RNA–Protein interactions for RNA: ENSMUST00000114779.8

Ssbp1-202, Transcript of Single-stranded DNA-binding protein, mitochondrial, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ssbp1, Length 4,398 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ssbp1-202ENSMUST00000114779 Fnbp4Q6ZQ03 1031 aa10.13□□□□□ -0.79
Ssbp1-202ENSMUST00000114779 Rreb1Q3UH06 1700 aaKnown RBP10.12□□□□□ -0.79
Ssbp1-202ENSMUST00000114779 Kif7B7ZNG0 1348 aa10.12□□□□□ -0.79
Ssbp1-202ENSMUST00000114779 Farp2Q91VS8 1065 aa10.12□□□□□ -0.79
Ssbp1-202ENSMUST00000114779 Lrrc7Q80TE7 1490 aa10.12□□□□□ -0.79
Ssbp1-202ENSMUST00000114779 Stag3O70576 1240 aa10.12□□□□□ -0.79
Ssbp1-202ENSMUST00000114779 Nyap1Q6PFX7 833 aa10.12□□□□□ -0.79
Ssbp1-202ENSMUST00000114779 Emilin2Q8K482 1074 aa10.11□□□□□ -0.79
Ssbp1-202ENSMUST00000114779 Kif24Q6NWW5 1356 aa10.11□□□□□ -0.79
Ssbp1-202ENSMUST00000114779 Ybx3Q9JKB3 361 aaKnown RBP10.1□□□□□ -0.79
Ssbp1-202ENSMUST00000114779 Ap3b2Q9JME5 1082 aa10.1□□□□□ -0.79
Ssbp1-202ENSMUST00000114779 Sirt1Q923E4 737 aa10.09□□□□□ -0.79
Ssbp1-202ENSMUST00000114779 Polr3aB2RXC6 1390 aa10.09□□□□□ -0.79
Ssbp1-202ENSMUST00000114779 NinlQ6ZQ12 1394 aa10.09□□□□□ -0.79
Ssbp1-202ENSMUST00000114779 Grwd1Q810D6 446 aaKnown RBP10.08□□□□□ -0.8
Ssbp1-202ENSMUST00000114779 Ift172Q6VH22 1749 aa10.08□□□□□ -0.8
Ssbp1-202ENSMUST00000114779 Adamts13Q769J6 1426 aa10.08□□□□□ -0.8
Ssbp1-202ENSMUST00000114779 Kif20bQ80WE4 1774 aaKnown RBP10.08□□□□□ -0.8
Ssbp1-202ENSMUST00000114779 Atp2b2Q9R0K7 1198 aa10.07□□□□□ -0.8
Ssbp1-202ENSMUST00000114779 Eid3Q3V124 375 aa10.07□□□□□ -0.8
Ssbp1-202ENSMUST00000114779 Usp40Q8BWR4 1235 aa10.07□□□□□ -0.8
Ssbp1-202ENSMUST00000114779 Gtf2e1Q9D0D5 440 aa10.07□□□□□ -0.8
Ssbp1-202ENSMUST00000114779 CenpjQ569L8 1344 aa10.07□□□□□ -0.8
Ssbp1-202ENSMUST00000114779 PtprvP70289 1705 aa10.07□□□□□ -0.8
Ssbp1-202ENSMUST00000114779 C3P01027 1663 aa10.06□□□□□ -0.8
Ssbp1-202ENSMUST00000114779 HdgfP51859 237 aaKnown RBP10.06□□□□□ -0.8
Ssbp1-202ENSMUST00000114779 NalcnQ8BXR5 1738 aa10.06□□□□□ -0.8
Ssbp1-202ENSMUST00000114779 Cadps2Q8BYR5 1297 aa10.05□□□□□ -0.8
Ssbp1-202ENSMUST00000114779 Itsn2Q9Z0R6 1659 aa10.05□□□□□ -0.8
Ssbp1-202ENSMUST00000114779 Kif1aP33173 1695 aa10.05□□□□□ -0.8
Ssbp1-202ENSMUST00000114779 Gm16486A0A1D5RMD1 1434 aa10.05□□□□□ -0.8
Ssbp1-202ENSMUST00000114779 Myt1Q8CFC2 1127 aa10.05□□□□□ -0.8
Ssbp1-202ENSMUST00000114779 Tmem2Q5FWI3 1383 aa10.05□□□□□ -0.8
Ssbp1-202ENSMUST00000114779 Atp7bQ64446 1462 aa10.05□□□□□ -0.8
Ssbp1-202ENSMUST00000114779 GnpatP98192 678 aa10.05□□□□□ -0.8
Ssbp1-202ENSMUST00000114779 Neurod1Q60867 357 aa10.05□□□□□ -0.8
Ssbp1-202ENSMUST00000114779 Dmrt2Q8BG36 561 aa10.05□□□□□ -0.8
Ssbp1-202ENSMUST00000114779 Cpsf1Q9EPU4 1441 aaKnown RBP10.04□□□□□ -0.8
Ssbp1-202ENSMUST00000114779 Hspa5P20029 655 aaKnown RBP10.04□□□□□ -0.8
Ssbp1-202ENSMUST00000114779 ZgpatQ8VDM1 511 aa10.04□□□□□ -0.8
Ssbp1-202ENSMUST00000114779 Slit2Q9R1B9 1521 aa10.03□□□□□ -0.8
Ssbp1-202ENSMUST00000114779 D430041D05RikF6ZGR6 1678 aa10.03□□□□□ -0.8
Ssbp1-202ENSMUST00000114779 Wnk3Q80XP9 1757 aa10.03□□□□□ -0.8
Ssbp1-202ENSMUST00000114779 Nphp4P59240 1425 aa10.03□□□□□ -0.8
Ssbp1-202ENSMUST00000114779 Cntnap1O54991 1385 aa10.03□□□□□ -0.8
Ssbp1-202ENSMUST00000114779 Abcc10Q8R4P9 1501 aa10.03□□□□□ -0.8
Ssbp1-202ENSMUST00000114779 Fam135bQ9DAI6 1403 aa10.03□□□□□ -0.8
Ssbp1-202ENSMUST00000114779 Zfp142G5E869 1843 aa10.02□□□□□ -0.8
Ssbp1-202ENSMUST00000114779 Mink1Q9JM52 1308 aa10.02□□□□□ -0.8
Ssbp1-202ENSMUST00000114779 Sema6bO54951 886 aa10.02□□□□□ -0.81
Ssbp1-202ENSMUST00000114779 Lrrc59Q922Q8 307 aaKnown RBP10.02□□□□□ -0.81
Ssbp1-202ENSMUST00000114779 Sox12Q04890 314 aa10.01□□□□□ -0.81
Ssbp1-202ENSMUST00000114779 FanciQ8K368 1330 aa10.01□□□□□ -0.81
Ssbp1-202ENSMUST00000114779 Kcna4Q61423 654 aa10.01□□□□□ -0.81
Ssbp1-202ENSMUST00000114779 Srcin1Q9QWI6 1250 aa10.01□□□□□ -0.81
Ssbp1-202ENSMUST00000114779 Arhgef1Q61210 920 aaKnown RBP10□□□□□ -0.81
Ssbp1-202ENSMUST00000114779 Pik3c2bE9QAN8 1632 aa10□□□□□ -0.81
Ssbp1-202ENSMUST00000114779 Atp10bB1AWN4 1474 aa10□□□□□ -0.81
Ssbp1-202ENSMUST00000114779 Acin1Q9JIX8 1338 aaKnown RBP10□□□□□ -0.81
Ssbp1-202ENSMUST00000114779 Siglec1Q62230 1695 aa10□□□□□ -0.81
Ssbp1-202ENSMUST00000114779 Fyb1O35601 819 aa10□□□□□ -0.81
Ssbp1-202ENSMUST00000114779 C5P06684 1680 aa10□□□□□ -0.81
Ssbp1-202ENSMUST00000114779 Wdr17E9Q271 1322 aa10□□□□□ -0.81
Ssbp1-202ENSMUST00000114779 Gsto1O09131 240 aa10□□□□□ -0.81
Ssbp1-202ENSMUST00000114779 Cdk5rap2Q8K389 1822 aa9.99□□□□□ -0.81
Ssbp1-202ENSMUST00000114779 Cep170bQ80U49 1574 aa9.99□□□□□ -0.81
Ssbp1-202ENSMUST00000114779 NgefQ8CHT1 710 aa9.99□□□□□ -0.81
Ssbp1-202ENSMUST00000114779 Camta1A2A891 1682 aa9.99□□□□□ -0.81
Ssbp1-202ENSMUST00000114779 InhbeO08717 350 aa9.98□□□□□ -0.81
Ssbp1-202ENSMUST00000114779 Cdk19Q8BWD8 501 aa9.98□□□□□ -0.81
Ssbp1-202ENSMUST00000114779 Idi1P58044 227 aa9.98□□□□□ -0.81
Ssbp1-202ENSMUST00000114779 Znf526Q8BI66 675 aa9.98□□□□□ -0.81
Ssbp1-202ENSMUST00000114779 Tex14Q7M6U3 1450 aa9.98□□□□□ -0.81
Ssbp1-202ENSMUST00000114779 Als2Q920R0 1651 aa9.98□□□□□ -0.81
Ssbp1-202ENSMUST00000114779 Bcl2l12Q9D3J3 255 aa9.98□□□□□ -0.81
Ssbp1-202ENSMUST00000114779 Exosc9Q9JHI7 438 aaKnown RBP9.98□□□□□ -0.81
Ssbp1-202ENSMUST00000114779 Usp32F8VPZ3 1604 aa9.97□□□□□ -0.81
Ssbp1-202ENSMUST00000114779 Zranb1Q7M760 708 aa9.97□□□□□ -0.81
Ssbp1-202ENSMUST00000114779 Gimap6Q8K349 305 aa9.97□□□□□ -0.81
Ssbp1-202ENSMUST00000114779 Nhsl1Q8CAF4 1587 aa9.97□□□□□ -0.81
Ssbp1-202ENSMUST00000114779 Marf1Q8BJ34 1730 aaKnown RBP9.97□□□□□ -0.81
Ssbp1-202ENSMUST00000114779 MypopQ8R4U1 393 aa9.97□□□□□ -0.81
Ssbp1-202ENSMUST00000114779 Zmym3Q9JLM4 1370 aa9.97□□□□□ -0.81
Ssbp1-202ENSMUST00000114779 Sipa1l2Q80TE4 1722 aa9.96□□□□□ -0.81
Ssbp1-202ENSMUST00000114779 Idi2Q8BFZ6 227 aa9.96□□□□□ -0.81
Ssbp1-202ENSMUST00000114779 Card11Q8CIS0 1159 aa9.96□□□□□ -0.82
Ssbp1-202ENSMUST00000114779 Ddx54Q8K4L0 874 aaKnown RBP9.96□□□□□ -0.82
Ssbp1-202ENSMUST00000114779 TimelessQ9R1X4 1197 aa9.96□□□□□ -0.82
Ssbp1-202ENSMUST00000114779 RalgapbQ8BQZ4 1484 aa9.95□□□□□ -0.82
Ssbp1-202ENSMUST00000114779 Rock2P70336 1388 aa9.95□□□□□ -0.82
Ssbp1-202ENSMUST00000114779 Znf335A2A5K6 1337 aa9.95□□□□□ -0.82
Ssbp1-202ENSMUST00000114779 N4bp2F8VQG7 1678 aaKnown RBP9.94□□□□□ -0.82
Ssbp1-202ENSMUST00000114779 Sipa1l1Q8C0T5 1782 aa9.94□□□□□ -0.82
Ssbp1-202ENSMUST00000114779 Scaf1Q5U4C3 1256 aaKnown RBP9.94□□□□□ -0.82
Ssbp1-202ENSMUST00000114779 Dixdc1Q80Y83 711 aa9.94□□□□□ -0.82
Ssbp1-202ENSMUST00000114779 Abca14E9Q8F8 1683 aa9.93□□□□□ -0.82
Ssbp1-202ENSMUST00000114779 Rundc1Q0VDN7 615 aa9.93□□□□□ -0.82
Ssbp1-202ENSMUST00000114779 Ddx17Q501J6 650 aaKnown RBP9.93□□□□□ -0.82
Ssbp1-202ENSMUST00000114779 InsrP15208 1372 aa9.93□□□□□ -0.82
Ssbp1-202ENSMUST00000114779 Mug2P28666 1451 aa9.93□□□□□ -0.82
Retrieved 100 of 22,080 RNA–protein pairs in 43.4 ms