RNA–Protein interactions for RNA: ENST00000436638.5

ECHDC1-208, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

APPRIS ALT2 TSL 3

Gene ECHDC1, Length 766 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-208ENST00000436638 COL17A1Q9UMD9 1497 aaPredicted RBP9.24□□□□□ -0.93
ECHDC1-208ENST00000436638 SPDYE16A6NNV3 312 aaPredicted RBP9.24□□□□□ -0.93
ECHDC1-208ENST00000436638 ITGAEP38570 1179 aa9.24□□□□□ -0.93
ECHDC1-208ENST00000436638 PDIA6Q15084 440 aa9.24□□□□□ -0.93
ECHDC1-208ENST00000436638 ARHGEF1Q92888 912 aaKnown RBP9.24□□□□□ -0.93
ECHDC1-208ENST00000436638 ARIH1Q9Y4X5 557 aaPredicted RBP9.24□□□□□ -0.93
ECHDC1-208ENST00000436638 ARHGEF12Q9NZN5 1544 aa9.24□□□□□ -0.93
ECHDC1-208ENST00000436638 FOSBP53539 338 aa9.23□□□□□ -0.93
ECHDC1-208ENST00000436638 DDX12PQ92771 950 aa9.23□□□□□ -0.93
ECHDC1-208ENST00000436638 AXIN2Q9Y2T1 843 aa9.23□□□□□ -0.93
ECHDC1-208ENST00000436638 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP9.23□□□□□ -0.93
ECHDC1-208ENST00000436638 RRBP1Q9P2E9 1410 aaKnown RBP9.22□□□□□ -0.93
ECHDC1-208ENST00000436638 MBD5Q9P267 1494 aa9.22□□□□□ -0.93
ECHDC1-208ENST00000436638 ARHGEF5Q12774 1597 aa9.22□□□□□ -0.93
ECHDC1-208ENST00000436638 KRTAP3-3Q9BYR6 98 aa9.22□□□□□ -0.93
ECHDC1-208ENST00000436638 KRTAP3-2Q9BYR7 98 aa9.22□□□□□ -0.93
ECHDC1-208ENST00000436638 DAPK1P53355 1430 aa9.22□□□□□ -0.93
ECHDC1-208ENST00000436638 MAGI2Q86UL8 1455 aa9.21□□□□□ -0.93
ECHDC1-208ENST00000436638 ZDHHC16Q969W1 377 aa9.21□□□□□ -0.94
ECHDC1-208ENST00000436638 RICTORQ6R327 1708 aa9.21□□□□□ -0.94
ECHDC1-208ENST00000436638 ZFYVE16Q7Z3T8 1539 aa9.21□□□□□ -0.94
ECHDC1-208ENST00000436638 PHF14O94880 888 aa9.2□□□□□ -0.94
ECHDC1-208ENST00000436638 PBX2P40425 430 aa9.2□□□□□ -0.94
ECHDC1-208ENST00000436638 CHIC2Q9UKJ5 165 aa9.2□□□□□ -0.94
ECHDC1-208ENST00000436638 PCDHGA10Q9Y5H3 936 aa9.2□□□□□ -0.94
ECHDC1-208ENST00000436638 RTEL1-TNFRSF6BF6WH68 1400 aa9.2□□□□□ -0.94
ECHDC1-208ENST00000436638 ABCC5O15440 1437 aa9.2□□□□□ -0.94
ECHDC1-208ENST00000436638 MLH3Q9UHC1 1453 aa9.2□□□□□ -0.94
ECHDC1-208ENST00000436638 ZMYM4Q5VZL5 1548 aa9.2□□□□□ -0.94
ECHDC1-208ENST00000436638 KDM5CP41229 1560 aa9.2□□□□□ -0.94
ECHDC1-208ENST00000436638 FRMPD1Q5SYB0 1578 aa9.2□□□□□ -0.94
ECHDC1-208ENST00000436638 DNMT1P26358 1616 aaKnown RBP9.2□□□□□ -0.94
ECHDC1-208ENST00000436638 GRXCR2A6NFK2 248 aa9.19□□□□□ -0.94
ECHDC1-208ENST00000436638 ARHGAP33O14559 1287 aa9.19□□□□□ -0.94
ECHDC1-208ENST00000436638 PTGER2P43116 358 aa9.19□□□□□ -0.94
ECHDC1-208ENST00000436638 POTEEQ6S8J3 1075 aa9.19□□□□□ -0.94
ECHDC1-208ENST00000436638 ANKRD13DQ6ZTN6 518 aa9.19□□□□□ -0.94
ECHDC1-208ENST00000436638 ARID4BQ4LE39 1312 aaPredicted RBP9.19□□□□□ -0.94
ECHDC1-208ENST00000436638 ANKRD30AQ9BXX3 1397 aa9.19□□□□□ -0.94
ECHDC1-208ENST00000436638 C9orf84Q5VXU9 1444 aa9.19□□□□□ -0.94
ECHDC1-208ENST00000436638 HECW2Q9P2P5 1572 aa9.19□□□□□ -0.94
ECHDC1-208ENST00000436638 PSEN2P49810 448 aa9.18□□□□□ -0.94
ECHDC1-208ENST00000436638 ATP7AQ04656 1500 aa9.18□□□□□ -0.94
ECHDC1-208ENST00000436638 TYW1BQ6NUM6 668 aa9.18□□□□□ -0.94
ECHDC1-208ENST00000436638 KCNK17Q96T54 332 aa9.18□□□□□ -0.94
ECHDC1-208ENST00000436638 SHANK2Q9UPX8 1470 aa9.18□□□□□ -0.94
ECHDC1-208ENST00000436638 ATP10AO60312 1499 aa9.17□□□□□ -0.94
ECHDC1-208ENST00000436638 RBM33Q96EV2 1170 aaKnown RBP9.17□□□□□ -0.94
ECHDC1-208ENST00000436638 EPAS1Q99814 870 aa9.17□□□□□ -0.94
ECHDC1-208ENST00000436638 ADAM33Q9BZ11 813 aa9.17□□□□□ -0.94
ECHDC1-208ENST00000436638 RRP7BPQ9NSQ0 103 aa9.17□□□□□ -0.94
ECHDC1-208ENST00000436638 MAST1Q9Y2H9 1570 aa9.16□□□□□ -0.94
ECHDC1-208ENST00000436638 YEATS2Q9ULM3 1422 aa9.16□□□□□ -0.94
ECHDC1-208ENST00000436638 PTPREP23469 700 aa9.16□□□□□ -0.94
ECHDC1-208ENST00000436638 NBR1Q14596 966 aa9.16□□□□□ -0.94
ECHDC1-208ENST00000436638 FBXW7Q969H0 707 aa9.16□□□□□ -0.94
ECHDC1-208ENST00000436638 BCL2L12Q9HB09 334 aa9.16□□□□□ -0.94
ECHDC1-208ENST00000436638 ARHGEF40Q8TER5 1519 aa9.15□□□□□ -0.94
ECHDC1-208ENST00000436638 LSM11P83369 360 aaKnown RBP eCLIP9.15□□□□□ -0.94
ECHDC1-208ENST00000436638 TRIM26Q12899 539 aaPredicted RBP9.15□□□□□ -0.94
ECHDC1-208ENST00000436638 BCANQ96GW7 911 aa9.15□□□□□ -0.94
ECHDC1-208ENST00000436638 CROCC2H7BZ55 1655 aa9.15□□□□□ -0.94
ECHDC1-208ENST00000436638 INO80Q9ULG1 1556 aaPredicted RBP9.15□□□□□ -0.95
ECHDC1-208ENST00000436638 A2MP01023 1474 aa9.15□□□□□ -0.95
ECHDC1-208ENST00000436638 KIDINS220Q9ULH0 1771 aa9.14□□□□□ -0.95
ECHDC1-208ENST00000436638 KIF15Q9NS87 1388 aa9.14□□□□□ -0.95
ECHDC1-208ENST00000436638 PLSCR2Q9NRY7 297 aa9.14□□□□□ -0.95
ECHDC1-208ENST00000436638 DIP2CQ9Y2E4 1556 aa9.14□□□□□ -0.95
ECHDC1-208ENST00000436638 ROCK1Q13464 1354 aa9.13□□□□□ -0.95
ECHDC1-208ENST00000436638 DHX29Q7Z478 1369 aaKnown RBP9.13□□□□□ -0.95
ECHDC1-208ENST00000436638 ABCA6Q8N139 1617 aa9.13□□□□□ -0.95
ECHDC1-208ENST00000436638 DMRTA1Q5VZB9 504 aa9.13□□□□□ -0.95
ECHDC1-208ENST00000436638 ADGRL2O95490 1459 aa9.13□□□□□ -0.95
ECHDC1-208ENST00000436638 ADGBQ8N7X0 1667 aa9.13□□□□□ -0.95
ECHDC1-208ENST00000436638 PTPRKQ15262 1439 aa9.13□□□□□ -0.95
ECHDC1-208ENST00000436638 NCOA1Q15788 1441 aa9.13□□□□□ -0.95
ECHDC1-208ENST00000436638 PLXNC1O60486 1568 aa9.12□□□□□ -0.95
ECHDC1-208ENST00000436638 DUOX2Q9NRD8 1548 aa9.12□□□□□ -0.95
ECHDC1-208ENST00000436638 SEMA3EO15041 775 aa9.12□□□□□ -0.95
ECHDC1-208ENST00000436638 KIF3BO15066 747 aa9.12□□□□□ -0.95
ECHDC1-208ENST00000436638 MAP3K7O43318 606 aa9.12□□□□□ -0.95
ECHDC1-208ENST00000436638 MLLT3P42568 568 aaPredicted RBP9.12□□□□□ -0.95
ECHDC1-208ENST00000436638 MLECQ14165 292 aa9.12□□□□□ -0.95
ECHDC1-208ENST00000436638 ESF1Q9H501 851 aaKnown RBP9.12□□□□□ -0.95
ECHDC1-208ENST00000436638 C6orf132Q5T0Z8 1188 aa9.11□□□□□ -0.95
ECHDC1-208ENST00000436638 GGT6Q6P531 493 aa9.11□□□□□ -0.95
ECHDC1-208ENST00000436638 SPNS2Q8IVW8 549 aa9.11□□□□□ -0.95
ECHDC1-208ENST00000436638 PODXL2Q9NZ53 605 aa9.11□□□□□ -0.95
ECHDC1-208ENST00000436638 ERBINQ96RT1 1412 aa9.1□□□□□ -0.95
ECHDC1-208ENST00000436638 ANKRD50Q9ULJ7 1429 aa9.1□□□□□ -0.95
ECHDC1-208ENST00000436638 REREQ9P2R6 1566 aa9.1□□□□□ -0.95
ECHDC1-208ENST00000436638 AGLP35573 1532 aa9.1□□□□□ -0.95
ECHDC1-208ENST00000436638 OSBPP22059 807 aa9.09□□□□□ -0.95
ECHDC1-208ENST00000436638 EN1Q05925 392 aaPredicted RBP9.09□□□□□ -0.95
ECHDC1-208ENST00000436638 TSR1Q2NL82 804 aaKnown RBP9.08□□□□□ -0.96
ECHDC1-208ENST00000436638 ADGRD1Q6QNK2 874 aa9.08□□□□□ -0.96
ECHDC1-208ENST00000436638 KANK1Q14678 1352 aa9.08□□□□□ -0.96
ECHDC1-208ENST00000436638 ACIN1Q9UKV3 1341 aaKnown RBP9.07□□□□□ -0.96
ECHDC1-208ENST00000436638 HFM1A2PYH4 1435 aa9.07□□□□□ -0.96
ECHDC1-208ENST00000436638 COL9A1P20849 921 aa9.07□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 91.5 ms