RNA–Protein interactions for RNA: ENST00000403681.6

HMGA2-204, Transcript of high mobility group AT-hook 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HMGA2, Length 4,473 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-204ENST00000403681 CCDC39Q9UFE4 941 aa17.16■□□□□ 0.34
HMGA2-204ENST00000403681 IQGAP2Q13576 1575 aa17.15■□□□□ 0.34
HMGA2-204ENST00000403681 REC8O95072 547 aa17.15■□□□□ 0.34
HMGA2-204ENST00000403681 TESK2Q96S53 571 aa17.15■□□□□ 0.34
HMGA2-204ENST00000403681 KIF21AQ7Z4S6 1674 aa17.15■□□□□ 0.34
HMGA2-204ENST00000403681 NUTM2DQ5VT03 806 aaPredicted RBP17.15■□□□□ 0.34
HMGA2-204ENST00000403681 PLPPR3Q6T4P5 718 aa17.15■□□□□ 0.34
HMGA2-204ENST00000403681 AMER1Q5JTC6 1135 aaPredicted RBP17.15■□□□□ 0.34
HMGA2-204ENST00000403681 SLC12A5Q9H2X9 1139 aa17.15■□□□□ 0.34
HMGA2-204ENST00000403681 PZPP20742 1482 aa17.14■□□□□ 0.33
HMGA2-204ENST00000403681 PTPRGP23470 1445 aa17.14■□□□□ 0.33
HMGA2-204ENST00000403681 TRIM6-TRIM34B2RNG4 842 aa17.14■□□□□ 0.33
HMGA2-204ENST00000403681 HMMRO75330 724 aa17.14■□□□□ 0.33
HMGA2-204ENST00000403681 SPINK5Q9NQ38 1064 aaPredicted RBP17.14■□□□□ 0.33
HMGA2-204ENST00000403681 CHD1LQ86WJ1 897 aa17.14■□□□□ 0.33
HMGA2-204ENST00000403681 INTS3Q68E01 1043 aaKnown RBP17.13■□□□□ 0.33
HMGA2-204ENST00000403681 UQCRHLA0A096LP55 91 aa17.13■□□□□ 0.33
HMGA2-204ENST00000403681 UQCRHP07919 91 aa17.13■□□□□ 0.33
HMGA2-204ENST00000403681 RABEP1Q15276 862 aa17.13■□□□□ 0.33
HMGA2-204ENST00000403681 EVC2Q86UK5 1308 aa17.12■□□□□ 0.33
HMGA2-204ENST00000403681 SCAPERQ9BY12 1400 aa17.12■□□□□ 0.33
HMGA2-204ENST00000403681 CT47B1P0C2W7 299 aaPredicted RBP17.12■□□□□ 0.33
HMGA2-204ENST00000403681 C1orf115Q9H7X2 142 aa17.12■□□□□ 0.33
HMGA2-204ENST00000403681 KCNJ4P48050 445 aa17.11■□□□□ 0.33
HMGA2-204ENST00000403681 DIAPH1O60610 1272 aaKnown RBP17.11■□□□□ 0.33
HMGA2-204ENST00000403681 UHRF1BP1Q6BDS2 1440 aa17.11■□□□□ 0.33
HMGA2-204ENST00000403681 GCC1Q96CN9 775 aa17.1■□□□□ 0.33
HMGA2-204ENST00000403681 TMEM57Q8N5G2 664 aa17.1■□□□□ 0.33
HMGA2-204ENST00000403681 GOLGA6L6A8MZA4 724 aa17.1■□□□□ 0.33
HMGA2-204ENST00000403681 SSFA2P28290 1259 aa17.1■□□□□ 0.33
HMGA2-204ENST00000403681 SLC4A10Q6U841 1118 aa17.1■□□□□ 0.33
HMGA2-204ENST00000403681 API5Q9BZZ5 524 aaKnown RBP17.1■□□□□ 0.33
HMGA2-204ENST00000403681 ZRSR1Q15695 479 aaKnown RBP17.09■□□□□ 0.33
HMGA2-204ENST00000403681 PRAG1Q86YV5 1406 aa17.09■□□□□ 0.33
HMGA2-204ENST00000403681 GGNBP2Q9H3C7 697 aa17.09■□□□□ 0.33
HMGA2-204ENST00000403681 CTTNBP2Q8WZ74 1663 aa17.08■□□□□ 0.32
HMGA2-204ENST00000403681 TNNQ9UQP3 1299 aa17.08■□□□□ 0.32
HMGA2-204ENST00000403681 MBD3O95983 291 aa17.08■□□□□ 0.32
HMGA2-204ENST00000403681 KDM6BO15054 1643 aa17.08■□□□□ 0.32
HMGA2-204ENST00000403681 RLBP1P12271 317 aa17.08■□□□□ 0.32
HMGA2-204ENST00000403681 LMOD3Q0VAK6 560 aa17.08■□□□□ 0.32
HMGA2-204ENST00000403681 OS9Q13438 667 aaPredicted RBP17.08■□□□□ 0.32
HMGA2-204ENST00000403681 SSH1Q8WYL5 1049 aa17.08■□□□□ 0.32
HMGA2-204ENST00000403681 BLMP54132 1417 aaPredicted RBP17.07■□□□□ 0.32
HMGA2-204ENST00000403681 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.07■□□□□ 0.323e-8■■□□□ 13.7
HMGA2-204ENST00000403681 GPATCH8Q9UKJ3 1502 aaKnown RBP17.07■□□□□ 0.32
HMGA2-204ENST00000403681 ZMYM4Q5VZL5 1548 aa17.07■□□□□ 0.32
HMGA2-204ENST00000403681 XPCQ01831 940 aaPredicted RBP17.06■□□□□ 0.32
HMGA2-204ENST00000403681 RILPL2Q969X0 211 aa17.06■□□□□ 0.32
HMGA2-204ENST00000403681 TMEM132EQ6IEE7 984 aa17.06■□□□□ 0.32
HMGA2-204ENST00000403681 INSRP06213 1382 aa17.06■□□□□ 0.32
HMGA2-204ENST00000403681 KIAA0586Q9BVV6 1533 aa17.06■□□□□ 0.32
HMGA2-204ENST00000403681 CWC22Q9HCG8 908 aaKnown RBP17.06■□□□□ 0.32
HMGA2-204ENST00000403681 KDM5BQ9UGL1 1544 aa17.05■□□□□ 0.32
HMGA2-204ENST00000403681 TRIM27P14373 513 aa17.05■□□□□ 0.32
HMGA2-204ENST00000403681 MPNDQ8N594 471 aa17.05■□□□□ 0.32
HMGA2-204ENST00000403681 GCC2Q8IWJ2 1684 aa17.05■□□□□ 0.32
HMGA2-204ENST00000403681 ARHGEF12Q9NZN5 1544 aa17.05■□□□□ 0.32
HMGA2-204ENST00000403681 A0A0U1RQG5 324 aaPredicted RBP17.04■□□□□ 0.32
HMGA2-204ENST00000403681 GPRASP1Q5JY77 1395 aa17.04■□□□□ 0.32
HMGA2-204ENST00000403681 PLB1Q6P1J6 1458 aa17.04■□□□□ 0.32
HMGA2-204ENST00000403681 KIF14Q15058 1648 aa17.03■□□□□ 0.32
HMGA2-204ENST00000403681 ARHGEF11O15085 1522 aa17.03■□□□□ 0.32
HMGA2-204ENST00000403681 NEK4P51957 841 aa17.03■□□□□ 0.32
HMGA2-204ENST00000403681 TSPY26PQ9H489 355 aa17.03■□□□□ 0.32
HMGA2-204ENST00000403681 MAGI3Q5TCQ9 1506 aa17.03■□□□□ 0.32
HMGA2-204ENST00000403681 ANO2Q9NQ90 1003 aa17.03■□□□□ 0.32
HMGA2-204ENST00000403681 HMGN5P82970 282 aaKnown RBP17.02■□□□□ 0.32
HMGA2-204ENST00000403681 KLHL40Q2TBA0 621 aa17.02■□□□□ 0.32
HMGA2-204ENST00000403681 SOX12O15370 315 aa17.02■□□□□ 0.32
HMGA2-204ENST00000403681 BAG4O95429 457 aaKnown RBP17.02■□□□□ 0.32
HMGA2-204ENST00000403681 GNAI1P63096 354 aa17.02■□□□□ 0.32
HMGA2-204ENST00000403681 CABP2Q9NPB3 220 aa17.02■□□□□ 0.31
HMGA2-204ENST00000403681 RTF1Q92541 710 aaKnown RBP17.02■□□□□ 0.31
HMGA2-204ENST00000403681 GRIN2AQ12879 1464 aa17.01■□□□□ 0.31
HMGA2-204ENST00000403681 DMRT2Q9Y5R5 561 aa17.01■□□□□ 0.31
HMGA2-204ENST00000403681 NRDCO43847 1150 aa17.01■□□□□ 0.31
HMGA2-204ENST00000403681 ATP6V1DQ9Y5K8 247 aa17.01■□□□□ 0.31
HMGA2-204ENST00000403681 NSD3Q9BZ95 1437 aa17.01■□□□□ 0.31
HMGA2-204ENST00000403681 SYCE3A1L190 88 aa17■□□□□ 0.31
HMGA2-204ENST00000403681 TMPOP42166 694 aaKnown RBP17■□□□□ 0.31
HMGA2-204ENST00000403681 ZNF771Q7L3S4 317 aaPredicted RBP17■□□□□ 0.31
HMGA2-204ENST00000403681 HMOX1P09601 288 aa17■□□□□ 0.31
HMGA2-204ENST00000403681 HDAC1Q13547 482 aaPredicted RBP17■□□□□ 0.31
HMGA2-204ENST00000403681 SNX21Q969T3 373 aa17■□□□□ 0.31
HMGA2-204ENST00000403681 PODXL2Q9NZ53 605 aa17■□□□□ 0.31
HMGA2-204ENST00000403681 ARHGAP5Q13017 1502 aa17■□□□□ 0.31
HMGA2-204ENST00000403681 COL17A1Q9UMD9 1497 aaPredicted RBP17■□□□□ 0.31
HMGA2-204ENST00000403681 FGD1P98174 961 aa17■□□□□ 0.31
HMGA2-204ENST00000403681 AFAP1Q8N556 730 aa17■□□□□ 0.31
HMGA2-204ENST00000403681 CCDC141Q6ZP82 1450 aa16.99■□□□□ 0.31
HMGA2-204ENST00000403681 MINK1Q8N4C8 1332 aaPredicted RBP16.99■□□□□ 0.31
HMGA2-204ENST00000403681 BMP2KLQ5H9B9 411 aa16.99■□□□□ 0.31
HMGA2-204ENST00000403681 STK31Q9BXU1 1019 aa16.99■□□□□ 0.31
HMGA2-204ENST00000403681 DIAPH3Q9NSV4 1193 aa16.99■□□□□ 0.31
HMGA2-204ENST00000403681 DNMT1P26358 1616 aaKnown RBP16.99■□□□□ 0.31
HMGA2-204ENST00000403681 DENND4BO75064 1496 aaPredicted RBP16.98■□□□□ 0.31
HMGA2-204ENST00000403681 VGFO15240 615 aaPredicted RBP16.98■□□□□ 0.31
HMGA2-204ENST00000403681 SMC5Q8IY18 1101 aa16.98■□□□□ 0.31
HMGA2-204ENST00000403681 ABCA5Q8WWZ7 1642 aa16.98■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms