RNA–Protein interactions for RNA: ENST00000399903.6

PTPRA-205, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

TSL 5 BASIC

Gene PTPRA, Length 3,337 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-205ENST00000399903 SCAF11Q99590 1463 aaKnown RBP21.72■■□□□ 1.07
PTPRA-205ENST00000399903 TET3O43151 1660 aa21.72■■□□□ 1.07
PTPRA-205ENST00000399903 EIF2AK4Q9P2K8 1649 aaKnown RBP21.72■■□□□ 1.07
PTPRA-205ENST00000399903 TRAK2O60296 914 aa21.72■■□□□ 1.07
PTPRA-205ENST00000399903 PPP2R1AP30153 589 aa21.71■■□□□ 1.07
PTPRA-205ENST00000399903 MCM4P33991 863 aa21.71■■□□□ 1.07
PTPRA-205ENST00000399903 AMER1Q5JTC6 1135 aaPredicted RBP21.7■■□□□ 1.06
PTPRA-205ENST00000399903 CLUAP1Q96AJ1 413 aa21.7■■□□□ 1.06
PTPRA-205ENST00000399903 BCL2L13Q9BXK5 485 aa21.7■■□□□ 1.06
PTPRA-205ENST00000399903 MFAP1P55081 439 aaKnown RBP21.69■■□□□ 1.06
PTPRA-205ENST00000399903 CEP152O94986 1710 aa21.69■■□□□ 1.06
PTPRA-205ENST00000399903 YEATS2Q9ULM3 1422 aa21.69■■□□□ 1.06
PTPRA-205ENST00000399903 DEPDC5O75140 1603 aa21.69■■□□□ 1.06
PTPRA-205ENST00000399903 FBXO31Q5XUX0 539 aaPredicted RBP21.69■■□□□ 1.06
PTPRA-205ENST00000399903 PPRC1Q5VV67 1664 aaKnown RBP21.68■■□□□ 1.06
PTPRA-205ENST00000399903 SLC12A5Q9H2X9 1139 aa21.68■■□□□ 1.06
PTPRA-205ENST00000399903 ESPNB1AK53 854 aa21.67■■□□□ 1.06
PTPRA-205ENST00000399903 CARD14Q9BXL6 1004 aa21.67■■□□□ 1.06
PTPRA-205ENST00000399903 IDI1Q13907 227 aa21.67■■□□□ 1.06
PTPRA-205ENST00000399903 SLFN5Q08AF3 891 aa21.66■■□□□ 1.06
PTPRA-205ENST00000399903 VWDEQ8N2E2 1590 aa21.65■■□□□ 1.06
PTPRA-205ENST00000399903 CDCA8Q53HL2 280 aa21.65■■□□□ 1.06
PTPRA-205ENST00000399903 ANTXR1Q9H6X2 564 aa21.65■■□□□ 1.06
PTPRA-205ENST00000399903 EFCAB6Q5THR3 1501 aa21.65■■□□□ 1.06
PTPRA-205ENST00000399903 FRMPD1Q5SYB0 1578 aa21.64■■□□□ 1.06
PTPRA-205ENST00000399903 MAPK8IP3Q9UPT6 1336 aa21.64■■□□□ 1.05
PTPRA-205ENST00000399903 GRPEL1Q9HAV7 217 aa21.63■■□□□ 1.05
PTPRA-205ENST00000399903 FOXD4L1Q9NU39 408 aa21.63■■□□□ 1.05
PTPRA-205ENST00000399903 EIF3AQ14152 1382 aaKnown RBP21.63■■□□□ 1.05
PTPRA-205ENST00000399903 BLMP54132 1417 aaPredicted RBP21.63■■□□□ 1.05
PTPRA-205ENST00000399903 CENPJQ9HC77 1338 aaPredicted RBP21.63■■□□□ 1.05
PTPRA-205ENST00000399903 MRE11P49959 708 aa21.62■■□□□ 1.05
PTPRA-205ENST00000399903 DMRT2Q9Y5R5 561 aa21.62■■□□□ 1.05
PTPRA-205ENST00000399903 RNF17Q9BXT8 1623 aaKnown RBP21.62■■□□□ 1.05
PTPRA-205ENST00000399903 RBM10P98175 930 aaKnown RBP21.62■■□□□ 1.05
PTPRA-205ENST00000399903 ERBB4Q15303 1308 aa21.62■■□□□ 1.05
PTPRA-205ENST00000399903 MROH2AA6NES4 1674 aa21.61■■□□□ 1.05
PTPRA-205ENST00000399903 TNNQ9UQP3 1299 aa21.6■■□□□ 1.05
PTPRA-205ENST00000399903 RRP7AQ9Y3A4 280 aaKnown RBP21.6■■□□□ 1.05
PTPRA-205ENST00000399903 ZMYM4Q5VZL5 1548 aa21.6■■□□□ 1.05
PTPRA-205ENST00000399903 ABCA6Q8N139 1617 aa21.59■■□□□ 1.05
PTPRA-205ENST00000399903 PDZRN3Q9UPQ7 1066 aa21.59■■□□□ 1.05
PTPRA-205ENST00000399903 MLH3Q9UHC1 1453 aa21.59■■□□□ 1.05
PTPRA-205ENST00000399903 TBC1D32Q96NH3 1257 aa21.58■■□□□ 1.05
PTPRA-205ENST00000399903 FSD2A1L4K1 749 aa21.58■■□□□ 1.05
PTPRA-205ENST00000399903 CABP2Q9NPB3 220 aa21.58■■□□□ 1.05
PTPRA-205ENST00000399903 CHMP5Q9NZZ3 219 aa21.58■■□□□ 1.04
PTPRA-205ENST00000399903 STAG3Q9UJ98 1225 aa21.58■■□□□ 1.04
PTPRA-205ENST00000399903 LAMC1P11047 1609 aa21.57■■□□□ 1.04
PTPRA-205ENST00000399903 CGNL1Q0VF96 1302 aa21.57■■□□□ 1.04
PTPRA-205ENST00000399903 HECW2Q9P2P5 1572 aa21.57■■□□□ 1.04
PTPRA-205ENST00000399903 PLPPR3Q6T4P5 718 aa21.57■■□□□ 1.04
PTPRA-205ENST00000399903 C14orf93Q9H972 538 aaKnown RBP21.57■■□□□ 1.04
PTPRA-205ENST00000399903 STAC3Q96MF2 364 aa21.57■■□□□ 1.04
PTPRA-205ENST00000399903 IQGAP1P46940 1657 aa21.56■■□□□ 1.04
PTPRA-205ENST00000399903 ERVK-7P63135 1459 aa21.56■■□□□ 1.04
PTPRA-205ENST00000399903 MAP3K4Q9Y6R4 1608 aa21.55■■□□□ 1.04
PTPRA-205ENST00000399903 KIF1BO60333 1816 aa21.55■■□□□ 1.04
PTPRA-205ENST00000399903 HSCBQ8IWL3 235 aa21.54■■□□□ 1.04
PTPRA-205ENST00000399903 C22orf23Q9BZE7 217 aa21.54■■□□□ 1.04
PTPRA-205ENST00000399903 KIAA1211Q6ZU35 1233 aa21.54■■□□□ 1.04
PTPRA-205ENST00000399903 PCDHB15Q9Y5E8 787 aa21.54■■□□□ 1.04
PTPRA-205ENST00000399903 ABCC3O15438 1527 aa21.53■■□□□ 1.04
PTPRA-205ENST00000399903 E9PSI1 815 aa21.52■■□□□ 1.04
PTPRA-205ENST00000399903 PODXL2Q9NZ53 605 aa21.52■■□□□ 1.04
PTPRA-205ENST00000399903 ZBTB7CA1YPR0 619 aa21.52■■□□□ 1.03
PTPRA-205ENST00000399903 MINK1Q8N4C8 1332 aaPredicted RBP21.52■■□□□ 1.03
PTPRA-205ENST00000399903 TSPOAP1O95153 1857 aa21.51■■□□□ 1.03
PTPRA-205ENST00000399903 FAM13BQ9NYF5 915 aa21.51■■□□□ 1.03
PTPRA-205ENST00000399903 MORC1Q86VD1 984 aa21.5■■□□□ 1.03
PTPRA-205ENST00000399903 VGFO15240 615 aaPredicted RBP21.5■■□□□ 1.03
PTPRA-205ENST00000399903 A0A0U1RQG5 324 aaPredicted RBP21.49■■□□□ 1.03
PTPRA-205ENST00000399903 SRPK2P78362 688 aaKnown RBP21.49■■□□□ 1.03
PTPRA-205ENST00000399903 PMFBP1Q8TBY8 1022 aa21.49■■□□□ 1.03
PTPRA-205ENST00000399903 ZNF521Q96K83 1311 aa21.49■■□□□ 1.03
PTPRA-205ENST00000399903 PLEKHG5O94827 1062 aa21.49■■□□□ 1.03
PTPRA-205ENST00000399903 GAS2L3Q86XJ1 694 aa21.49■■□□□ 1.03
PTPRA-205ENST00000399903 ASXL1Q8IXJ9 1541 aa21.48■■□□□ 1.03
PTPRA-205ENST00000399903 MYOM2P54296 1465 aa21.48■■□□□ 1.03
PTPRA-205ENST00000399903 RLBP1P12271 317 aa21.48■■□□□ 1.03
PTPRA-205ENST00000399903 NEO1Q92859 1461 aa21.48■■□□□ 1.03
PTPRA-205ENST00000399903 NSD3Q9BZ95 1437 aa21.47■■□□□ 1.03
PTPRA-205ENST00000399903 HSP90AB1P08238 724 aaKnown RBP21.47■■□□□ 1.03
PTPRA-205ENST00000399903 NKTRP30414 1462 aaKnown RBP21.47■■□□□ 1.03
PTPRA-205ENST00000399903 ADGRB3O60242 1522 aa21.47■■□□□ 1.03
PTPRA-205ENST00000399903 DDX11L8A8MPP1 907 aa21.47■■□□□ 1.03
PTPRA-205ENST00000399903 NCLP19338 710 aaKnown RBP21.47■■□□□ 1.03
PTPRA-205ENST00000399903 DIP2CQ9Y2E4 1556 aa21.47■■□□□ 1.03
PTPRA-205ENST00000399903 PIK3C2GO75747 1445 aa21.46■■□□□ 1.03
PTPRA-205ENST00000399903 PDE3AQ14432 1141 aa21.46■■□□□ 1.03
PTPRA-205ENST00000399903 ANP32BQ92688 251 aaKnown RBP21.46■■□□□ 1.03
PTPRA-205ENST00000399903 SIGLEC1Q9BZZ2 1709 aa21.45■■□□□ 1.02
PTPRA-205ENST00000399903 LMTK2Q8IWU2 1503 aa21.45■■□□□ 1.02
PTPRA-205ENST00000399903 RWDD1Q9H446 243 aaPredicted RBP21.45■■□□□ 1.02
PTPRA-205ENST00000399903 MSNP26038 577 aaKnown RBP21.44■■□□□ 1.02
PTPRA-205ENST00000399903 PRAM1Q96QH2 718 aa21.44■■□□□ 1.02
PTPRA-205ENST00000399903 FTSJ3Q8IY81 847 aaKnown RBP21.42■■□□□ 1.02
PTPRA-205ENST00000399903 R3HCC1Q9Y3T6 440 aaKnown RBP21.42■■□□□ 1.02
PTPRA-205ENST00000399903 CFAP74Q9C0B2 1584 aa21.42■■□□□ 1.02
PTPRA-205ENST00000399903 PDCL3Q9H2J4 239 aa21.42■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms