RNA–Protein interactions for RNA: ENST00000461047.2

NUP98-208, Transcript of nucleoporin 98, humanhuman

TSL 3

Gene NUP98, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-208ENST00000461047 ANKK1Q8NFD2 765 aa9□□□□□ -0.97
NUP98-208ENST00000461047 KCNV2Q8TDN2 545 aa9□□□□□ -0.97
NUP98-208ENST00000461047 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP9□□□□□ -0.97
NUP98-208ENST00000461047 DIP2BQ9P265 1576 aa8.99□□□□□ -0.97
NUP98-208ENST00000461047 MIA2Q96PC5 1412 aa8.99□□□□□ -0.97
NUP98-208ENST00000461047 HAP1P54257 671 aaPredicted RBP8.99□□□□□ -0.97
NUP98-208ENST00000461047 THSD4Q6ZMP0 1018 aa8.99□□□□□ -0.97
NUP98-208ENST00000461047 MAGI3Q5TCQ9 1506 aa8.99□□□□□ -0.97
NUP98-208ENST00000461047 ABCA9Q8IUA7 1624 aa8.98□□□□□ -0.97
NUP98-208ENST00000461047 MYOM3Q5VTT5 1437 aa8.98□□□□□ -0.97
NUP98-208ENST00000461047 PLEKHH2Q8IVE3 1493 aa8.98□□□□□ -0.97
NUP98-208ENST00000461047 FAM50AQ14320 339 aaKnown RBP8.98□□□□□ -0.97
NUP98-208ENST00000461047 PLA2G2EQ9NZK7 142 aa8.98□□□□□ -0.97
NUP98-208ENST00000461047 ARHGAP5Q13017 1502 aa8.98□□□□□ -0.97
NUP98-208ENST00000461047 GPATCH8Q9UKJ3 1502 aaKnown RBP8.98□□□□□ -0.97
NUP98-208ENST00000461047 LRRIQ1Q96JM4 1722 aa8.97□□□□□ -0.97
NUP98-208ENST00000461047 FANCAO15360 1455 aa8.97□□□□□ -0.97
NUP98-208ENST00000461047 NEO1Q92859 1461 aa8.97□□□□□ -0.97
NUP98-208ENST00000461047 ARAP3Q8WWN8 1544 aa8.97□□□□□ -0.97
NUP98-208ENST00000461047 TSPY4P0CV99 314 aa8.97□□□□□ -0.97
NUP98-208ENST00000461047 TSPY10P0CW01 314 aa8.97□□□□□ -0.97
NUP98-208ENST00000461047 SEPT9Q9UHD8 586 aaPredicted RBP8.97□□□□□ -0.97
NUP98-208ENST00000461047 OSBPP22059 807 aa8.96□□□□□ -0.98
NUP98-208ENST00000461047 AKNAQ7Z591 1439 aa8.96□□□□□ -0.98
NUP98-208ENST00000461047 PRSS12P56730 875 aa8.95□□□□□ -0.98
NUP98-208ENST00000461047 FAM98CQ17RN3 349 aaKnown RBP8.95□□□□□ -0.98
NUP98-208ENST00000461047 CDCA7LQ96GN5 454 aa8.95□□□□□ -0.98
NUP98-208ENST00000461047 ZFRQ96KR1 1074 aaKnown RBP8.95□□□□□ -0.98
NUP98-208ENST00000461047 CFAP74Q9C0B2 1584 aa8.95□□□□□ -0.98
NUP98-208ENST00000461047 MAP3K4Q9Y6R4 1608 aa8.94□□□□□ -0.98
NUP98-208ENST00000461047 HNRNPMP52272 730 aaKnown RBP eCLIP8.94□□□□□ -0.98
NUP98-208ENST00000461047 FGD6Q6ZV73 1430 aa8.94□□□□□ -0.98
NUP98-208ENST00000461047 SCAPERQ9BY12 1400 aa8.94□□□□□ -0.98
NUP98-208ENST00000461047 KIAA1107Q9UPP5 1409 aa8.94□□□□□ -0.98
NUP98-208ENST00000461047 TTC37Q6PGP7 1564 aa8.94□□□□□ -0.98
NUP98-208ENST00000461047 ITSN2Q9NZM3 1697 aa8.94□□□□□ -0.98
NUP98-208ENST00000461047 TSKSQ9UJT2 592 aa8.93□□□□□ -0.98
NUP98-208ENST00000461047 DENND4BO75064 1496 aaPredicted RBP8.93□□□□□ -0.98
NUP98-208ENST00000461047 ADGRL1O94910 1474 aa8.93□□□□□ -0.98
NUP98-208ENST00000461047 MYO5CQ9NQX4 1742 aa8.93□□□□□ -0.98
NUP98-208ENST00000461047 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP8.92□□□□□ -0.98
NUP98-208ENST00000461047 ZNF644Q9H582 1327 aaPredicted RBP8.92□□□□□ -0.98
NUP98-208ENST00000461047 NBPF26B4DH59 902 aa8.92□□□□□ -0.98
NUP98-208ENST00000461047 PRIM1P49642 420 aaKnown RBP8.92□□□□□ -0.98
NUP98-208ENST00000461047 CDHR5Q9HBB8 845 aa8.92□□□□□ -0.98
NUP98-208ENST00000461047 SPAG9O60271 1321 aaKnown RBP8.91□□□□□ -0.98
NUP98-208ENST00000461047 SOWAHBA6NEL2 793 aa8.91□□□□□ -0.98
NUP98-208ENST00000461047 BCAMP50895 628 aa8.91□□□□□ -0.98
NUP98-208ENST00000461047 LRCH3Q96II8 777 aa8.91□□□□□ -0.98
NUP98-208ENST00000461047 PREX2Q70Z35 1606 aa8.91□□□□□ -0.98
NUP98-208ENST00000461047 KIF13AQ9H1H9 1805 aa8.9□□□□□ -0.98
NUP98-208ENST00000461047 RAPGEF3O95398 923 aa8.9□□□□□ -0.98
NUP98-208ENST00000461047 ITGAEP38570 1179 aa8.9□□□□□ -0.98
NUP98-208ENST00000461047 MLLT3P42568 568 aaPredicted RBP8.9□□□□□ -0.98
NUP98-208ENST00000461047 TRIM26Q12899 539 aaPredicted RBP8.9□□□□□ -0.98
NUP98-208ENST00000461047 AFAP1Q8N556 730 aa8.9□□□□□ -0.98
NUP98-208ENST00000461047 CDKN2AIPQ9NXV6 580 aaPredicted RBP8.9□□□□□ -0.98
NUP98-208ENST00000461047 CAMSAP2Q08AD1 1489 aa8.89□□□□□ -0.99
NUP98-208ENST00000461047 ZNF518AQ6AHZ1 1483 aa8.89□□□□□ -0.99
NUP98-208ENST00000461047 HDGFP51858 240 aaKnown RBP8.89□□□□□ -0.99
NUP98-208ENST00000461047 RBM27Q9P2N5 1060 aaKnown RBP8.89□□□□□ -0.99
NUP98-208ENST00000461047 PNMA3Q9UL41 463 aa8.89□□□□□ -0.99
NUP98-208ENST00000461047 RRBP1Q9P2E9 1410 aaKnown RBP8.88□□□□□ -0.99
NUP98-208ENST00000461047 TSPOAP1O95153 1857 aa8.88□□□□□ -0.99
NUP98-208ENST00000461047 NYAP1Q6ZVC0 841 aa8.88□□□□□ -0.99
NUP98-208ENST00000461047 TCOF1Q13428 1488 aaKnown RBP8.88□□□□□ -0.99
NUP98-208ENST00000461047 PTPN23Q9H3S7 1636 aa8.87□□□□□ -0.99
NUP98-208ENST00000461047 ACIN1Q9UKV3 1341 aaKnown RBP8.87□□□□□ -0.99
NUP98-208ENST00000461047 SMAPO00193 183 aa8.87□□□□□ -0.99
NUP98-208ENST00000461047 TATDN2Q93075 761 aa8.87□□□□□ -0.99
NUP98-208ENST00000461047 CDC42BPAQ5VT25 1732 aa8.87□□□□□ -0.99
NUP98-208ENST00000461047 CCDC141Q6ZP82 1450 aa8.87□□□□□ -0.99
NUP98-208ENST00000461047 MAGI2Q86UL8 1455 aa8.87□□□□□ -0.99
NUP98-208ENST00000461047 POGZQ7Z3K3 1410 aa8.87□□□□□ -0.99
NUP98-208ENST00000461047 ANKRD30AQ9BXX3 1397 aa8.86□□□□□ -0.99
NUP98-208ENST00000461047 CDC42BPBQ9Y5S2 1711 aa8.86□□□□□ -0.99
NUP98-208ENST00000461047 NUTM2FA1L443 756 aa8.86□□□□□ -0.99
NUP98-208ENST00000461047 SMYD5Q6GMV2 418 aa8.86□□□□□ -0.99
NUP98-208ENST00000461047 TSR3Q9UJK0 312 aaKnown RBP8.86□□□□□ -0.99
NUP98-208ENST00000461047 CHIC2Q9UKJ5 165 aa8.86□□□□□ -0.99
NUP98-208ENST00000461047 KDM6BO15054 1643 aa8.86□□□□□ -0.99
NUP98-208ENST00000461047 RTEL1-TNFRSF6BF6WH68 1400 aa8.86□□□□□ -0.99
NUP98-208ENST00000461047 SAMD9LQ8IVG5 1584 aa8.86□□□□□ -0.99
NUP98-208ENST00000461047 ABCC1P33527 1531 aa8.85□□□□□ -0.99
NUP98-208ENST00000461047 MBD5Q9P267 1494 aa8.85□□□□□ -0.99
NUP98-208ENST00000461047 SEMA3EO15041 775 aa8.85□□□□□ -0.99
NUP98-208ENST00000461047 PADI6Q6TGC4 694 aa8.85□□□□□ -0.99
NUP98-208ENST00000461047 NUDT18Q6ZVK8 323 aa8.85□□□□□ -0.99
NUP98-208ENST00000461047 HPS5Q9UPZ3 1129 aa8.85□□□□□ -0.99
NUP98-208ENST00000461047 DAPK1P53355 1430 aa8.85□□□□□ -0.99
NUP98-208ENST00000461047 TRAPPC8Q9Y2L5 1435 aa8.85□□□□□ -0.99
NUP98-208ENST00000461047 SYCP2Q9BX26 1530 aa8.85□□□□□ -0.99
NUP98-208ENST00000461047 ABCC5O15440 1437 aa8.84□□□□□ -0.99
NUP98-208ENST00000461047 PPP4CP60510 307 aa8.84□□□□□ -0.99
NUP98-208ENST00000461047 ARHGEF5Q12774 1597 aa8.84□□□□□ -0.99
NUP98-208ENST00000461047 RRP7BPQ9NSQ0 103 aa8.84□□□□□ -0.99
NUP98-208ENST00000461047 WBP1LQ9NX94 342 aa8.84□□□□□ -0.99
NUP98-208ENST00000461047 FAM198AQ9UFP1 575 aa8.84□□□□□ -0.99
NUP98-208ENST00000461047 MLH3Q9UHC1 1453 aa8.83□□□□□ -1
NUP98-208ENST00000461047 ARID4BQ4LE39 1312 aaPredicted RBP8.83□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 113.3 ms