RNA–Protein interactions for RNA: ENST00000374879.4

TMEFF1-201, Transcript of transmembrane protein with EGF like and two follistatin like domains 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEFF1, Length 2,611 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEFF1-201ENST00000374879 PMFBP1Q8TBY8 1022 aa25.94■■□□□ 1.74
TMEFF1-201ENST00000374879 MFAP1P55081 439 aaKnown RBP25.94■■□□□ 1.74
TMEFF1-201ENST00000374879 CCDC173Q0VFZ6 552 aa25.94■■□□□ 1.74
TMEFF1-201ENST00000374879 E9PSI1 815 aa25.93■■□□□ 1.74
TMEFF1-201ENST00000374879 PDZRN4Q6ZMN7 1036 aaPredicted RBP25.93■■□□□ 1.74
TMEFF1-201ENST00000374879 TNPO1Q92973 898 aaKnown RBP25.93■■□□□ 1.74
TMEFF1-201ENST00000374879 PPP1R9BQ96SB3 815 aa25.93■■□□□ 1.74
TMEFF1-201ENST00000374879 ZMYM3Q14202 1370 aa25.92■■□□□ 1.74
TMEFF1-201ENST00000374879 MAP7D2Q96T17 732 aa25.92■■□□□ 1.74
TMEFF1-201ENST00000374879 TERF1P54274 439 aa25.91■■□□□ 1.74
TMEFF1-201ENST00000374879 HSCBQ8IWL3 235 aa25.91■■□□□ 1.74
TMEFF1-201ENST00000374879 R3HCC1Q9Y3T6 440 aaKnown RBP25.91■■□□□ 1.74
TMEFF1-201ENST00000374879 RNF17Q9BXT8 1623 aaKnown RBP25.9■■□□□ 1.74
TMEFF1-201ENST00000374879 DDIT3P35638 169 aa25.9■■□□□ 1.74
TMEFF1-201ENST00000374879 MSNP26038 577 aaKnown RBP25.9■■□□□ 1.74
TMEFF1-201ENST00000374879 SPAG9O60271 1321 aaKnown RBP25.89■■□□□ 1.74
TMEFF1-201ENST00000374879 UHRF1BP1LA0JNW5 1464 aa25.88■■□□□ 1.73
TMEFF1-201ENST00000374879 NASPP49321 788 aaPredicted RBP25.88■■□□□ 1.73
TMEFF1-201ENST00000374879 AFAP1Q8N556 730 aa25.88■■□□□ 1.73
TMEFF1-201ENST00000374879 KNSTRNQ9Y448 316 aa25.88■■□□□ 1.73
TMEFF1-201ENST00000374879 NINLQ9Y2I6 1382 aa25.87■■□□□ 1.73
TMEFF1-201ENST00000374879 ARID3AQ99856 593 aa25.86■■□□□ 1.73
TMEFF1-201ENST00000374879 SMAP1Q8IYB5 467 aaPredicted RBP25.85■■□□□ 1.73
TMEFF1-201ENST00000374879 SKOR2Q2VWA4 1001 aaPredicted RBP25.85■■□□□ 1.73
TMEFF1-201ENST00000374879 TNNQ9UQP3 1299 aa25.84■■□□□ 1.73
TMEFF1-201ENST00000374879 NCOA3Q9Y6Q9 1424 aa25.84■■□□□ 1.73
TMEFF1-201ENST00000374879 FGD1P98174 961 aa25.84■■□□□ 1.73
TMEFF1-201ENST00000374879 GBP4Q96PP9 640 aa25.84■■□□□ 1.73
TMEFF1-201ENST00000374879 MADDQ8WXG6 1647 aa25.84■■□□□ 1.73
TMEFF1-201ENST00000374879 AMER1Q5JTC6 1135 aaPredicted RBP25.84■■□□□ 1.73
TMEFF1-201ENST00000374879 RLBP1P12271 317 aa25.83■■□□□ 1.73
TMEFF1-201ENST00000374879 TRPM2O94759 1503 aa25.81■■□□□ 1.72
TMEFF1-201ENST00000374879 ZFYVE16Q7Z3T8 1539 aa25.81■■□□□ 1.72
TMEFF1-201ENST00000374879 UQCRHLA0A096LP55 91 aa25.81■■□□□ 1.72
TMEFF1-201ENST00000374879 UQCRHP07919 91 aa25.81■■□□□ 1.72
TMEFF1-201ENST00000374879 ANP32BQ92688 251 aaKnown RBP25.81■■□□□ 1.72
TMEFF1-201ENST00000374879 RWDD1Q9H446 243 aaPredicted RBP25.81■■□□□ 1.72
TMEFF1-201ENST00000374879 ZHX1Q9UKY1 873 aaPredicted RBP25.81■■□□□ 1.72
TMEFF1-201ENST00000374879 WDR7Q9Y4E6 1490 aa25.8■■□□□ 1.72
TMEFF1-201ENST00000374879 PRDM10Q9NQV6 1147 aa25.8■■□□□ 1.72
TMEFF1-201ENST00000374879 RAB3GAP1Q15042 981 aa25.8■■□□□ 1.72
TMEFF1-201ENST00000374879 IQGAP1P46940 1657 aa25.79■■□□□ 1.72
TMEFF1-201ENST00000374879 SMC5Q8IY18 1101 aa25.77■■□□□ 1.72
TMEFF1-201ENST00000374879 SPHKAPQ2M3C7 1700 aa25.77■■□□□ 1.72
TMEFF1-201ENST00000374879 PTPRTO14522 1441 aa25.77■■□□□ 1.72
TMEFF1-201ENST00000374879 CEP152O94986 1710 aa25.76■■□□□ 1.71
TMEFF1-201ENST00000374879 XPCQ01831 940 aaPredicted RBP25.76■■□□□ 1.71
TMEFF1-201ENST00000374879 CLTCL1P53675 1640 aa25.75■■□□□ 1.71
TMEFF1-201ENST00000374879 CIZ1Q9ULV3 898 aaPredicted RBP25.75■■□□□ 1.71
TMEFF1-201ENST00000374879 ARAP3Q8WWN8 1544 aa25.75■■□□□ 1.71
TMEFF1-201ENST00000374879 SCAF11Q99590 1463 aaKnown RBP25.75■■□□□ 1.71
TMEFF1-201ENST00000374879 PIK3C2GO75747 1445 aa25.75■■□□□ 1.71
TMEFF1-201ENST00000374879 RARSP54136 660 aaKnown RBP25.74■■□□□ 1.71
TMEFF1-201ENST00000374879 CDCA8Q53HL2 280 aa25.73■■□□□ 1.71
TMEFF1-201ENST00000374879 STAC3Q96MF2 364 aa25.73■■□□□ 1.71
TMEFF1-201ENST00000374879 HSP90AB1P08238 724 aaKnown RBP25.73■■□□□ 1.71
TMEFF1-201ENST00000374879 PTMSP20962 102 aa25.73■■□□□ 1.71
TMEFF1-201ENST00000374879 SNX21Q969T3 373 aa25.73■■□□□ 1.71
TMEFF1-201ENST00000374879 EIF2AK3Q9NZJ5 1116 aaKnown RBP25.73■■□□□ 1.71
TMEFF1-201ENST00000374879 DEPDC5O75140 1603 aa25.73■■□□□ 1.71
TMEFF1-201ENST00000374879 SCAPERQ9BY12 1400 aa25.72■■□□□ 1.71
TMEFF1-201ENST00000374879 ZNF500O60304 480 aaPredicted RBP25.72■■□□□ 1.71
TMEFF1-201ENST00000374879 BCL2L13Q9BXK5 485 aa25.72■■□□□ 1.71
TMEFF1-201ENST00000374879 FOXD4L1Q9NU39 408 aa25.72■■□□□ 1.71
TMEFF1-201ENST00000374879 NOL7Q9UMY1 257 aaKnown RBP25.72■■□□□ 1.71
TMEFF1-201ENST00000374879 WWC1Q8IX03 1113 aa25.71■■□□□ 1.71
TMEFF1-201ENST00000374879 MTERF4Q7Z6M4 381 aaKnown RBP25.71■■□□□ 1.71
TMEFF1-201ENST00000374879 KANK1Q14678 1352 aa25.71■■□□□ 1.71
TMEFF1-201ENST00000374879 TET3O43151 1660 aa25.71■■□□□ 1.71
TMEFF1-201ENST00000374879 DYNC1I1O14576 645 aa25.69■■□□□ 1.7
TMEFF1-201ENST00000374879 KIF3BO15066 747 aa25.69■■□□□ 1.7
TMEFF1-201ENST00000374879 SYNMO15061 1565 aa25.69■■□□□ 1.7
TMEFF1-201ENST00000374879 ATP7AQ04656 1500 aa25.69■■□□□ 1.7
TMEFF1-201ENST00000374879 FANCAO15360 1455 aa25.69■■□□□ 1.7
TMEFF1-201ENST00000374879 HS1BP3Q53T59 392 aa25.68■■□□□ 1.7
TMEFF1-201ENST00000374879 RBM25P49756 843 aaKnown RBP25.67■■□□□ 1.7
TMEFF1-201ENST00000374879 DDX49Q9Y6V7 483 aaKnown RBP25.67■■□□□ 1.7
TMEFF1-201ENST00000374879 INO80Q9ULG1 1556 aaPredicted RBP25.66■■□□□ 1.7
TMEFF1-201ENST00000374879 SSFA2P28290 1259 aa25.66■■□□□ 1.7
TMEFF1-201ENST00000374879 DMTNQ08495 405 aa25.66■■□□□ 1.7
TMEFF1-201ENST00000374879 KLHL40Q2TBA0 621 aa25.66■■□□□ 1.7
TMEFF1-201ENST00000374879 IBTKQ9P2D0 1353 aaPredicted RBP25.65■■□□□ 1.7
TMEFF1-201ENST00000374879 ASXL1Q8IXJ9 1541 aa25.64■■□□□ 1.7
TMEFF1-201ENST00000374879 VWDEQ8N2E2 1590 aa25.64■■□□□ 1.69
TMEFF1-201ENST00000374879 NGEFQ8N5V2 710 aa25.64■■□□□ 1.69
TMEFF1-201ENST00000374879 ABCA9Q8IUA7 1624 aa25.63■■□□□ 1.69
TMEFF1-201ENST00000374879 UTP14CQ5TAP6 766 aaKnown RBP25.63■■□□□ 1.69
TMEFF1-201ENST00000374879 CD2BP2O95400 341 aaKnown RBP25.63■■□□□ 1.69
TMEFF1-201ENST00000374879 NEUROD2Q15784 382 aa25.63■■□□□ 1.69
TMEFF1-201ENST00000374879 GOLGA6L22H0YM25 854 aa25.62■■□□□ 1.69
TMEFF1-201ENST00000374879 ZSCAN20P17040 1043 aaPredicted RBP25.61■■□□□ 1.69
TMEFF1-201ENST00000374879 PDLIM2Q96JY6 352 aa25.61■■□□□ 1.69
TMEFF1-201ENST00000374879 MYOM1P52179 1685 aa25.61■■□□□ 1.69
TMEFF1-201ENST00000374879 ADGRL1O94910 1474 aa25.61■■□□□ 1.69
TMEFF1-201ENST00000374879 CCDC94Q9BW85 323 aaPredicted RBP25.61■■□□□ 1.69
TMEFF1-201ENST00000374879 MVPQ14764 893 aaKnown RBP25.6■■□□□ 1.69
TMEFF1-201ENST00000374879 RBSNQ9H1K0 784 aa25.6■■□□□ 1.69
TMEFF1-201ENST00000374879 ZNF445P59923 1031 aa25.6■■□□□ 1.69
TMEFF1-201ENST00000374879 CFAP70Q5T0N1 1121 aa25.6■■□□□ 1.69
TMEFF1-201ENST00000374879 ZKSCAN5Q9Y2L8 839 aa25.6■■□□□ 1.69
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms