RNA–Protein interactions for RNA: ENST00000434192.2

GTF2A1-202, Transcript of general transcription factor IIA subunit 1, humanhuman

TSL 1 (best) BASIC

Gene GTF2A1, Length 1,199 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1-202ENST00000434192 CCDC18Q5T9S5 1454 aa10.79□□□□□ -0.68
GTF2A1-202ENST00000434192 TESPA1A2RU30 521 aaPredicted RBP10.78□□□□□ -0.68
GTF2A1-202ENST00000434192 SOWAHBA6NEL2 793 aa10.78□□□□□ -0.68
GTF2A1-202ENST00000434192 PLA2G2EQ9NZK7 142 aa10.78□□□□□ -0.68
GTF2A1-202ENST00000434192 MAP3K1Q13233 1512 aa10.78□□□□□ -0.68
GTF2A1-202ENST00000434192 PLB1Q6P1J6 1458 aa10.77□□□□□ -0.69
GTF2A1-202ENST00000434192 NBPF26B4DH59 902 aa10.77□□□□□ -0.69
GTF2A1-202ENST00000434192 NUDT18Q6ZVK8 323 aa10.77□□□□□ -0.69
GTF2A1-202ENST00000434192 ASXL2Q76L83 1435 aa10.76□□□□□ -0.69
GTF2A1-202ENST00000434192 PTGDRQ13258 359 aa10.76□□□□□ -0.69
GTF2A1-202ENST00000434192 RBM27Q9P2N5 1060 aaKnown RBP10.76□□□□□ -0.69
GTF2A1-202ENST00000434192 RBM26Q5T8P6 1007 aaKnown RBP10.75□□□□□ -0.69
GTF2A1-202ENST00000434192 LRCH3Q96II8 777 aa10.75□□□□□ -0.69
GTF2A1-202ENST00000434192 CDKN2AIPQ9NXV6 580 aaPredicted RBP10.75□□□□□ -0.69
GTF2A1-202ENST00000434192 NUP153P49790 1475 aaKnown RBP10.74□□□□□ -0.69
GTF2A1-202ENST00000434192 SMYD5Q6GMV2 418 aa10.74□□□□□ -0.69
GTF2A1-202ENST00000434192 TTC13Q8NBP0 860 aa10.74□□□□□ -0.69
GTF2A1-202ENST00000434192 EPRSP07814 1512 aaKnown RBP10.74□□□□□ -0.69
GTF2A1-202ENST00000434192 EHBP1L1Q8N3D4 1523 aa10.74□□□□□ -0.69
GTF2A1-202ENST00000434192 SAMD7Q7Z3H4 446 aa10.73□□□□□ -0.69
GTF2A1-202ENST00000434192 WBP1LQ9NX94 342 aa10.73□□□□□ -0.69
GTF2A1-202ENST00000434192 WDR7Q9Y4E6 1490 aa10.73□□□□□ -0.69
GTF2A1-202ENST00000434192 CDK13Q14004 1512 aaKnown RBP10.73□□□□□ -0.69
GTF2A1-202ENST00000434192 HPS5Q9UPZ3 1129 aa10.72□□□□□ -0.69
GTF2A1-202ENST00000434192 TTBK1Q5TCY1 1321 aaPredicted RBP10.72□□□□□ -0.69
GTF2A1-202ENST00000434192 SUPT6HQ7KZ85 1726 aaKnown RBP10.72□□□□□ -0.69
GTF2A1-202ENST00000434192 ABCA9Q8IUA7 1624 aa10.71□□□□□ -0.69
GTF2A1-202ENST00000434192 LRRC9Q6ZRR7 1453 aa10.69□□□□□ -0.7
GTF2A1-202ENST00000434192 FCHSD2O94868 740 aa10.69□□□□□ -0.7
GTF2A1-202ENST00000434192 FAM69CQ0P6D2 419 aa10.69□□□□□ -0.7
GTF2A1-202ENST00000434192 TSR3Q9UJK0 312 aaKnown RBP10.69□□□□□ -0.7
GTF2A1-202ENST00000434192 RNF40O75150 1001 aa10.68□□□□□ -0.7
GTF2A1-202ENST00000434192 FAM161AQ3B820 660 aa10.68□□□□□ -0.7
GTF2A1-202ENST00000434192 ATP1B4Q9UN42 357 aaPredicted RBP10.68□□□□□ -0.7
GTF2A1-202ENST00000434192 KIF14Q15058 1648 aa10.68□□□□□ -0.7
GTF2A1-202ENST00000434192 TEX14Q8IWB6 1497 aa10.68□□□□□ -0.7
GTF2A1-202ENST00000434192 HDGFP51858 240 aaKnown RBP10.67□□□□□ -0.7
GTF2A1-202ENST00000434192 PPP4CP60510 307 aa10.67□□□□□ -0.7
GTF2A1-202ENST00000434192 MAGI3Q5TCQ9 1506 aa10.67□□□□□ -0.7
GTF2A1-202ENST00000434192 ITSN2Q9NZM3 1697 aa10.66□□□□□ -0.7
GTF2A1-202ENST00000434192 EYA1Q99502 592 aa10.66□□□□□ -0.7
GTF2A1-202ENST00000434192 MYO5CQ9NQX4 1742 aa10.66□□□□□ -0.7
GTF2A1-202ENST00000434192 SWT1Q5T5J6 900 aaKnown RBP10.65□□□□□ -0.7
GTF2A1-202ENST00000434192 MTUS2Q5JR59 1369 aa10.65□□□□□ -0.71
GTF2A1-202ENST00000434192 ATP10BO94823 1461 aa10.64□□□□□ -0.71
GTF2A1-202ENST00000434192 ADGRG1Q9Y653 693 aa10.64□□□□□ -0.71
GTF2A1-202ENST00000434192 CFAP74Q9C0B2 1584 aa10.64□□□□□ -0.71
GTF2A1-202ENST00000434192 HIC1Q14526 733 aa10.63□□□□□ -0.71
GTF2A1-202ENST00000434192 NYAP1Q6ZVC0 841 aa10.63□□□□□ -0.71
GTF2A1-202ENST00000434192 TROQ12816 1431 aaPredicted RBP10.62□□□□□ -0.71
GTF2A1-202ENST00000434192 RBM46Q8TBY0 533 aaKnown RBP10.62□□□□□ -0.71
GTF2A1-202ENST00000434192 TTC37Q6PGP7 1564 aa10.61□□□□□ -0.71
GTF2A1-202ENST00000434192 FECHP22830 423 aa10.61□□□□□ -0.71
GTF2A1-202ENST00000434192 CDC42BPAQ5VT25 1732 aa10.61□□□□□ -0.71
GTF2A1-202ENST00000434192 RICTORQ6R327 1708 aa10.61□□□□□ -0.71
GTF2A1-202ENST00000434192 PREX2Q70Z35 1606 aa10.6□□□□□ -0.71
GTF2A1-202ENST00000434192 ARID3CA6NKF2 412 aa10.6□□□□□ -0.71
GTF2A1-202ENST00000434192 GPR37O15354 613 aa10.6□□□□□ -0.71
GTF2A1-202ENST00000434192 NCOA2Q15596 1464 aa10.6□□□□□ -0.71
GTF2A1-202ENST00000434192 GNPATO15228 680 aa10.59□□□□□ -0.71
GTF2A1-202ENST00000434192 GPIHBP1Q8IV16 184 aa10.59□□□□□ -0.71
GTF2A1-202ENST00000434192 CDK11AQ9UQ88 783 aaPredicted RBP10.59□□□□□ -0.71
GTF2A1-202ENST00000434192 RCCD1A6NED2 376 aa10.58□□□□□ -0.72
GTF2A1-202ENST00000434192 DNAJB2P25686 324 aa10.58□□□□□ -0.72
GTF2A1-202ENST00000434192 KANK4Q5T7N3 995 aaPredicted RBP10.58□□□□□ -0.72
GTF2A1-202ENST00000434192 PPARGC1BQ86YN6 1023 aaKnown RBP10.58□□□□□ -0.72
GTF2A1-202ENST00000434192 TULP1O00294 542 aaPredicted RBP10.57□□□□□ -0.72
GTF2A1-202ENST00000434192 SLF2Q8IX21 1173 aa10.57□□□□□ -0.72
GTF2A1-202ENST00000434192 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP10.57□□□□□ -0.725e-6■■■□□ 19
GTF2A1-202ENST00000434192 CD109Q6YHK3 1445 aa10.57□□□□□ -0.72
GTF2A1-202ENST00000434192 FRMPD1Q5SYB0 1578 aa10.56□□□□□ -0.72
GTF2A1-202ENST00000434192 CDC42BPBQ9Y5S2 1711 aa10.56□□□□□ -0.72
GTF2A1-202ENST00000434192 ITGBL1O95965 494 aaPredicted RBP10.56□□□□□ -0.72
GTF2A1-202ENST00000434192 COL17A1Q9UMD9 1497 aaPredicted RBP10.55□□□□□ -0.72
GTF2A1-202ENST00000434192 ARAP3Q8WWN8 1544 aa10.55□□□□□ -0.72
GTF2A1-202ENST00000434192 SLC4A3P48751 1232 aa10.55□□□□□ -0.72
GTF2A1-202ENST00000434192 TMEM134Q9H6X4 195 aa10.55□□□□□ -0.72
GTF2A1-202ENST00000434192 MYOM3Q5VTT5 1437 aa10.55□□□□□ -0.72
GTF2A1-202ENST00000434192 PTPN23Q9H3S7 1636 aa10.55□□□□□ -0.72
GTF2A1-202ENST00000434192 OATP04181 439 aa10.54□□□□□ -0.72
GTF2A1-202ENST00000434192 APLP1P51693 650 aa10.54□□□□□ -0.72
GTF2A1-202ENST00000434192 KCNC4Q03721 635 aa10.54□□□□□ -0.72
GTF2A1-202ENST00000434192 IFFO2Q5TF58 517 aa10.54□□□□□ -0.72
GTF2A1-202ENST00000434192 PXYLP1Q8TE99 480 aa10.54□□□□□ -0.72
GTF2A1-202ENST00000434192 NEO1Q92859 1461 aa10.54□□□□□ -0.72
GTF2A1-202ENST00000434192 PHLDB1Q86UU1 1377 aa10.53□□□□□ -0.72
GTF2A1-202ENST00000434192 RRBP1Q9P2E9 1410 aaKnown RBP10.53□□□□□ -0.72
GTF2A1-202ENST00000434192 PLEKHD1A6NEE1 506 aa10.53□□□□□ -0.72
GTF2A1-202ENST00000434192 METTL3Q86U44 580 aaKnown RBP10.53□□□□□ -0.72
GTF2A1-202ENST00000434192 FGD6Q6ZV73 1430 aa10.52□□□□□ -0.73
GTF2A1-202ENST00000434192 CROCC2H7BZ55 1655 aa10.51□□□□□ -0.73
GTF2A1-202ENST00000434192 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.51□□□□□ -0.73
GTF2A1-202ENST00000434192 NECTIN2Q92692 538 aa10.51□□□□□ -0.73
GTF2A1-202ENST00000434192 CCNB3Q8WWL7 1395 aa10.51□□□□□ -0.73
GTF2A1-202ENST00000434192 ARHGEF40Q8TER5 1519 aa10.5□□□□□ -0.73
GTF2A1-202ENST00000434192 A0A0G2JS52 829 aa10.5□□□□□ -0.73
GTF2A1-202ENST00000434192 TJAP1Q5JTD0 557 aa10.5□□□□□ -0.73
GTF2A1-202ENST00000434192 NLRP7Q8WX94 980 aa10.5□□□□□ -0.73
GTF2A1-202ENST00000434192 MTRQ99707 1265 aa10.5□□□□□ -0.73
GTF2A1-202ENST00000434192 MIA2Q96PC5 1412 aa10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 64 ms