RNA–Protein interactions for RNA: ENST00000422006.5

SSB-205, Transcript of Sjogren syndrome antigen B, humanhuman

TSL 5

Gene SSB, Length 2,463 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSB-205ENST00000422006 DHX57Q6P158 1386 aaKnown RBP11.24□□□□□ -0.61
SSB-205ENST00000422006 NEURL4Q96JN8 1562 aa11.23□□□□□ -0.61
SSB-205ENST00000422006 KIDINS220Q9ULH0 1771 aa11.23□□□□□ -0.61
SSB-205ENST00000422006 CDK12Q9NYV4 1490 aaPredicted RBP11.23□□□□□ -0.61
SSB-205ENST00000422006 HNRNPUQ00839 825 aaKnown RBP eCLIP11.23□□□□□ -0.61
SSB-205ENST00000422006 FAM135BQ49AJ0 1406 aa11.23□□□□□ -0.61
SSB-205ENST00000422006 ANP32CO43423 234 aa11.22□□□□□ -0.61
SSB-205ENST00000422006 KIAA1107Q9UPP5 1409 aa11.22□□□□□ -0.61
SSB-205ENST00000422006 ALKQ9UM73 1620 aa11.22□□□□□ -0.61
SSB-205ENST00000422006 KCTD17Q8N5Z5 321 aa11.21□□□□□ -0.61
SSB-205ENST00000422006 ADGBQ8N7X0 1667 aa11.21□□□□□ -0.62
SSB-205ENST00000422006 ANP32BQ92688 251 aaKnown RBP11.2□□□□□ -0.62
SSB-205ENST00000422006 FRAT2O75474 233 aaPredicted RBP11.2□□□□□ -0.62
SSB-205ENST00000422006 IRX3P78415 501 aaPredicted RBP11.2□□□□□ -0.62
SSB-205ENST00000422006 ANKLE2Q86XL3 938 aa11.2□□□□□ -0.62
SSB-205ENST00000422006 CLTCQ00610 1675 aaKnown RBP11.2□□□□□ -0.62
SSB-205ENST00000422006 NPHP4O75161 1426 aaPredicted RBP11.19□□□□□ -0.62
SSB-205ENST00000422006 CCDC18Q5T9S5 1454 aa11.19□□□□□ -0.62
SSB-205ENST00000422006 SAMD9LQ8IVG5 1584 aa11.18□□□□□ -0.62
SSB-205ENST00000422006 CDK11BP21127 795 aaKnown RBP11.18□□□□□ -0.62
SSB-205ENST00000422006 THEMISQ8N1K5 641 aaPredicted RBP11.18□□□□□ -0.62
SSB-205ENST00000422006 STK25O00506 426 aa11.18□□□□□ -0.62
SSB-205ENST00000422006 A2MP01023 1474 aa11.17□□□□□ -0.62
SSB-205ENST00000422006 PZPP20742 1482 aa11.17□□□□□ -0.62
SSB-205ENST00000422006 INO80Q9ULG1 1556 aaPredicted RBP11.17□□□□□ -0.62
SSB-205ENST00000422006 SEMA3EO15041 775 aa11.17□□□□□ -0.62
SSB-205ENST00000422006 KIF20AO95235 890 aa11.17□□□□□ -0.62
SSB-205ENST00000422006 WWC1Q8IX03 1113 aa11.17□□□□□ -0.62
SSB-205ENST00000422006 CCDC82Q8N4S0 544 aa11.17□□□□□ -0.62
SSB-205ENST00000422006 PRDM10Q9NQV6 1147 aa11.17□□□□□ -0.62
SSB-205ENST00000422006 LRRC7Q96NW7 1537 aa11.17□□□□□ -0.62
SSB-205ENST00000422006 IQGAP1P46940 1657 aa11.17□□□□□ -0.62
SSB-205ENST00000422006 CDC42BPBQ9Y5S2 1711 aa11.16□□□□□ -0.62
SSB-205ENST00000422006 PDE4AP27815 886 aa11.16□□□□□ -0.62
SSB-205ENST00000422006 PIP4K2BP78356 416 aa11.16□□□□□ -0.62
SSB-205ENST00000422006 STAG3Q9UJ98 1225 aa11.16□□□□□ -0.62
SSB-205ENST00000422006 ATP7AQ04656 1500 aa11.16□□□□□ -0.62
SSB-205ENST00000422006 RTEL1-TNFRSF6BF6WH68 1400 aa11.16□□□□□ -0.62
SSB-205ENST00000422006 TNRQ92752 1358 aa11.16□□□□□ -0.62
SSB-205ENST00000422006 RAD21O60216 631 aa11.16□□□□□ -0.62
SSB-205ENST00000422006 BACH2Q9BYV9 841 aa11.16□□□□□ -0.62
SSB-205ENST00000422006 ZSCAN20P17040 1043 aaPredicted RBP11.15□□□□□ -0.62
SSB-205ENST00000422006 RIPK4P57078 832 aa11.15□□□□□ -0.62
SSB-205ENST00000422006 CEP162Q5TB80 1403 aa11.15□□□□□ -0.62
SSB-205ENST00000422006 ZMYND10O75800 440 aa11.15□□□□□ -0.62
SSB-205ENST00000422006 TNNT2P45379 298 aaPredicted RBP11.15□□□□□ -0.62
SSB-205ENST00000422006 TCERG1O14776 1098 aaKnown RBP11.14□□□□□ -0.63
SSB-205ENST00000422006 MMP14P50281 582 aa11.14□□□□□ -0.63
SSB-205ENST00000422006 SIN3AQ96ST3 1273 aa11.14□□□□□ -0.63
SSB-205ENST00000422006 POGKQ9P215 609 aa11.14□□□□□ -0.63
SSB-205ENST00000422006 ESPNB1AK53 854 aa11.14□□□□□ -0.63
SSB-205ENST00000422006 KIAA1211Q6ZU35 1233 aa11.14□□□□□ -0.63
SSB-205ENST00000422006 AFAP1Q8N556 730 aa11.14□□□□□ -0.63
SSB-205ENST00000422006 RGS17Q9UGC6 210 aaPredicted RBP11.14□□□□□ -0.63
SSB-205ENST00000422006 MTMR7Q9Y216 660 aa11.13□□□□□ -0.63
SSB-205ENST00000422006 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP11.13□□□□□ -0.63
SSB-205ENST00000422006 ABCC3O15438 1527 aa11.13□□□□□ -0.63
SSB-205ENST00000422006 XRCC6P12956 609 aaKnown RBP eCLIP11.13□□□□□ -0.635e-6■□□□□ 10.3
SSB-205ENST00000422006 FGD6Q6ZV73 1430 aa11.12□□□□□ -0.63
SSB-205ENST00000422006 FOXD4L5Q5VV16 416 aaPredicted RBP11.12□□□□□ -0.63
SSB-205ENST00000422006 MTERF4Q7Z6M4 381 aaKnown RBP11.12□□□□□ -0.63
SSB-205ENST00000422006 FOXD4L4Q8WXT5 416 aaPredicted RBP11.12□□□□□ -0.63
SSB-205ENST00000422006 ERBB4Q15303 1308 aa11.11□□□□□ -0.63
SSB-205ENST00000422006 TAF3Q5VWG9 929 aa11.11□□□□□ -0.63
SSB-205ENST00000422006 ZNF772Q68DY9 489 aaPredicted RBP11.11□□□□□ -0.63
SSB-205ENST00000422006 SPAG9O60271 1321 aaKnown RBP11.11□□□□□ -0.63
SSB-205ENST00000422006 TERF1P54274 439 aa11.11□□□□□ -0.63
SSB-205ENST00000422006 GTPBP4Q9BZE4 634 aaKnown RBP11.11□□□□□ -0.63
SSB-205ENST00000422006 SLC52A1Q9NWF4 448 aa11.11□□□□□ -0.63
SSB-205ENST00000422006 LETM1O95202 739 aaPredicted RBP11.1□□□□□ -0.63
SSB-205ENST00000422006 DNTTIP2Q5QJE6 756 aaKnown RBP11.1□□□□□ -0.63
SSB-205ENST00000422006 ZC3H13Q5T200 1668 aaKnown RBP11.1□□□□□ -0.63
SSB-205ENST00000422006 CLGNO14967 610 aa11.1□□□□□ -0.63
SSB-205ENST00000422006 MS4A1P11836 297 aa11.1□□□□□ -0.63
SSB-205ENST00000422006 FAM13BQ9NYF5 915 aa11.09□□□□□ -0.63
SSB-205ENST00000422006 SSUH2Q9Y2M2 353 aa11.09□□□□□ -0.63
SSB-205ENST00000422006 UGGT1Q9NYU2 1555 aa11.09□□□□□ -0.63
SSB-205ENST00000422006 C1QBPQ07021 282 aaKnown RBP11.09□□□□□ -0.63
SSB-205ENST00000422006 HDAC5Q9UQL6 1122 aa11.09□□□□□ -0.63
SSB-205ENST00000422006 SPATA31A6Q5VVP1 1343 aa11.08□□□□□ -0.64
SSB-205ENST00000422006 JCADQ9P266 1359 aa11.08□□□□□ -0.64
SSB-205ENST00000422006 FSD2A1L4K1 749 aa11.08□□□□□ -0.64
SSB-205ENST00000422006 SLC4A3P48751 1232 aa11.08□□□□□ -0.64
SSB-205ENST00000422006 NCOA3Q9Y6Q9 1424 aa11.08□□□□□ -0.64
SSB-205ENST00000422006 MIA2Q96PC5 1412 aa11.08□□□□□ -0.64
SSB-205ENST00000422006 PANK2Q9BZ23 570 aa11.08□□□□□ -0.64
SSB-205ENST00000422006 SPDYE2BA6NHP3 402 aa11.07□□□□□ -0.64
SSB-205ENST00000422006 SPDYE6P0CI01 402 aa11.07□□□□□ -0.64
SSB-205ENST00000422006 SPDYE2Q495Y8 402 aa11.07□□□□□ -0.64
SSB-205ENST00000422006 KDM5AP29375 1690 aaKnown RBP11.07□□□□□ -0.64
SSB-205ENST00000422006 CAMSAP2Q08AD1 1489 aa11.07□□□□□ -0.64
SSB-205ENST00000422006 E9PSI1 815 aa11.07□□□□□ -0.64
SSB-205ENST00000422006 PSEN1P49768 467 aa11.07□□□□□ -0.64
SSB-205ENST00000422006 UPF1Q92900 1129 aaKnown RBP eCLIP11.07□□□□□ -0.64
SSB-205ENST00000422006 GOLGA6L3A6NEY3 463 aa11.06□□□□□ -0.64
SSB-205ENST00000422006 RIOK3O14730 519 aaKnown RBP11.06□□□□□ -0.64
SSB-205ENST00000422006 FAM193AP78312 1265 aa11.06□□□□□ -0.64
SSB-205ENST00000422006 KDM4CQ9H3R0 1056 aa11.06□□□□□ -0.64
SSB-205ENST00000422006 SLC20A2Q08357 652 aa11.06□□□□□ -0.64
SSB-205ENST00000422006 POTEAQ6S8J7 498 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms