RNA–Protein interactions for RNA: ENST00000462289.1

VPS36-202, Transcript of vacuolar protein sorting 36 homolog, humanhuman

TSL 2

Gene VPS36, Length 544 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-202ENST00000462289 HDGFP51858 240 aaKnown RBP9.38□□□□□ -0.91
VPS36-202ENST00000462289 TJAP1Q5JTD0 557 aa9.38□□□□□ -0.91
VPS36-202ENST00000462289 ABCC10Q5T3U5 1492 aa9.38□□□□□ -0.91
VPS36-202ENST00000462289 FMN1Q68DA7 1419 aa9.38□□□□□ -0.91
VPS36-202ENST00000462289 ATP10BO94823 1461 aa9.37□□□□□ -0.91
VPS36-202ENST00000462289 UBTFP17480 764 aaKnown RBP9.36□□□□□ -0.91
VPS36-202ENST00000462289 CLIP1P30622 1438 aa9.36□□□□□ -0.91
VPS36-202ENST00000462289 CEP162Q5TB80 1403 aa9.36□□□□□ -0.91
VPS36-202ENST00000462289 HECW1Q76N89 1606 aa9.35□□□□□ -0.91
VPS36-202ENST00000462289 SEMA3EO15041 775 aa9.35□□□□□ -0.91
VPS36-202ENST00000462289 SWT1Q5T5J6 900 aaKnown RBP9.35□□□□□ -0.91
VPS36-202ENST00000462289 NECTIN2Q92692 538 aa9.35□□□□□ -0.91
VPS36-202ENST00000462289 PPRC1Q5VV67 1664 aaKnown RBP9.35□□□□□ -0.91
VPS36-202ENST00000462289 MAP3K4Q9Y6R4 1608 aa9.34□□□□□ -0.91
VPS36-202ENST00000462289 PCF11O94913 1555 aaKnown RBP9.34□□□□□ -0.91
VPS36-202ENST00000462289 ASXL2Q76L83 1435 aa9.34□□□□□ -0.91
VPS36-202ENST00000462289 CASKIN1Q8WXD9 1431 aa9.34□□□□□ -0.91
VPS36-202ENST00000462289 APLP1P51693 650 aa9.34□□□□□ -0.91
VPS36-202ENST00000462289 SLF2Q8IX21 1173 aa9.34□□□□□ -0.91
VPS36-202ENST00000462289 MTRQ99707 1265 aa9.34□□□□□ -0.91
VPS36-202ENST00000462289 FYCO1Q9BQS8 1478 aa9.34□□□□□ -0.91
VPS36-202ENST00000462289 WDR7Q9Y4E6 1490 aa9.34□□□□□ -0.91
VPS36-202ENST00000462289 EPRSP07814 1512 aaKnown RBP9.33□□□□□ -0.92
VPS36-202ENST00000462289 ABCA9Q8IUA7 1624 aa9.32□□□□□ -0.92
VPS36-202ENST00000462289 RNF40O75150 1001 aa9.32□□□□□ -0.92
VPS36-202ENST00000462289 IL21Q9HBE4 155 aa9.32□□□□□ -0.92
VPS36-202ENST00000462289 ADGRG1Q9Y653 693 aa9.32□□□□□ -0.92
VPS36-202ENST00000462289 CFAP43Q8NDM7 1665 aa9.32□□□□□ -0.92
VPS36-202ENST00000462289 IRX2Q9BZI1 471 aaPredicted RBP9.31□□□□□ -0.92
VPS36-202ENST00000462289 TESPA1A2RU30 521 aaPredicted RBP9.3□□□□□ -0.92
VPS36-202ENST00000462289 DNAJB2P25686 324 aa9.3□□□□□ -0.92
VPS36-202ENST00000462289 LOC105371045A0A1W2PR82 267 aa9.29□□□□□ -0.92
VPS36-202ENST00000462289 NUTM2FA1L443 756 aa9.29□□□□□ -0.92
VPS36-202ENST00000462289 FCHSD2O94868 740 aa9.29□□□□□ -0.92
VPS36-202ENST00000462289 RBM46Q8TBY0 533 aaKnown RBP9.29□□□□□ -0.92
VPS36-202ENST00000462289 CDK13Q14004 1512 aaKnown RBP9.29□□□□□ -0.92
VPS36-202ENST00000462289 CCDC18Q5T9S5 1454 aa9.28□□□□□ -0.92
VPS36-202ENST00000462289 MAP3K1Q13233 1512 aa9.28□□□□□ -0.92
VPS36-202ENST00000462289 SLC4A3P48751 1232 aa9.28□□□□□ -0.92
VPS36-202ENST00000462289 TMEM134Q9H6X4 195 aa9.28□□□□□ -0.92
VPS36-202ENST00000462289 MAGI3Q5TCQ9 1506 aa9.27□□□□□ -0.93
VPS36-202ENST00000462289 ZNF516Q92618 1163 aa9.27□□□□□ -0.93
VPS36-202ENST00000462289 VPS8Q8N3P4 1428 aa9.27□□□□□ -0.93
VPS36-202ENST00000462289 ARAP3Q8WWN8 1544 aa9.26□□□□□ -0.93
VPS36-202ENST00000462289 PRR14Q9BWN1 585 aa9.26□□□□□ -0.93
VPS36-202ENST00000462289 RCCD1A6NED2 376 aa9.25□□□□□ -0.93
VPS36-202ENST00000462289 HIC1Q14526 733 aa9.25□□□□□ -0.93
VPS36-202ENST00000462289 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP9.25□□□□□ -0.93
VPS36-202ENST00000462289 TROQ12816 1431 aaPredicted RBP9.24□□□□□ -0.93
VPS36-202ENST00000462289 FAM161AQ3B820 660 aa9.24□□□□□ -0.93
VPS36-202ENST00000462289 SMYD5Q6GMV2 418 aa9.24□□□□□ -0.93
VPS36-202ENST00000462289 PPP1R18Q6NYC8 613 aa9.24□□□□□ -0.93
VPS36-202ENST00000462289 TTC37Q6PGP7 1564 aa9.24□□□□□ -0.93
VPS36-202ENST00000462289 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.23□□□□□ -0.93
VPS36-202ENST00000462289 PXYLP1Q8TE99 480 aa9.23□□□□□ -0.93
VPS36-202ENST00000462289 TIAM1Q13009 1591 aa9.23□□□□□ -0.93
VPS36-202ENST00000462289 KIF14Q15058 1648 aa9.23□□□□□ -0.93
VPS36-202ENST00000462289 TSPOAP1O95153 1857 aa9.22□□□□□ -0.93
VPS36-202ENST00000462289 GPR37O15354 613 aa9.22□□□□□ -0.93
VPS36-202ENST00000462289 RBM26Q5T8P6 1007 aaKnown RBP9.22□□□□□ -0.93
VPS36-202ENST00000462289 ZPR1O75312 459 aa9.21□□□□□ -0.94
VPS36-202ENST00000462289 OATP04181 439 aa9.21□□□□□ -0.94
VPS36-202ENST00000462289 COPS2P61201 443 aa9.21□□□□□ -0.94
VPS36-202ENST00000462289 EIF4ENIF1Q9NRA8 985 aaKnown RBP9.21□□□□□ -0.94
VPS36-202ENST00000462289 CDC42BPAQ5VT25 1732 aa9.21□□□□□ -0.94
VPS36-202ENST00000462289 MYO5CQ9NQX4 1742 aa9.2□□□□□ -0.94
VPS36-202ENST00000462289 CDC42BPBQ9Y5S2 1711 aa9.2□□□□□ -0.94
VPS36-202ENST00000462289 RANGAP1P46060 587 aaPredicted RBP9.2□□□□□ -0.94
VPS36-202ENST00000462289 HAP1P54257 671 aaPredicted RBP9.2□□□□□ -0.94
VPS36-202ENST00000462289 FAM69CQ0P6D2 419 aa9.2□□□□□ -0.94
VPS36-202ENST00000462289 NKX2-3Q8TAU0 364 aa9.2□□□□□ -0.94
VPS36-202ENST00000462289 KDM2AQ9Y2K7 1162 aa9.2□□□□□ -0.94
VPS36-202ENST00000462289 PCDHB3Q9Y5E6 796 aa9.2□□□□□ -0.94
VPS36-202ENST00000462289 TTBK1Q5TCY1 1321 aaPredicted RBP9.2□□□□□ -0.94
VPS36-202ENST00000462289 TEX14Q8IWB6 1497 aa9.2□□□□□ -0.94
VPS36-202ENST00000462289 EHBP1L1Q8N3D4 1523 aa9.2□□□□□ -0.94
VPS36-202ENST00000462289 PREX2Q70Z35 1606 aa9.2□□□□□ -0.94
VPS36-202ENST00000462289 METTL3Q86U44 580 aaKnown RBP9.19□□□□□ -0.94
VPS36-202ENST00000462289 V9GY48 417 aaPredicted RBP9.19□□□□□ -0.94
VPS36-202ENST00000462289 CD109Q6YHK3 1445 aa9.19□□□□□ -0.94
VPS36-202ENST00000462289 NEO1Q92859 1461 aa9.19□□□□□ -0.94
VPS36-202ENST00000462289 GNPATO15228 680 aa9.18□□□□□ -0.94
VPS36-202ENST00000462289 ACTN4O43707 911 aaKnown RBP9.18□□□□□ -0.94
VPS36-202ENST00000462289 SLC10A3P09131 477 aa9.18□□□□□ -0.94
VPS36-202ENST00000462289 PHLDB1Q86UU1 1377 aa9.18□□□□□ -0.94
VPS36-202ENST00000462289 TMUB1Q9BVT8 246 aa9.18□□□□□ -0.94
VPS36-202ENST00000462289 CFAP74Q9C0B2 1584 aa9.18□□□□□ -0.94
VPS36-202ENST00000462289 COL17A1Q9UMD9 1497 aaPredicted RBP9.18□□□□□ -0.94
VPS36-202ENST00000462289 PLCH2O75038 1416 aa9.17□□□□□ -0.94
VPS36-202ENST00000462289 PLEKHD1A6NEE1 506 aa9.17□□□□□ -0.94
VPS36-202ENST00000462289 KMT5BQ4FZB7 885 aa9.17□□□□□ -0.94
VPS36-202ENST00000462289 BLOC1S3Q6QNY0 202 aa9.17□□□□□ -0.94
VPS36-202ENST00000462289 PRKD2Q9BZL6 878 aa9.17□□□□□ -0.94
VPS36-202ENST00000462289 RICTORQ6R327 1708 aa9.17□□□□□ -0.94
VPS36-202ENST00000462289 FRMPD1Q5SYB0 1578 aa9.16□□□□□ -0.94
VPS36-202ENST00000462289 LRRC9Q6ZRR7 1453 aa9.16□□□□□ -0.94
VPS36-202ENST00000462289 CFHP08603 1231 aa9.16□□□□□ -0.94
VPS36-202ENST00000462289 FECHP22830 423 aa9.16□□□□□ -0.94
VPS36-202ENST00000462289 LAPTM4AQ15012 233 aa9.16□□□□□ -0.94
VPS36-202ENST00000462289 SUPT6HQ7KZ85 1726 aaKnown RBP9.15□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms