RNA–Protein interactions for RNA: ENSMUST00000225246.1

Ssr1-203, Transcript of Translocon-associated protein subunit alpha, mousemouse

BASIC

Gene Ssr1, Length 1,825 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ssr1-203ENSMUST00000225246 Fam135bQ9DAI6 1403 aa16.93■□□□□ 0.3
Ssr1-203ENSMUST00000225246 Znf518aB2RRF6 1478 aaKnown RBP16.93■□□□□ 0.3
Ssr1-203ENSMUST00000225246 Iqsec2Q5DU25 1478 aa16.93■□□□□ 0.3
Ssr1-203ENSMUST00000225246 Uggt1Q6P5E4 1551 aa16.93■□□□□ 0.3
Ssr1-203ENSMUST00000225246 Sipa1l1Q8C0T5 1782 aa16.92■□□□□ 0.3
Ssr1-203ENSMUST00000225246 Hfm1D3Z4R1 1434 aa16.92■□□□□ 0.3
Ssr1-203ENSMUST00000225246 Trim58Q5NCC9 485 aa16.92■□□□□ 0.3
Ssr1-203ENSMUST00000225246 Ak7Q9D2H2 614 aa16.92■□□□□ 0.3
Ssr1-203ENSMUST00000225246 AatkQ80YE4 1365 aa16.91■□□□□ 0.3
Ssr1-203ENSMUST00000225246 4933416C03RikQ3V063 378 aa16.91■□□□□ 0.3
Ssr1-203ENSMUST00000225246 Tspyl2Q7TQI8 677 aa16.91■□□□□ 0.3
Ssr1-203ENSMUST00000225246 Ccdc183A2AJB1 534 aa16.91■□□□□ 0.3
Ssr1-203ENSMUST00000225246 Apbb1Q9QXJ1 710 aa16.91■□□□□ 0.3
Ssr1-203ENSMUST00000225246 Adgrb3Q80ZF8 1522 aa16.9■□□□□ 0.3
Ssr1-203ENSMUST00000225246 Erich6D3Z6S9 713 aa16.9■□□□□ 0.3
Ssr1-203ENSMUST00000225246 Neurod2Q62414 383 aa16.9■□□□□ 0.3
Ssr1-203ENSMUST00000225246 Abca6Q8K441 1624 aa16.9■□□□□ 0.3
Ssr1-203ENSMUST00000225246 Srpk2O54781 681 aaKnown RBP16.89■□□□□ 0.29
Ssr1-203ENSMUST00000225246 Efcab6Q6P1E8 1516 aa16.88■□□□□ 0.29
Ssr1-203ENSMUST00000225246 Topbp1Q6ZQF0 1515 aa16.88■□□□□ 0.29
Ssr1-203ENSMUST00000225246 Adgrl1Q80TR1 1466 aa16.88■□□□□ 0.29
Ssr1-203ENSMUST00000225246 IbtkQ6ZPR6 1352 aaKnown RBP16.88■□□□□ 0.29
Ssr1-203ENSMUST00000225246 Ehbp1l1Q99MS7 1716 aa16.87■□□□□ 0.29
Ssr1-203ENSMUST00000225246 Depdc5P61460 1591 aa16.86■□□□□ 0.29
Ssr1-203ENSMUST00000225246 Tecpr2Q3UH45 1423 aa16.86■□□□□ 0.29
Ssr1-203ENSMUST00000225246 Eif2s2Q99L45 331 aaKnown RBP16.86■□□□□ 0.29
Ssr1-203ENSMUST00000225246 Scaf11E9PZM7 1456 aaKnown RBP16.86■□□□□ 0.29
Ssr1-203ENSMUST00000225246 Kif3bQ61771 747 aa16.86■□□□□ 0.29
Ssr1-203ENSMUST00000225246 Abca9Q8K449 1623 aa16.86■□□□□ 0.29
Ssr1-203ENSMUST00000225246 MaddQ80U28 1577 aa16.85■□□□□ 0.29
Ssr1-203ENSMUST00000225246 Trim30dE9PWL0 497 aa16.85■□□□□ 0.29
Ssr1-203ENSMUST00000225246 Hsp90ab1P11499 724 aaKnown RBP16.85■□□□□ 0.29
Ssr1-203ENSMUST00000225246 Gas2l2Q5SSG4 860 aa16.85■□□□□ 0.29
Ssr1-203ENSMUST00000225246 Os9Q8K2C7 672 aa16.85■□□□□ 0.29
Ssr1-203ENSMUST00000225246 Eif2ak4Q9QZ05 1648 aa16.85■□□□□ 0.29
Ssr1-203ENSMUST00000225246 Duxf3A0A0N4SV92 674 aa16.84■□□□□ 0.29
Ssr1-203ENSMUST00000225246 Fan1Q69ZT1 1020 aa16.84■□□□□ 0.29
Ssr1-203ENSMUST00000225246 Pank1Q8K4K6 548 aa16.84■□□□□ 0.29
Ssr1-203ENSMUST00000225246 Rlbp1Q9Z275 317 aa16.84■□□□□ 0.29
Ssr1-203ENSMUST00000225246 InsrP15208 1372 aa16.84■□□□□ 0.29
Ssr1-203ENSMUST00000225246 Cfap65Q3V0B4 1847 aa16.83■□□□□ 0.29
Ssr1-203ENSMUST00000225246 Znf608Q56A10 1511 aa16.83■□□□□ 0.29
Ssr1-203ENSMUST00000225246 Ino80Q6ZPV2 1559 aa16.83■□□□□ 0.28
Ssr1-203ENSMUST00000225246 Htatsf1Q8BGC0 757 aa16.82■□□□□ 0.28
Ssr1-203ENSMUST00000225246 Prex1Q69ZK0 1650 aa16.82■□□□□ 0.28
Ssr1-203ENSMUST00000225246 Med14A2ABV5 1459 aaKnown RBP16.82■□□□□ 0.28
Ssr1-203ENSMUST00000225246 Skint5A7XUY5 1461 aa16.82■□□□□ 0.28
Ssr1-203ENSMUST00000225246 GsdmaQ9EST1 446 aa16.82■□□□□ 0.28
Ssr1-203ENSMUST00000225246 Akap12Q9WTQ5 1684 aa16.82■□□□□ 0.28
Ssr1-203ENSMUST00000225246 Ppp2r3aB2RXC8 1150 aa16.81■□□□□ 0.28
Ssr1-203ENSMUST00000225246 Puf60Q3UEB3 564 aaKnown RBP16.81■□□□□ 0.28
Ssr1-203ENSMUST00000225246 Atl3Q91YH5 541 aa16.81■□□□□ 0.28
Ssr1-203ENSMUST00000225246 Hecw2Q6I6G8 1578 aa16.8■□□□□ 0.28
Ssr1-203ENSMUST00000225246 Cald1E9QA15 768 aaKnown RBP16.8■□□□□ 0.28
Ssr1-203ENSMUST00000225246 P2rx7Q9Z1M0 595 aa16.8■□□□□ 0.28
Ssr1-203ENSMUST00000225246 Ift172Q6VH22 1749 aa16.8■□□□□ 0.28
Ssr1-203ENSMUST00000225246 Stk24Q99KH8 431 aa16.8■□□□□ 0.28
Ssr1-203ENSMUST00000225246 Plxnc1Q9QZC2 1574 aa16.79■□□□□ 0.28
Ssr1-203ENSMUST00000225246 Plcd4Q8K3R3 807 aa16.79■□□□□ 0.28
Ssr1-203ENSMUST00000225246 PalldQ9ET54 1408 aa16.78■□□□□ 0.28
Ssr1-203ENSMUST00000225246 Hs1bp3Q3TC93 395 aa16.78■□□□□ 0.28
Ssr1-203ENSMUST00000225246 Ipo4Q8VI75 1082 aa16.78■□□□□ 0.28
Ssr1-203ENSMUST00000225246 Ttc37F8VPK0 1563 aa16.77■□□□□ 0.28
Ssr1-203ENSMUST00000225246 Sptbn5F6UCX4 1208 aa16.77■□□□□ 0.28
Ssr1-203ENSMUST00000225246 Ppp1r18Q8BQ30 594 aa16.77■□□□□ 0.28
Ssr1-203ENSMUST00000225246 Tbc1d32Q3URV1 1296 aa16.77■□□□□ 0.27
Ssr1-203ENSMUST00000225246 Lemd3Q9WU40 921 aa16.77■□□□□ 0.27
Ssr1-203ENSMUST00000225246 Prdm2A2A7B5 1709 aaKnown RBP16.76■□□□□ 0.27
Ssr1-203ENSMUST00000225246 4930567H17RikQ3V0K5 233 aa16.75■□□□□ 0.27
Ssr1-203ENSMUST00000225246 Cdc42bpgQ80UW5 1551 aa16.75■□□□□ 0.27
Ssr1-203ENSMUST00000225246 Znf541Q0GGX2 1363 aa16.74■□□□□ 0.27
Ssr1-203ENSMUST00000225246 Rabep1O35551 862 aa16.74■□□□□ 0.27
Ssr1-203ENSMUST00000225246 Fgd1P52734 960 aa16.74■□□□□ 0.27
Ssr1-203ENSMUST00000225246 Atxn3Q9CVD2 355 aa16.74■□□□□ 0.27
Ssr1-203ENSMUST00000225246 Nrxn1Q9CS84 1514 aa16.73■□□□□ 0.27
Ssr1-203ENSMUST00000225246 Ccar1Q8CH18 1146 aaKnown RBP16.73■□□□□ 0.27
Ssr1-203ENSMUST00000225246 4933402E13RikQ9D4D2 429 aa16.73■□□□□ 0.27
Ssr1-203ENSMUST00000225246 Phlpp2Q8BXA7 1320 aa16.73■□□□□ 0.27
Ssr1-203ENSMUST00000225246 Slc52a2Q9D8F3 450 aa16.72■□□□□ 0.27
Ssr1-203ENSMUST00000225246 Lrrc7Q80TE7 1490 aa16.72■□□□□ 0.27
Ssr1-203ENSMUST00000225246 Kiaa0556Q8C753 1610 aa16.71■□□□□ 0.27
Ssr1-203ENSMUST00000225246 AU022751B1B0V2 589 aa16.7■□□□□ 0.26
Ssr1-203ENSMUST00000225246 Ciz1Q8VEH2 845 aa16.7■□□□□ 0.26
Ssr1-203ENSMUST00000225246 KarsQ99MN1 595 aaKnown RBP16.7■□□□□ 0.26
Ssr1-203ENSMUST00000225246 Atp10aO54827 1508 aa16.69■□□□□ 0.26
Ssr1-203ENSMUST00000225246 Antxr1Q9CZ52 562 aa16.69■□□□□ 0.26
Ssr1-203ENSMUST00000225246 CenpjQ569L8 1344 aa16.69■□□□□ 0.26
Ssr1-203ENSMUST00000225246 Stag3O70576 1240 aa16.68■□□□□ 0.26
Ssr1-203ENSMUST00000225246 Cnga1P29974 684 aa16.68■□□□□ 0.26
Ssr1-203ENSMUST00000225246 Ksr2Q3UVC0 959 aa16.68■□□□□ 0.26
Ssr1-203ENSMUST00000225246 Mroh1E0CZ22 1640 aa16.67■□□□□ 0.26
Ssr1-203ENSMUST00000225246 Uhrf1bp1B2KF50 1429 aa16.67■□□□□ 0.26
Ssr1-203ENSMUST00000225246 Tnpo1Q8BFY9 898 aaKnown RBP16.67■□□□□ 0.26
Ssr1-203ENSMUST00000225246 Gm6268A2A3U9 297 aa16.66■□□□□ 0.26
Ssr1-203ENSMUST00000225246 OvosQ3UU35 1456 aa16.66■□□□□ 0.26
Ssr1-203ENSMUST00000225246 IqubQ8CDK3 788 aa16.66■□□□□ 0.26
Ssr1-203ENSMUST00000225246 Tsen2Q6P7W5 460 aa16.65■□□□□ 0.26
Ssr1-203ENSMUST00000225246 Gli2Q0VGT2 1544 aa16.65■□□□□ 0.26
Ssr1-203ENSMUST00000225246 Apaf1O88879 1249 aa16.64■□□□□ 0.25
Ssr1-203ENSMUST00000225246 AglF8VPN4 1532 aa16.64■□□□□ 0.25
Retrieved 100 of 22,080 RNA–protein pairs in 123.4 ms