RNA–Protein interactions for RNA: ENSMUST00000170033.1

Lig4-202, Transcript of DNA ligase 4, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Lig4, Length 3,105 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Lig4-202ENSMUST00000170033 Rrp7aQ9D1C9 280 aaKnown RBP8.28□□□□□ -1.08
Lig4-202ENSMUST00000170033 Pde4cQ3UEI1 686 aa8.27□□□□□ -1.08
Lig4-202ENSMUST00000170033 Nphp4P59240 1425 aa8.27□□□□□ -1.09
Lig4-202ENSMUST00000170033 Safb2Q80YR5 991 aaKnown RBP8.27□□□□□ -1.09
Lig4-202ENSMUST00000170033 Ofd1Q80Z25 1017 aa8.27□□□□□ -1.09
Lig4-202ENSMUST00000170033 Mak16Q8BGS0 296 aaKnown RBP8.27□□□□□ -1.09
Lig4-202ENSMUST00000170033 Prex1Q69ZK0 1650 aa8.26□□□□□ -1.09
Lig4-202ENSMUST00000170033 Cnksr2Q80YA9 1032 aa8.26□□□□□ -1.09
Lig4-202ENSMUST00000170033 Talpid3E9PV87 1520 aa8.26□□□□□ -1.09
Lig4-202ENSMUST00000170033 Dnttip2Q8R2M2 758 aaKnown RBP8.26□□□□□ -1.09
Lig4-202ENSMUST00000170033 Gprasp1Q5U4C1 1347 aa8.26□□□□□ -1.09
Lig4-202ENSMUST00000170033 Abca6Q8K441 1624 aa8.26□□□□□ -1.09
Lig4-202ENSMUST00000170033 Tmf1B9EKI3 1091 aa8.25□□□□□ -1.09
Lig4-202ENSMUST00000170033 MaddQ80U28 1577 aa8.25□□□□□ -1.09
Lig4-202ENSMUST00000170033 Fam43bA2AM80 330 aa8.25□□□□□ -1.09
Lig4-202ENSMUST00000170033 Liat1Q810M6 228 aa8.25□□□□□ -1.09
Lig4-202ENSMUST00000170033 Phf23Q8BSN5 401 aa8.25□□□□□ -1.09
Lig4-202ENSMUST00000170033 PrxO55103 1391 aa8.25□□□□□ -1.09
Lig4-202ENSMUST00000170033 Mroh1E0CZ22 1640 aa8.25□□□□□ -1.09
Lig4-202ENSMUST00000170033 1700019A02RikA0A087WPV9 146 aa8.25□□□□□ -1.09
Lig4-202ENSMUST00000170033 Zbtb38Q3LR78 1197 aa8.25□□□□□ -1.09
Lig4-202ENSMUST00000170033 Tcerg1Q8CGF7 1100 aaKnown RBP8.25□□□□□ -1.09
Lig4-202ENSMUST00000170033 Styxl1Q9DAR2 321 aa8.25□□□□□ -1.09
Lig4-202ENSMUST00000170033 Hfm1D3Z4R1 1434 aa8.24□□□□□ -1.09
Lig4-202ENSMUST00000170033 Hsp90aa1P07901 733 aaKnown RBP8.24□□□□□ -1.09
Lig4-202ENSMUST00000170033 Sox12Q04890 314 aa8.24□□□□□ -1.09
Lig4-202ENSMUST00000170033 Myom1Q62234 1667 aaKnown RBP8.24□□□□□ -1.09
Lig4-202ENSMUST00000170033 Prkrip1Q9CWV6 186 aaKnown RBP8.23□□□□□ -1.09
Lig4-202ENSMUST00000170033 Rab3gap2Q8BMG7 1366 aa8.23□□□□□ -1.09
Lig4-202ENSMUST00000170033 Col17a1Q07563 1470 aa8.23□□□□□ -1.09
Lig4-202ENSMUST00000170033 Ppp4r2Q0VGB7 417 aa8.23□□□□□ -1.09
Lig4-202ENSMUST00000170033 Rad21Q61550 635 aaKnown RBP8.23□□□□□ -1.09
Lig4-202ENSMUST00000170033 Cul9Q80TT8 1865 aa8.23□□□□□ -1.09
Lig4-202ENSMUST00000170033 Skint5A7XUY5 1461 aa8.21□□□□□ -1.09
Lig4-202ENSMUST00000170033 ErbinQ80TH2 1402 aa8.21□□□□□ -1.09
Lig4-202ENSMUST00000170033 Zscan10Q3URR7 782 aa8.21□□□□□ -1.09
Lig4-202ENSMUST00000170033 OvosQ3UU35 1456 aa8.21□□□□□ -1.1
Lig4-202ENSMUST00000170033 HomezQ80W88 542 aa8.21□□□□□ -1.1
Lig4-202ENSMUST00000170033 Mroh3A0A1D5RM54 893 aa8.2□□□□□ -1.1
Lig4-202ENSMUST00000170033 Grwd1Q810D6 446 aaKnown RBP8.2□□□□□ -1.1
Lig4-202ENSMUST00000170033 AdgbG3UZ78 1657 aa8.2□□□□□ -1.1
Lig4-202ENSMUST00000170033 CltcQ68FD5 1675 aaKnown RBP8.2□□□□□ -1.1
Lig4-202ENSMUST00000170033 Ttc37F8VPK0 1563 aa8.2□□□□□ -1.1
Lig4-202ENSMUST00000170033 Srcin1Q9QWI6 1250 aa8.2□□□□□ -1.1
Lig4-202ENSMUST00000170033 Ythdc2B2RR83 1445 aaKnown RBP8.2□□□□□ -1.1
Lig4-202ENSMUST00000170033 Ccdc9Q8VC31 543 aaKnown RBP8.19□□□□□ -1.1
Lig4-202ENSMUST00000170033 Ttc21bQ0HA38 1315 aa8.19□□□□□ -1.1
Lig4-202ENSMUST00000170033 L3mbtl2P59178 703 aa8.19□□□□□ -1.1
Lig4-202ENSMUST00000170033 Pdcl3Q8BVF2 240 aa8.19□□□□□ -1.1
Lig4-202ENSMUST00000170033 Ak9G3UYQ4 1894 aa8.19□□□□□ -1.1
Lig4-202ENSMUST00000170033 Med14A2ABV5 1459 aaKnown RBP8.19□□□□□ -1.1
Lig4-202ENSMUST00000170033 Ifit1bl1D3Z6F0 470 aa8.18□□□□□ -1.1
Lig4-202ENSMUST00000170033 4933416C03RikQ3V063 378 aa8.18□□□□□ -1.1
Lig4-202ENSMUST00000170033 Znf541Q0GGX2 1363 aa8.18□□□□□ -1.1
Lig4-202ENSMUST00000170033 Plekhh1Q80TI1 1356 aa8.18□□□□□ -1.1
Lig4-202ENSMUST00000170033 Myo3aQ8K3H5 1613 aa8.18□□□□□ -1.1
Lig4-202ENSMUST00000170033 Fam184bQ0KK56 942 aa8.18□□□□□ -1.1
Lig4-202ENSMUST00000170033 Rpgrip1lQ8CG73 1264 aa8.18□□□□□ -1.1
Lig4-202ENSMUST00000170033 Gli2Q0VGT2 1544 aa8.18□□□□□ -1.1
Lig4-202ENSMUST00000170033 Pank3Q8R2W9 370 aa8.18□□□□□ -1.1
Lig4-202ENSMUST00000170033 Adgrl1Q80TR1 1466 aa8.18□□□□□ -1.1
Lig4-202ENSMUST00000170033 Lemd3Q9WU40 921 aa8.17□□□□□ -1.1
Lig4-202ENSMUST00000170033 InsrP15208 1372 aa8.17□□□□□ -1.1
Lig4-202ENSMUST00000170033 RereQ80TZ9 1558 aa8.17□□□□□ -1.1
Lig4-202ENSMUST00000170033 Ythdc1E9Q5K9 736 aaKnown RBP8.17□□□□□ -1.1
Lig4-202ENSMUST00000170033 NeflP08551 543 aa8.17□□□□□ -1.1
Lig4-202ENSMUST00000170033 Rbm25B2RY56 838 aaKnown RBP8.16□□□□□ -1.1
Lig4-202ENSMUST00000170033 Sparcl1P70663 650 aa8.16□□□□□ -1.1
Lig4-202ENSMUST00000170033 Hecw2Q6I6G8 1578 aa8.16□□□□□ -1.1
Lig4-202ENSMUST00000170033 Zfp444Q3TDV8 331 aaKnown RBP8.16□□□□□ -1.1
Lig4-202ENSMUST00000170033 Slc52a2Q9D8F3 450 aa8.16□□□□□ -1.1
Lig4-202ENSMUST00000170033 Map3k5O35099 1380 aa8.16□□□□□ -1.1
Lig4-202ENSMUST00000170033 Znf608Q56A10 1511 aa8.15□□□□□ -1.1
Lig4-202ENSMUST00000170033 Ipo9Q91YE6 1041 aa8.15□□□□□ -1.1
Lig4-202ENSMUST00000170033 PalldQ9ET54 1408 aa8.15□□□□□ -1.1
Lig4-202ENSMUST00000170033 PtprtQ99M80 1454 aa8.15□□□□□ -1.1
Lig4-202ENSMUST00000170033 Ppp2r1aQ76MZ3 589 aa8.15□□□□□ -1.11
Lig4-202ENSMUST00000170033 Slc24a1Q91WD8 1130 aa8.15□□□□□ -1.11
Lig4-202ENSMUST00000170033 Knl1Q66JQ7 1612 aa8.14□□□□□ -1.11
Lig4-202ENSMUST00000170033 AatkQ80YE4 1365 aa8.14□□□□□ -1.11
Lig4-202ENSMUST00000170033 Usp32F8VPZ3 1604 aa8.14□□□□□ -1.11
Lig4-202ENSMUST00000170033 Erbb3Q61526 1339 aa8.13□□□□□ -1.11
Lig4-202ENSMUST00000170033 Nrxn1Q9CS84 1514 aa8.13□□□□□ -1.11
Lig4-202ENSMUST00000170033 Map4k4P97820 1233 aaKnown RBP8.13□□□□□ -1.11
Lig4-202ENSMUST00000170033 Ralbp1Q62172 648 aa8.13□□□□□ -1.11
Lig4-202ENSMUST00000170033 Gtf2e1Q9D0D5 440 aa8.13□□□□□ -1.11
Lig4-202ENSMUST00000170033 Tmc1Q8R4P5 757 aa8.13□□□□□ -1.11
Lig4-202ENSMUST00000170033 PplQ9R269 1755 aa8.13□□□□□ -1.11
Lig4-202ENSMUST00000170033 Gtf2a1Q99PM3 378 aa8.12□□□□□ -1.11
Lig4-202ENSMUST00000170033 Iqcf3Q9D498 203 aa8.12□□□□□ -1.11
Lig4-202ENSMUST00000170033 Kif16bB1AVY7 1312 aa8.12□□□□□ -1.11
Lig4-202ENSMUST00000170033 Inpp5dQ9ES52 1191 aa8.12□□□□□ -1.11
Lig4-202ENSMUST00000170033 Mapk8ip3Q9ESN9 1337 aa8.12□□□□□ -1.11
Lig4-202ENSMUST00000170033 Zc3h13E9Q784 1729 aaKnown RBP8.12□□□□□ -1.11
Lig4-202ENSMUST00000170033 Dip2cE9PWR4 1557 aa8.12□□□□□ -1.11
Lig4-202ENSMUST00000170033 Slc4a3P16283 1227 aa8.12□□□□□ -1.11
Lig4-202ENSMUST00000170033 Rab11fip3Q8CHD8 1047 aa8.12□□□□□ -1.11
Lig4-202ENSMUST00000170033 Iqsec2Q5DU25 1478 aa8.11□□□□□ -1.11
Lig4-202ENSMUST00000170033 Arhgap23Q69ZH9 1483 aa8.11□□□□□ -1.11
Lig4-202ENSMUST00000170033 Plekhg1F6S200 1446 aa8.11□□□□□ -1.11
Retrieved 100 of 22,080 RNA–protein pairs in 31.6 ms