RNA–Protein interactions for RNA: ENST00000466141.1

RPUSD3-212, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 2

Gene RPUSD3, Length 996 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-212ENST00000466141 ATAD2Q6PL18 1390 aa10.75□□□□□ -0.69
RPUSD3-212ENST00000466141 DCCP43146 1447 aa10.75□□□□□ -0.69
RPUSD3-212ENST00000466141 FKBP8Q14318 412 aa10.74□□□□□ -0.69
RPUSD3-212ENST00000466141 LRRC59Q96AG4 307 aaKnown RBP10.74□□□□□ -0.69
RPUSD3-212ENST00000466141 NGLY1Q96IV0 654 aa10.74□□□□□ -0.69
RPUSD3-212ENST00000466141 XRN1Q8IZH2 1706 aaKnown RBP10.74□□□□□ -0.69
RPUSD3-212ENST00000466141 ZRANB1Q9UGI0 708 aa10.73□□□□□ -0.69
RPUSD3-212ENST00000466141 ANKRD50Q9ULJ7 1429 aa10.73□□□□□ -0.69
RPUSD3-212ENST00000466141 IQGAP3Q86VI3 1631 aa10.73□□□□□ -0.69
RPUSD3-212ENST00000466141 NRXN3Q9Y4C0 1643 aa10.73□□□□□ -0.69
RPUSD3-212ENST00000466141 E9PCH4 1651 aa10.73□□□□□ -0.69
RPUSD3-212ENST00000466141 NALCNQ8IZF0 1738 aa10.71□□□□□ -0.69
RPUSD3-212ENST00000466141 METP08581 1390 aa10.7□□□□□ -0.7
RPUSD3-212ENST00000466141 USP21Q9UK80 565 aa10.7□□□□□ -0.7
RPUSD3-212ENST00000466141 ADGRL3Q9HAR2 1447 aa10.69□□□□□ -0.7
RPUSD3-212ENST00000466141 TRPC5Q9UL62 973 aaPredicted RBP10.68□□□□□ -0.7
RPUSD3-212ENST00000466141 C1orf167Q5SNV9 1468 aa10.68□□□□□ -0.7
RPUSD3-212ENST00000466141 HFM1A2PYH4 1435 aa10.67□□□□□ -0.7
RPUSD3-212ENST00000466141 ATRNO75882 1429 aa10.67□□□□□ -0.7
RPUSD3-212ENST00000466141 NAIPQ13075 1403 aa10.67□□□□□ -0.7
RPUSD3-212ENST00000466141 EP400Q96L91 3159 aa10.66□□□□□ -0.7
RPUSD3-212ENST00000466141 FNBP4Q8N3X1 1017 aaPredicted RBP10.66□□□□□ -0.7
RPUSD3-212ENST00000466141 ORAI2Q96SN7 254 aa10.66□□□□□ -0.7
RPUSD3-212ENST00000466141 PTCH1Q13635 1447 aa10.65□□□□□ -0.7
RPUSD3-212ENST00000466141 LAMC1P11047 1609 aa10.65□□□□□ -0.7
RPUSD3-212ENST00000466141 SOS2Q07890 1332 aaPredicted RBP10.64□□□□□ -0.71
RPUSD3-212ENST00000466141 BCL9LQ86UU0 1499 aa10.64□□□□□ -0.71
RPUSD3-212ENST00000466141 FOXD1Q16676 465 aa10.64□□□□□ -0.71
RPUSD3-212ENST00000466141 ZNF326Q5BKZ1 582 aaKnown RBP10.64□□□□□ -0.71
RPUSD3-212ENST00000466141 SPHKAPQ2M3C7 1700 aa10.64□□□□□ -0.71
RPUSD3-212ENST00000466141 ITGAEP38570 1179 aa10.63□□□□□ -0.71
RPUSD3-212ENST00000466141 DEFB132Q7Z7B7 95 aa10.63□□□□□ -0.71
RPUSD3-212ENST00000466141 COL22A1Q8NFW1 1626 aaPredicted RBP10.62□□□□□ -0.71
RPUSD3-212ENST00000466141 MYOM2P54296 1465 aa10.62□□□□□ -0.71
RPUSD3-212ENST00000466141 NUP155O75694 1391 aa10.62□□□□□ -0.71
RPUSD3-212ENST00000466141 ROBO2Q9HCK4 1378 aa10.62□□□□□ -0.71
RPUSD3-212ENST00000466141 XPCQ01831 940 aaPredicted RBP10.61□□□□□ -0.71
RPUSD3-212ENST00000466141 CCDC125Q86Z20 511 aa10.61□□□□□ -0.71
RPUSD3-212ENST00000466141 NEXMIFQ5QGS0 1516 aa10.61□□□□□ -0.71
RPUSD3-212ENST00000466141 BLMP54132 1417 aaPredicted RBP10.6□□□□□ -0.71
RPUSD3-212ENST00000466141 GJD4Q96KN9 370 aaPredicted RBP10.6□□□□□ -0.71
RPUSD3-212ENST00000466141 KDM2AQ9Y2K7 1162 aa10.6□□□□□ -0.71
RPUSD3-212ENST00000466141 GLI3P10071 1580 aa10.6□□□□□ -0.71
RPUSD3-212ENST00000466141 MARF1Q9Y4F3 1742 aaKnown RBP10.59□□□□□ -0.71
RPUSD3-212ENST00000466141 RALGAPBQ86X10 1494 aa10.59□□□□□ -0.71
RPUSD3-212ENST00000466141 LRP5O75197 1615 aa10.58□□□□□ -0.72
RPUSD3-212ENST00000466141 CLTCL1P53675 1640 aa10.58□□□□□ -0.72
RPUSD3-212ENST00000466141 PXDNQ92626 1479 aa10.58□□□□□ -0.72
RPUSD3-212ENST00000466141 BRWD3Q6RI45 1802 aa10.58□□□□□ -0.72
RPUSD3-212ENST00000466141 PSDA5PKW4 1024 aaPredicted RBP10.57□□□□□ -0.72
RPUSD3-212ENST00000466141 NEFLP07196 543 aa10.56□□□□□ -0.72
RPUSD3-212ENST00000466141 PDIA4P13667 645 aaKnown RBP10.56□□□□□ -0.72
RPUSD3-212ENST00000466141 ESCO1Q5FWF5 840 aa10.56□□□□□ -0.72
RPUSD3-212ENST00000466141 TNKS1BP1Q9C0C2 1729 aaKnown RBP10.55□□□□□ -0.72
RPUSD3-212ENST00000466141 SLIT2O94813 1529 aa10.55□□□□□ -0.72
RPUSD3-212ENST00000466141 FOXO3O43524 673 aa10.55□□□□□ -0.72
RPUSD3-212ENST00000466141 NPM3O75607 178 aaKnown RBP10.55□□□□□ -0.72
RPUSD3-212ENST00000466141 NPHP3Q7Z494 1330 aa10.55□□□□□ -0.72
RPUSD3-212ENST00000466141 NUTM2FA1L443 756 aa10.54□□□□□ -0.72
RPUSD3-212ENST00000466141 HRCP23327 699 aa10.54□□□□□ -0.72
RPUSD3-212ENST00000466141 UNC5CLQ8IV45 518 aa10.54□□□□□ -0.72
RPUSD3-212ENST00000466141 SF3B2Q13435 895 aaKnown RBP10.53□□□□□ -0.72
RPUSD3-212ENST00000466141 SEPT12Q8IYM1 358 aa10.53□□□□□ -0.72
RPUSD3-212ENST00000466141 KIF1BO60333 1816 aa10.53□□□□□ -0.72
RPUSD3-212ENST00000466141 CDC42BPGQ6DT37 1551 aa10.52□□□□□ -0.72
RPUSD3-212ENST00000466141 TRIM26Q12899 539 aaPredicted RBP10.52□□□□□ -0.73
RPUSD3-212ENST00000466141 USP32Q8NFA0 1604 aa10.51□□□□□ -0.73
RPUSD3-212ENST00000466141 PRAG1Q86YV5 1406 aa10.51□□□□□ -0.73
RPUSD3-212ENST00000466141 RAB3GAP2Q9H2M9 1393 aa10.51□□□□□ -0.73
RPUSD3-212ENST00000466141 IFFO2Q5TF58 517 aa10.5□□□□□ -0.73
RPUSD3-212ENST00000466141 KRT27Q7Z3Y8 459 aa10.49□□□□□ -0.73
RPUSD3-212ENST00000466141 CABLES1Q8TDN4 633 aa10.49□□□□□ -0.73
RPUSD3-212ENST00000466141 CCDC9Q9Y3X0 531 aaKnown RBP10.49□□□□□ -0.73
RPUSD3-212ENST00000466141 PLCH1Q4KWH8 1693 aa10.49□□□□□ -0.73
RPUSD3-212ENST00000466141 SPATA31A3Q5VYP0 1347 aa10.49□□□□□ -0.73
RPUSD3-212ENST00000466141 IFT172Q9UG01 1749 aa10.48□□□□□ -0.73
RPUSD3-212ENST00000466141 VGFO15240 615 aaPredicted RBP10.48□□□□□ -0.73
RPUSD3-212ENST00000466141 VPS72Q15906 364 aa10.48□□□□□ -0.73
RPUSD3-212ENST00000466141 WAPLQ7Z5K2 1190 aa10.48□□□□□ -0.73
RPUSD3-212ENST00000466141 PLEKHH1Q9ULM0 1364 aa10.48□□□□□ -0.73
RPUSD3-212ENST00000466141 PPLO60437 1756 aa10.47□□□□□ -0.73
RPUSD3-212ENST00000466141 A0A0G2JS52 829 aa10.47□□□□□ -0.73
RPUSD3-212ENST00000466141 BAG6P46379 1132 aa10.47□□□□□ -0.73
RPUSD3-212ENST00000466141 EN1Q05925 392 aaPredicted RBP10.47□□□□□ -0.73
RPUSD3-212ENST00000466141 R3HDM1Q15032 1099 aaKnown RBP10.47□□□□□ -0.73
RPUSD3-212ENST00000466141 FAM182BQ5T319 152 aa10.47□□□□□ -0.73
RPUSD3-212ENST00000466141 STK26Q9P289 416 aa10.47□□□□□ -0.73
RPUSD3-212ENST00000466141 LRPPRCP42704 1394 aaKnown RBP10.47□□□□□ -0.73
RPUSD3-212ENST00000466141 ONECUT3O60422 494 aaPredicted RBP10.46□□□□□ -0.73
RPUSD3-212ENST00000466141 KRT28Q7Z3Y7 464 aa10.46□□□□□ -0.73
RPUSD3-212ENST00000466141 PKNOX2Q96KN3 472 aa10.46□□□□□ -0.73
RPUSD3-212ENST00000466141 ABCA3Q99758 1704 aa10.45□□□□□ -0.74
RPUSD3-212ENST00000466141 FMN2Q9NZ56 1722 aa10.45□□□□□ -0.74
RPUSD3-212ENST00000466141 CCDC144AA2RUR9 1427 aa10.45□□□□□ -0.74
RPUSD3-212ENST00000466141 NWD2Q9ULI1 1742 aa10.44□□□□□ -0.74
RPUSD3-212ENST00000466141 KIF1AQ12756 1690 aa10.44□□□□□ -0.74
RPUSD3-212ENST00000466141 TNS3Q68CZ2 1445 aa10.44□□□□□ -0.74
RPUSD3-212ENST00000466141 PDE4CQ08493 712 aa10.44□□□□□ -0.74
RPUSD3-212ENST00000466141 FAM98CQ17RN3 349 aaKnown RBP10.44□□□□□ -0.74
RPUSD3-212ENST00000466141 ADGRF5Q8IZF2 1346 aa10.43□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms