479614 SSUH2Q9Y2M2 353 aa11.99□□□□□ -0.49
NF1-210ENST00000479614 ZNF692Q9BU19 519 aaPredicted RBP11.98□□□□□ -0.49
NF1-210ENST00000479614 C19orf67A6NJJ6 358 aa11.9□□□□□ -0.5
NF1-210ENST00000479614 CHADLQ6NUI6 762 aa11.83□□□□□ -0.52
NF1-210ENST00000479614 PABPN1Q86U42 306 aaKnown RBP eCLIP11.8□□□□□ -0.52
NF1-210ENST00000479614 GABBR2O75899 941 aa11.79□□□□□ -0.52
NF1-210ENST00000479614 PRR29P0C7W0 189 aa11.78□□□□□ -0.52
NF1-210ENST00000479614 LHX8Q68G74 356 aa11.65□□□□□ -0.54
NF1-210ENST00000479614 RB1CC1Q8TDY2 1594 aa11.64□□□□□ -0.55
NF1-210ENST00000479614 CD44P16070 742 aaKnown RBP11.62□□□□□ -0.55
NF1-210ENST00000479614 FARP1Q9Y4F1 1045 aaPredicted RBP11.62□□□□□ -0.55
NF1-210ENST00000479614 NACADO15069 1562 aa11.58□□□□□ -0.55
NF1-210ENST00000479614 POTEIP0CG38 1075 aa11.55□□□□□ -0.56
NF1-210ENST00000479614 CSRNP3Q8WYN3 585 aa11.54□□□□□ -0.56
NF1-210ENST00000479614 CLCN6P51797 869 aa11.49□□□□□ -0.57
NF1-210ENST00000479614 MYO15BQ96JP2 1530 aa11.47□□□□□ -0.57
NF1-210ENST00000479614 DCAF8L2P0C7V8 631 aa11.44□□□□□ -0.58
NF1-210ENST00000479614 ZNF579Q8NAF0 562 aaKnown RBP11.44□□□□□ -0.58
NF1-210ENST00000479614 CREBZFQ9NS37 354 aa11.43□□□□□ -0.58
NF1-210ENST00000479614 DCBLD2Q96PD2 775 aa11.42□□□□□ -0.58
NF1-210ENST00000479614 ZRANB1Q9UGI0 708 aa11.41□□□□□ -0.58
NF1-210ENST00000479614 STAG3Q9UJ98 1225 aa11.4□□□□□ -0.58
NF1-210ENST00000479614 UNC13AQ9UPW8 1703 aa11.37□□□□□ -0.59
NF1-210ENST00000479614 DCAF1Q9Y4B6 1507 aa11.34□□□□□ -0.59
NF1-210ENST00000479614 SPDYE4A6NLX3 237 aa11.33□□□□□ -0.6
NF1-210ENST00000479614 GALR2O43603 387 aaPredicted RBP11.32□□□□□ -0.6
NF1-210ENST00000479614 ZCCHC6Q5VYS8 1495 aaKnown RBP11.29□□□□□ -0.6
NF1-210ENST00000479614 PAK3O75914 559 aaPredicted RBP11.26□□□□□ -0.61
NF1-210ENST00000479614 EHMT2Q96KQ7 1210 aa11.26□□□□□ -0.61
NF1-210ENST00000479614 PHF12Q96QT6 1004 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms