RNA–Protein interactions for RNA: ENST00000397821.7

SH3KBP1-205, Transcript of SH3 domain containing kinase binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SH3KBP1, Length 4,731 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3KBP1-205ENST00000397821 ARGLU1Q9NWB6 273 aaPredicted RBP17.47■□□□□ 0.39
SH3KBP1-205ENST00000397821 UQCRHLA0A096LP55 91 aa17.46■□□□□ 0.39
SH3KBP1-205ENST00000397821 UQCRHP07919 91 aa17.46■□□□□ 0.39
SH3KBP1-205ENST00000397821 TRIM5Q9C035 493 aa17.46■□□□□ 0.39
SH3KBP1-205ENST00000397821 HMOX1P09601 288 aa17.46■□□□□ 0.39
SH3KBP1-205ENST00000397821 SETQ01105 290 aaPredicted RBP17.46■□□□□ 0.39
SH3KBP1-205ENST00000397821 TSR1Q2NL82 804 aaKnown RBP17.46■□□□□ 0.39
SH3KBP1-205ENST00000397821 TOP2BQ02880 1626 aa17.46■□□□□ 0.39
SH3KBP1-205ENST00000397821 CSB-PGBD3P0DP91 1061 aa17.46■□□□□ 0.38
SH3KBP1-205ENST00000397821 CCDC27Q2M243 656 aa17.46■□□□□ 0.38
SH3KBP1-205ENST00000397821 TPM1P09493 284 aa17.45■□□□□ 0.38
SH3KBP1-205ENST00000397821 CHMP4CQ96CF2 233 aa17.45■□□□□ 0.38
SH3KBP1-205ENST00000397821 GGNBP2Q9H3C7 697 aa17.45■□□□□ 0.38
SH3KBP1-205ENST00000397821 IFIT2P09913 472 aaKnown RBP17.45■□□□□ 0.38
SH3KBP1-205ENST00000397821 CCDC73Q6ZRK6 1079 aa17.45■□□□□ 0.38
SH3KBP1-205ENST00000397821 K7ELQ4 463 aaPredicted RBP17.45■□□□□ 0.38
SH3KBP1-205ENST00000397821 VGFO15240 615 aaPredicted RBP17.45■□□□□ 0.38
SH3KBP1-205ENST00000397821 EIF2S2P20042 333 aaKnown RBP17.45■□□□□ 0.38
SH3KBP1-205ENST00000397821 C1orf115Q9H7X2 142 aa17.45■□□□□ 0.38
SH3KBP1-205ENST00000397821 ANKRD50Q9ULJ7 1429 aa17.44■□□□□ 0.38
SH3KBP1-205ENST00000397821 NCOA2Q15596 1464 aa17.44■□□□□ 0.38
SH3KBP1-205ENST00000397821 RNF20Q5VTR2 975 aa17.44■□□□□ 0.38
SH3KBP1-205ENST00000397821 C9orf78Q9NZ63 289 aaPredicted RBP17.44■□□□□ 0.38
SH3KBP1-205ENST00000397821 FIBPO43427 364 aa17.44■□□□□ 0.38
SH3KBP1-205ENST00000397821 ZSCAN30Q86W11 494 aa17.44■□□□□ 0.38
SH3KBP1-205ENST00000397821 C20orf194Q5TEA3 1177 aa17.43■□□□□ 0.38
SH3KBP1-205ENST00000397821 TSR2Q969E8 191 aaKnown RBP17.43■□□□□ 0.38
SH3KBP1-205ENST00000397821 C11orf95C9JLR9 678 aaPredicted RBP17.43■□□□□ 0.38
SH3KBP1-205ENST00000397821 SPC24Q8NBT2 197 aa17.43■□□□□ 0.38
SH3KBP1-205ENST00000397821 CIZ1Q9ULV3 898 aaPredicted RBP17.42■□□□□ 0.38
SH3KBP1-205ENST00000397821 CCDC66A2RUB6 948 aa17.42■□□□□ 0.38
SH3KBP1-205ENST00000397821 FOSBP53539 338 aa17.42■□□□□ 0.38
SH3KBP1-205ENST00000397821 PDE4CQ08493 712 aa17.42■□□□□ 0.38
SH3KBP1-205ENST00000397821 CPLX2Q6PUV4 134 aaKnown RBP17.42■□□□□ 0.38
SH3KBP1-205ENST00000397821 CPLX1O14810 134 aa17.41■□□□□ 0.38
SH3KBP1-205ENST00000397821 PRXQ9BXM0 1461 aa17.41■□□□□ 0.38
SH3KBP1-205ENST00000397821 ZSCAN21Q9Y5A6 473 aaPredicted RBP17.41■□□□□ 0.38
SH3KBP1-205ENST00000397821 CUX1P39880 1505 aa17.41■□□□□ 0.38
SH3KBP1-205ENST00000397821 MCM2P49736 904 aa17.4■□□□□ 0.38
SH3KBP1-205ENST00000397821 GCC1Q96CN9 775 aa17.4■□□□□ 0.38
SH3KBP1-205ENST00000397821 SDF4Q9BRK5 362 aa17.4■□□□□ 0.38
SH3KBP1-205ENST00000397821 NOB1Q9ULX3 412 aaKnown RBP17.39■□□□□ 0.38
SH3KBP1-205ENST00000397821 LETM1O95202 739 aaPredicted RBP17.39■□□□□ 0.37
SH3KBP1-205ENST00000397821 TEFQ10587 303 aa17.39■□□□□ 0.37
SH3KBP1-205ENST00000397821 CCDC70Q6NSX1 233 aa17.39■□□□□ 0.37
SH3KBP1-205ENST00000397821 CWC22Q9HCG8 908 aaKnown RBP17.39■□□□□ 0.37
SH3KBP1-205ENST00000397821 MVPQ14764 893 aaKnown RBP17.39■□□□□ 0.37
SH3KBP1-205ENST00000397821 CASKIN1Q8WXD9 1431 aa17.38■□□□□ 0.37
SH3KBP1-205ENST00000397821 IPO7O95373 1038 aaKnown RBP17.38■□□□□ 0.37
SH3KBP1-205ENST00000397821 PODXL2Q9NZ53 605 aa17.38■□□□□ 0.37
SH3KBP1-205ENST00000397821 HSP90B2PQ58FF3 399 aa17.37■□□□□ 0.37
SH3KBP1-205ENST00000397821 HFM1A2PYH4 1435 aa17.37■□□□□ 0.37
SH3KBP1-205ENST00000397821 ATF7IPQ6VMQ6 1270 aa17.36■□□□□ 0.37
SH3KBP1-205ENST00000397821 CC2D2AQ9P2K1 1620 aa17.36■□□□□ 0.37
SH3KBP1-205ENST00000397821 STAC3Q96MF2 364 aa17.36■□□□□ 0.37
SH3KBP1-205ENST00000397821 TSPYL4Q9UJ04 414 aa17.36■□□□□ 0.37
SH3KBP1-205ENST00000397821 ERC2O15083 957 aa17.35■□□□□ 0.37
SH3KBP1-205ENST00000397821 SLFN5Q08AF3 891 aa17.35■□□□□ 0.37
SH3KBP1-205ENST00000397821 G3BP1Q13283 466 aaKnown RBP eCLIP17.35■□□□□ 0.37
SH3KBP1-205ENST00000397821 CFAP70Q5T0N1 1121 aa17.35■□□□□ 0.37
SH3KBP1-205ENST00000397821 FYCO1Q9BQS8 1478 aa17.35■□□□□ 0.37
SH3KBP1-205ENST00000397821 TRIM29Q14134 588 aa17.35■□□□□ 0.37
SH3KBP1-205ENST00000397821 AKAP17AQ02040 695 aaKnown RBP17.35■□□□□ 0.37
SH3KBP1-205ENST00000397821 TBC1D2Q9BYX2 928 aa17.35■□□□□ 0.37
SH3KBP1-205ENST00000397821 CHD1LQ86WJ1 897 aa17.34■□□□□ 0.37
SH3KBP1-205ENST00000397821 FMNL2Q96PY5 1086 aa17.34■□□□□ 0.37
SH3KBP1-205ENST00000397821 PEG3Q9GZU2 1588 aa17.34■□□□□ 0.37
SH3KBP1-205ENST00000397821 NEXNQ0ZGT2 675 aa17.34■□□□□ 0.37
SH3KBP1-205ENST00000397821 UBE2Q2Q8WVN8 375 aa17.34■□□□□ 0.37
SH3KBP1-205ENST00000397821 HSP90AB4PQ58FF6 505 aa17.34■□□□□ 0.37
SH3KBP1-205ENST00000397821 TMEM132EQ6IEE7 984 aa17.34■□□□□ 0.37
SH3KBP1-205ENST00000397821 NINLQ9Y2I6 1382 aa17.34■□□□□ 0.37
SH3KBP1-205ENST00000397821 NOM1Q5C9Z4 860 aaKnown RBP17.33■□□□□ 0.37
SH3KBP1-205ENST00000397821 CCDC112Q8NEF3 446 aa17.33■□□□□ 0.37
SH3KBP1-205ENST00000397821 CABP2Q9NPB3 220 aa17.33■□□□□ 0.37
SH3KBP1-205ENST00000397821 SYNE3Q6ZMZ3 975 aa17.33■□□□□ 0.37
SH3KBP1-205ENST00000397821 NAT10Q9H0A0 1025 aaKnown RBP17.33■□□□□ 0.37
SH3KBP1-205ENST00000397821 NESP48681 1621 aa17.32■□□□□ 0.36
SH3KBP1-205ENST00000397821 UBTFL1P0CB47 393 aaPredicted RBP17.32■□□□□ 0.36
SH3KBP1-205ENST00000397821 PRKAR2BP31323 418 aa17.32■□□□□ 0.36
SH3KBP1-205ENST00000397821 ANKRD20A12PQ8NF67 263 aa17.32■□□□□ 0.36
SH3KBP1-205ENST00000397821 SYCE3A1L190 88 aa17.32■□□□□ 0.36
SH3KBP1-205ENST00000397821 SURF6O75683 361 aaKnown RBP17.32■□□□□ 0.36
SH3KBP1-205ENST00000397821 TWISTNBQ3B726 338 aaPredicted RBP17.32■□□□□ 0.36
SH3KBP1-205ENST00000397821 CCDC192P0DO97 292 aa17.31■□□□□ 0.36
SH3KBP1-205ENST00000397821 PDCP20941 246 aa17.31■□□□□ 0.36
SH3KBP1-205ENST00000397821 WDR63Q8IWG1 891 aa17.31■□□□□ 0.36
SH3KBP1-205ENST00000397821 KINO60870 393 aaKnown RBP17.31■□□□□ 0.36
SH3KBP1-205ENST00000397821 PDILTQ8N807 584 aa17.31■□□□□ 0.36
SH3KBP1-205ENST00000397821 PCMTD1Q96MG8 357 aaPredicted RBP17.31■□□□□ 0.36
SH3KBP1-205ENST00000397821 ACBD3Q9H3P7 528 aa17.31■□□□□ 0.36
SH3KBP1-205ENST00000397821 PRDM10Q9NQV6 1147 aa17.31■□□□□ 0.36
SH3KBP1-205ENST00000397821 HOOK1Q9UJC3 728 aaKnown RBP17.31■□□□□ 0.36
SH3KBP1-205ENST00000397821 WDR33Q9C0J8 1336 aaKnown RBP17.31■□□□□ 0.36
SH3KBP1-205ENST00000397821 SLC12A5Q9H2X9 1139 aa17.3■□□□□ 0.36
SH3KBP1-205ENST00000397821 XPCQ01831 940 aaPredicted RBP17.3■□□□□ 0.36
SH3KBP1-205ENST00000397821 PATL2C9JE40 543 aaKnown RBP17.3■□□□□ 0.36
SH3KBP1-205ENST00000397821 PDCL3Q9H2J4 239 aa17.3■□□□□ 0.36
SH3KBP1-205ENST00000397821 CWC15Q9P013 229 aaKnown RBP17.3■□□□□ 0.36
SH3KBP1-205ENST00000397821 SMC2O95347 1197 aa17.29■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms