RNA–Protein interactions for RNA: ENST00000348990.9

APP-202, Transcript of amyloid beta precursor protein, humanhuman

TSL 1 (best) BASIC

Gene APP, Length 3,355 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-202ENST00000348990 LNPKQ9C0E8 428 aa22.41■■□□□ 1.18
APP-202ENST00000348990 FSD2A1L4K1 749 aa22.41■■□□□ 1.18
APP-202ENST00000348990 AAMPQ13685 434 aa22.41■■□□□ 1.18
APP-202ENST00000348990 ESPNB1AK53 854 aa22.41■■□□□ 1.18
APP-202ENST00000348990 WDR63Q8IWG1 891 aa22.4■■□□□ 1.18
APP-202ENST00000348990 SLC24A1O60721 1099 aa22.39■■□□□ 1.18
APP-202ENST00000348990 ADGRF5Q8IZF2 1346 aa22.39■■□□□ 1.18
APP-202ENST00000348990 EXOSC9Q06265 439 aaKnown RBP22.39■■□□□ 1.17
APP-202ENST00000348990 ABCA8O94911 1581 aa22.39■■□□□ 1.17
APP-202ENST00000348990 NPC1L1Q9UHC9 1359 aa22.38■■□□□ 1.17
APP-202ENST00000348990 SAFB2Q14151 953 aaKnown RBP eCLIP22.38■■□□□ 1.17
APP-202ENST00000348990 GBP4Q96PP9 640 aa22.37■■□□□ 1.17
APP-202ENST00000348990 ABCC2Q92887 1545 aa22.37■■□□□ 1.17
APP-202ENST00000348990 NCLP19338 710 aaKnown RBP22.36■■□□□ 1.17
APP-202ENST00000348990 ANP32BQ92688 251 aaKnown RBP22.36■■□□□ 1.17
APP-202ENST00000348990 NSD3Q9BZ95 1437 aa22.36■■□□□ 1.17
APP-202ENST00000348990 PKNOX2Q96KN3 472 aa22.36■■□□□ 1.17
APP-202ENST00000348990 NLRP1Q9C000 1473 aa22.36■■□□□ 1.17
APP-202ENST00000348990 TMEM132EQ6IEE7 984 aa22.35■■□□□ 1.17
APP-202ENST00000348990 TNPO1Q92973 898 aaKnown RBP22.35■■□□□ 1.17
APP-202ENST00000348990 DDX19BQ9UMR2 479 aa22.34■■□□□ 1.17
APP-202ENST00000348990 TRIM27P14373 513 aa22.34■■□□□ 1.17
APP-202ENST00000348990 CLASP1Q7Z460 1538 aa22.33■■□□□ 1.17
APP-202ENST00000348990 POLR3AO14802 1390 aaPredicted RBP22.33■■□□□ 1.17
APP-202ENST00000348990 NOB1Q9ULX3 412 aaKnown RBP22.33■■□□□ 1.17
APP-202ENST00000348990 MYO5CQ9NQX4 1742 aa22.33■■□□□ 1.17
APP-202ENST00000348990 SSH1Q8WYL5 1049 aa22.33■■□□□ 1.16
APP-202ENST00000348990 STAC3Q96MF2 364 aa22.33■■□□□ 1.16
APP-202ENST00000348990 NUTM2DQ5VT03 806 aaPredicted RBP22.32■■□□□ 1.16
APP-202ENST00000348990 LAMC1P11047 1609 aa22.32■■□□□ 1.16
APP-202ENST00000348990 SYNMO15061 1565 aa22.32■■□□□ 1.16
APP-202ENST00000348990 TMEM57Q8N5G2 664 aa22.3■■□□□ 1.16
APP-202ENST00000348990 KANK1Q14678 1352 aa22.3■■□□□ 1.16
APP-202ENST00000348990 ANKRD45Q5TZF3 282 aa22.3■■□□□ 1.16
APP-202ENST00000348990 GOLGA6L22H0YM25 854 aa22.3■■□□□ 1.16
APP-202ENST00000348990 ATF7IPQ6VMQ6 1270 aa22.29■■□□□ 1.16
APP-202ENST00000348990 ZMYND15Q9H091 742 aa22.29■■□□□ 1.16
APP-202ENST00000348990 SCAPERQ9BY12 1400 aa22.29■■□□□ 1.16
APP-202ENST00000348990 GAS2L3Q86XJ1 694 aa22.29■■□□□ 1.16
APP-202ENST00000348990 DUOX2Q9NRD8 1548 aa22.28■■□□□ 1.16
APP-202ENST00000348990 RRP9O43818 475 aaKnown RBP22.27■■□□□ 1.16
APP-202ENST00000348990 ERBB4Q15303 1308 aa22.27■■□□□ 1.16
APP-202ENST00000348990 DDX49Q9Y6V7 483 aaKnown RBP22.26■■□□□ 1.15
APP-202ENST00000348990 CDC42BPBQ9Y5S2 1711 aa22.26■■□□□ 1.15
APP-202ENST00000348990 C1orf115Q9H7X2 142 aa22.25■■□□□ 1.15
APP-202ENST00000348990 UNC13BO14795 1591 aa22.25■■□□□ 1.15
APP-202ENST00000348990 IPO8O15397 1037 aaKnown RBP22.24■■□□□ 1.15
APP-202ENST00000348990 MAST1Q9Y2H9 1570 aa22.24■■□□□ 1.15
APP-202ENST00000348990 RBM42Q9BTD8 480 aaKnown RBP22.24■■□□□ 1.15
APP-202ENST00000348990 ATP10AO60312 1499 aa22.24■■□□□ 1.15
APP-202ENST00000348990 ERVK-7P63135 1459 aa22.24■■□□□ 1.15
APP-202ENST00000348990 TRAPPC8Q9Y2L5 1435 aa22.23■■□□□ 1.15
APP-202ENST00000348990 IQGAP3Q86VI3 1631 aa22.23■■□□□ 1.15
APP-202ENST00000348990 RIPK4P57078 832 aa22.23■■□□□ 1.15
APP-202ENST00000348990 HDAC1Q13547 482 aaPredicted RBP22.23■■□□□ 1.15
APP-202ENST00000348990 ELL2O00472 640 aaPredicted RBP22.22■■□□□ 1.15
APP-202ENST00000348990 SKOR2Q2VWA4 1001 aaPredicted RBP22.22■■□□□ 1.15
APP-202ENST00000348990 GGNBP2Q9H3C7 697 aa22.22■■□□□ 1.15
APP-202ENST00000348990 MSNP26038 577 aaKnown RBP22.22■■□□□ 1.15
APP-202ENST00000348990 NASPP49321 788 aaPredicted RBP22.22■■□□□ 1.15
APP-202ENST00000348990 PREX2Q70Z35 1606 aa22.21■■□□□ 1.15
APP-202ENST00000348990 SSFA2P28290 1259 aa22.21■■□□□ 1.15
APP-202ENST00000348990 CHD1LQ86WJ1 897 aa22.21■■□□□ 1.15
APP-202ENST00000348990 CABP2Q9NPB3 220 aa22.21■■□□□ 1.15
APP-202ENST00000348990 MADDQ8WXG6 1647 aa22.2■■□□□ 1.15
APP-202ENST00000348990 TMPOP42166 694 aaKnown RBP22.2■■□□□ 1.14
APP-202ENST00000348990 SMC5Q8IY18 1101 aa22.2■■□□□ 1.14
APP-202ENST00000348990 CCDC27Q2M243 656 aa22.19■■□□□ 1.14
APP-202ENST00000348990 ARID3AQ99856 593 aa22.19■■□□□ 1.14
APP-202ENST00000348990 KIAA1211Q6ZU35 1233 aa22.19■■□□□ 1.14
APP-202ENST00000348990 ZNF692Q9BU19 519 aaPredicted RBP22.19■■□□□ 1.14
APP-202ENST00000348990 STK26Q9P289 416 aa22.19■■□□□ 1.14
APP-202ENST00000348990 TTC37Q6PGP7 1564 aa22.19■■□□□ 1.14
APP-202ENST00000348990 ISY1Q9ULR0 285 aaKnown RBP22.19■■□□□ 1.14
APP-202ENST00000348990 KDM5AP29375 1690 aaKnown RBP22.18■■□□□ 1.14
APP-202ENST00000348990 SRPK2P78362 688 aaKnown RBP22.18■■□□□ 1.14
APP-202ENST00000348990 PHF23Q9BUL5 403 aaPredicted RBP22.18■■□□□ 1.14
APP-202ENST00000348990 CD2BP2O95400 341 aaKnown RBP22.17■■□□□ 1.14
APP-202ENST00000348990 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP22.17■■□□□ 1.14
APP-202ENST00000348990 RNF17Q9BXT8 1623 aaKnown RBP22.17■■□□□ 1.14
APP-202ENST00000348990 K7ELQ4 463 aaPredicted RBP22.16■■□□□ 1.14
APP-202ENST00000348990 RBM10P98175 930 aaKnown RBP22.16■■□□□ 1.14
APP-202ENST00000348990 CIZ1Q9ULV3 898 aaPredicted RBP22.16■■□□□ 1.14
APP-202ENST00000348990 NUCB1Q02818 461 aa22.16■■□□□ 1.14
APP-202ENST00000348990 ZMYM3Q14202 1370 aa22.16■■□□□ 1.14
APP-202ENST00000348990 RAB3GAP1Q15042 981 aa22.16■■□□□ 1.14
APP-202ENST00000348990 MCTP1Q6DN14 999 aa22.16■■□□□ 1.14
APP-202ENST00000348990 ZBTB40Q9NUA8 1239 aa22.16■■□□□ 1.14
APP-202ENST00000348990 VIRMAQ69YN4 1812 aaKnown RBP22.15■■□□□ 1.14
APP-202ENST00000348990 RBM25P49756 843 aaKnown RBP22.15■■□□□ 1.14
APP-202ENST00000348990 GGT6Q6P531 493 aa22.15■■□□□ 1.14
APP-202ENST00000348990 SNX21Q969T3 373 aa22.15■■□□□ 1.14
APP-202ENST00000348990 IQGAP1P46940 1657 aa22.15■■□□□ 1.14
APP-202ENST00000348990 APBB1O00213 710 aa22.14■■□□□ 1.14
APP-202ENST00000348990 ZBTB7CA1YPR0 619 aa22.14■■□□□ 1.13
APP-202ENST00000348990 CALD1Q05682 793 aaKnown RBP22.13■■□□□ 1.13
APP-202ENST00000348990 KIF16BQ96L93 1317 aa22.13■■□□□ 1.13
APP-202ENST00000348990 CAVIN1Q6NZI2 390 aaKnown RBP22.13■■□□□ 1.13
APP-202ENST00000348990 PTPRTO14522 1441 aa22.13■■□□□ 1.13
APP-202ENST00000348990 CT47B1P0C2W7 299 aaPredicted RBP22.13■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms