RNA–Protein interactions for RNA: ENSMUST00000171158.7

Sdc1-205, Transcript of Syndecan-1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Sdc1, Length 2,311 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc1-205ENSMUST00000171158 Ccdc30Q8BVF4 654 aa20.49■□□□□ 0.87
Sdc1-205ENSMUST00000171158 Cul9Q80TT8 1865 aa20.49■□□□□ 0.87
Sdc1-205ENSMUST00000171158 Kiaa0556Q8C753 1610 aa20.48■□□□□ 0.87
Sdc1-205ENSMUST00000171158 Kdm2bQ6P1G2 1309 aa20.48■□□□□ 0.87
Sdc1-205ENSMUST00000171158 InsrP15208 1372 aa20.47■□□□□ 0.87
Sdc1-205ENSMUST00000171158 Cnga1P29974 684 aa20.46■□□□□ 0.87
Sdc1-205ENSMUST00000171158 Golga2Q921M4 999 aa20.46■□□□□ 0.87
Sdc1-205ENSMUST00000171158 Eif2ak4Q9QZ05 1648 aa20.46■□□□□ 0.87
Sdc1-205ENSMUST00000171158 Knl1Q66JQ7 1612 aa20.46■□□□□ 0.87
Sdc1-205ENSMUST00000171158 Adamts7Q68SA9 1657 aa20.45■□□□□ 0.86
Sdc1-205ENSMUST00000171158 Ttll13A4Q9F6 804 aa20.45■□□□□ 0.86
Sdc1-205ENSMUST00000171158 Adgrl3Q80TS3 1537 aa20.44■□□□□ 0.86
Sdc1-205ENSMUST00000171158 Stag3O70576 1240 aa20.44■□□□□ 0.86
Sdc1-205ENSMUST00000171158 Uspl1Q3ULM6 1089 aa20.44■□□□□ 0.86
Sdc1-205ENSMUST00000171158 Neurod2Q62414 383 aa20.43■□□□□ 0.86
Sdc1-205ENSMUST00000171158 Zmym3Q9JLM4 1370 aa20.43■□□□□ 0.86
Sdc1-205ENSMUST00000171158 Scaf11E9PZM7 1456 aaKnown RBP20.43■□□□□ 0.86
Sdc1-205ENSMUST00000171158 Slc52a2Q9D8F3 450 aa20.42■□□□□ 0.86
Sdc1-205ENSMUST00000171158 Ttc37F8VPK0 1563 aa20.41■□□□□ 0.86
Sdc1-205ENSMUST00000171158 IbtkQ6ZPR6 1352 aaKnown RBP20.41■□□□□ 0.86
Sdc1-205ENSMUST00000171158 Ralbp1Q62172 648 aa20.41■□□□□ 0.86
Sdc1-205ENSMUST00000171158 Pabpn1Q8CCS6 302 aaKnown RBP20.41■□□□□ 0.86
Sdc1-205ENSMUST00000171158 Prdm10Q3UTQ7 1184 aa20.41■□□□□ 0.86
Sdc1-205ENSMUST00000171158 Map4k4P97820 1233 aaKnown RBP20.39■□□□□ 0.86
Sdc1-205ENSMUST00000171158 Iqsec2Q5DU25 1478 aa20.39■□□□□ 0.86
Sdc1-205ENSMUST00000171158 Hfm1D3Z4R1 1434 aa20.39■□□□□ 0.85
Sdc1-205ENSMUST00000171158 IqubQ8CDK3 788 aa20.38■□□□□ 0.85
Sdc1-205ENSMUST00000171158 Apbb1Q9QXJ1 710 aa20.38■□□□□ 0.85
Sdc1-205ENSMUST00000171158 P2rx7Q9Z1M0 595 aa20.37■□□□□ 0.85
Sdc1-205ENSMUST00000171158 Adgrl1Q80TR1 1466 aa20.36■□□□□ 0.85
Sdc1-205ENSMUST00000171158 CenpjQ569L8 1344 aa20.36■□□□□ 0.85
Sdc1-205ENSMUST00000171158 Yeats2Q3TUF7 1407 aa20.35■□□□□ 0.85
Sdc1-205ENSMUST00000171158 Gm156Q58A37 223 aa20.35■□□□□ 0.85
Sdc1-205ENSMUST00000171158 B4galnt3Q6L8S8 986 aa20.35■□□□□ 0.85
Sdc1-205ENSMUST00000171158 Cald1E9QA15 768 aaKnown RBP20.34■□□□□ 0.85
Sdc1-205ENSMUST00000171158 GsdmaQ9EST1 446 aa20.34■□□□□ 0.85
Sdc1-205ENSMUST00000171158 Nrxn1Q9CS84 1514 aa20.34■□□□□ 0.85
Sdc1-205ENSMUST00000171158 Cfap65Q3V0B4 1847 aa20.34■□□□□ 0.85
Sdc1-205ENSMUST00000171158 Ccdc27Q3V036 639 aa20.33■□□□□ 0.84
Sdc1-205ENSMUST00000171158 Gas2l2Q5SSG4 860 aa20.33■□□□□ 0.84
Sdc1-205ENSMUST00000171158 EspnQ9ET47 871 aa20.32■□□□□ 0.84
Sdc1-205ENSMUST00000171158 Ahdc1Q6PAL7 1594 aaKnown RBP20.31■□□□□ 0.84
Sdc1-205ENSMUST00000171158 Smc5Q8CG46 1101 aaKnown RBP20.31■□□□□ 0.84
Sdc1-205ENSMUST00000171158 Qser1A2BIE1 1698 aa20.31■□□□□ 0.84
Sdc1-205ENSMUST00000171158 Med14A2ABV5 1459 aaKnown RBP20.31■□□□□ 0.84
Sdc1-205ENSMUST00000171158 Arhgap23Q69ZH9 1483 aa20.31■□□□□ 0.84
Sdc1-205ENSMUST00000171158 Prrc2bQ7TPM1 1486 aaKnown RBP20.3■□□□□ 0.84
Sdc1-205ENSMUST00000171158 Hecw2Q6I6G8 1578 aa20.29■□□□□ 0.84
Sdc1-205ENSMUST00000171158 Chmp5Q9D7S9 219 aa20.28■□□□□ 0.84
Sdc1-205ENSMUST00000171158 PtprmP28828 1452 aa20.26■□□□□ 0.83
Sdc1-205ENSMUST00000171158 ChgaP26339 463 aaKnown RBP20.26■□□□□ 0.83
Sdc1-205ENSMUST00000171158 Znf521Q6KAS7 1311 aa20.26■□□□□ 0.83
Sdc1-205ENSMUST00000171158 Mapk8ip3Q9ESN9 1337 aa20.26■□□□□ 0.83
Sdc1-205ENSMUST00000171158 Tspyl2Q7TQI8 677 aa20.26■□□□□ 0.83
Sdc1-205ENSMUST00000171158 Dbr1Q923B1 550 aa20.26■□□□□ 0.83
Sdc1-205ENSMUST00000171158 Atxn3Q9CVD2 355 aa20.26■□□□□ 0.83
Sdc1-205ENSMUST00000171158 CltcQ68FD5 1675 aaKnown RBP20.25■□□□□ 0.83
Sdc1-205ENSMUST00000171158 Cep170bQ80U49 1574 aa20.24■□□□□ 0.83
Sdc1-205ENSMUST00000171158 Stk26Q99JT2 416 aa20.24■□□□□ 0.83
Sdc1-205ENSMUST00000171158 Exosc9Q9JHI7 438 aaKnown RBP20.24■□□□□ 0.83
Sdc1-205ENSMUST00000171158 Arhgef28P97433 1693 aa20.22■□□□□ 0.83
Sdc1-205ENSMUST00000171158 Pank1Q8K4K6 548 aa20.22■□□□□ 0.83
Sdc1-205ENSMUST00000171158 Nkx1-2P42580 305 aa20.21■□□□□ 0.83
Sdc1-205ENSMUST00000171158 Bcl11aQ9QYE3 773 aa20.21■□□□□ 0.83
Sdc1-205ENSMUST00000171158 Fam135bQ9DAI6 1403 aa20.21■□□□□ 0.83
Sdc1-205ENSMUST00000171158 Trim58Q5NCC9 485 aa20.21■□□□□ 0.83
Sdc1-205ENSMUST00000171158 Shq1Q7TMX5 569 aa20.21■□□□□ 0.83
Sdc1-205ENSMUST00000171158 Synj2Q9D2G5 1434 aa20.21■□□□□ 0.83
Sdc1-205ENSMUST00000171158 Ncbp3Q8BZR9 615 aaKnown RBP20.2■□□□□ 0.82
Sdc1-205ENSMUST00000171158 Kif13aQ9EQW7 1749 aa20.2■□□□□ 0.82
Sdc1-205ENSMUST00000171158 Iqcf3Q9D498 203 aa20.2■□□□□ 0.82
Sdc1-205ENSMUST00000171158 Tsen2Q6P7W5 460 aa20.19■□□□□ 0.82
Sdc1-205ENSMUST00000171158 Zranb1Q7M760 708 aa20.19■□□□□ 0.82
Sdc1-205ENSMUST00000171158 U2af1Q9D883 239 aaKnown RBP20.19■□□□□ 0.82
Sdc1-205ENSMUST00000171158 NudcO35685 332 aaKnown RBP20.19■□□□□ 0.82
Sdc1-205ENSMUST00000171158 Apaf1O88879 1249 aa20.19■□□□□ 0.82
Sdc1-205ENSMUST00000171158 Atp1b4Q99ME6 356 aa20.18■□□□□ 0.82
Sdc1-205ENSMUST00000171158 Abca14E9Q8F8 1683 aa20.17■□□□□ 0.82
Sdc1-205ENSMUST00000171158 Itsn1Q9Z0R4 1714 aa20.17■□□□□ 0.82
Sdc1-205ENSMUST00000171158 AampJ3QN89 436 aa20.14■□□□□ 0.82
Sdc1-205ENSMUST00000171158 NktrP30415 1453 aa20.13■□□□□ 0.81
Sdc1-205ENSMUST00000171158 Duxf3A0A0N4SV92 674 aa20.13■□□□□ 0.81
Sdc1-205ENSMUST00000171158 CanxP35564 591 aaKnown RBP20.13■□□□□ 0.81
Sdc1-205ENSMUST00000171158 Naip7Q9JIB3 1402 aa20.13■□□□□ 0.81
Sdc1-205ENSMUST00000171158 Gsto1O09131 240 aa20.13■□□□□ 0.81
Sdc1-205ENSMUST00000171158 Ksr2Q3UVC0 959 aa20.12■□□□□ 0.81
Sdc1-205ENSMUST00000171158 PplQ9R269 1755 aa20.12■□□□□ 0.81
Sdc1-205ENSMUST00000171158 Rlbp1Q9Z275 317 aa20.11■□□□□ 0.81
Sdc1-205ENSMUST00000171158 Plekhg1F6S200 1446 aa20.11■□□□□ 0.81
Sdc1-205ENSMUST00000171158 NinlQ6ZQ12 1394 aa20.11■□□□□ 0.81
Sdc1-205ENSMUST00000171158 Q9D9H8 365 aa20.1■□□□□ 0.81
Sdc1-205ENSMUST00000171158 Ccar1Q8CH18 1146 aaKnown RBP20.1■□□□□ 0.81
Sdc1-205ENSMUST00000171158 Dusp27Q148W8 1138 aa20.09■□□□□ 0.81
Sdc1-205ENSMUST00000171158 Polr3glQ8R0C0 218 aa20.09■□□□□ 0.81
Sdc1-205ENSMUST00000171158 Znf541Q0GGX2 1363 aa20.09■□□□□ 0.81
Sdc1-205ENSMUST00000171158 Atp2b2Q9R0K7 1198 aa20.09■□□□□ 0.81
Sdc1-205ENSMUST00000171158 Usp32F8VPZ3 1604 aa20.09■□□□□ 0.81
Sdc1-205ENSMUST00000171158 Utp14aQ640M1 767 aaKnown RBP20.08■□□□□ 0.81
Sdc1-205ENSMUST00000171158 Cdk19Q8BWD8 501 aa20.08■□□□□ 0.81
Sdc1-205ENSMUST00000171158 Afap1Q80YS6 731 aa20.07■□□□□ 0.8
Retrieved 100 of 22,080 RNA–protein pairs in 51.4 ms