RNA–Protein interactions for RNA: ENSMUST00000107935.7

Shank1-202, Transcript of SH3 and multiple ankyrin repeat domains protein 1, mousemouse

APPRIS ALT2 TSL 5 BASIC

Gene Shank1, Length 6,649 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Shank1-202ENSMUST00000107935 Stk31Q99MW1 1018 aa18.03■□□□□ 0.48
Shank1-202ENSMUST00000107935 Erlin2Q8BFZ9 340 aa18.03■□□□□ 0.48
Shank1-202ENSMUST00000107935 Nat10Q8K224 1024 aaKnown RBP18.03■□□□□ 0.48
Shank1-202ENSMUST00000107935 Usp47Q8BY87 1376 aa18.02■□□□□ 0.48
Shank1-202ENSMUST00000107935 CenphQ9QYM8 241 aa18.02■□□□□ 0.48
Shank1-202ENSMUST00000107935 CenpjQ569L8 1344 aa18.02■□□□□ 0.48
Shank1-202ENSMUST00000107935 Kcnj4P52189 445 aa18.02■□□□□ 0.48
Shank1-202ENSMUST00000107935 Cyp46a1Q9WVK8 500 aa18.02■□□□□ 0.48
Shank1-202ENSMUST00000107935 Ccdc30Q8BVF4 654 aa18.01■□□□□ 0.47
Shank1-202ENSMUST00000107935 Psma5Q9Z2U1 241 aaKnown RBP18.01■□□□□ 0.47
Shank1-202ENSMUST00000107935 Sptbn5F6UCX4 1208 aa18.01■□□□□ 0.47
Shank1-202ENSMUST00000107935 Gm42641I6L9G2 585 aa18.01■□□□□ 0.47
Shank1-202ENSMUST00000107935 AtripQ8BMG1 785 aa18.01■□□□□ 0.47
Shank1-202ENSMUST00000107935 TnmdQ9EP64 317 aa18.01■□□□□ 0.47
Shank1-202ENSMUST00000107935 SelenooQ9DBC0 667 aa18■□□□□ 0.47
Shank1-202ENSMUST00000107935 Stk11ipQ3TAA7 1072 aa17.99■□□□□ 0.47
Shank1-202ENSMUST00000107935 Erc2Q6PH08 957 aa17.99■□□□□ 0.47
Shank1-202ENSMUST00000107935 Gtf2f1Q3THK3 508 aaKnown RBP17.98■□□□□ 0.47
Shank1-202ENSMUST00000107935 MlecQ6ZQI3 291 aaKnown RBP17.98■□□□□ 0.47
Shank1-202ENSMUST00000107935 SkilQ60665 675 aa17.98■□□□□ 0.47
Shank1-202ENSMUST00000107935 Gse1Q3U3C9 1213 aa17.98■□□□□ 0.47
Shank1-202ENSMUST00000107935 Kiaa0753Q6A000 959 aa17.98■□□□□ 0.47
Shank1-202ENSMUST00000107935 Ric3Q8BPM6 367 aa17.98■□□□□ 0.47
Shank1-202ENSMUST00000107935 Aebp1Q640N1 1128 aa17.98■□□□□ 0.47
Shank1-202ENSMUST00000107935 Ccdc88bQ4QRL3 1481 aa17.97■□□□□ 0.47
Shank1-202ENSMUST00000107935 Phldb2Q8K1N2 1249 aa17.97■□□□□ 0.47
Shank1-202ENSMUST00000107935 MicalclQ9D5U9 680 aa17.97■□□□□ 0.47
Shank1-202ENSMUST00000107935 Babam1Q3UI43 333 aa17.97■□□□□ 0.47
Shank1-202ENSMUST00000107935 Washc2Q6PGL7 1334 aa17.97■□□□□ 0.47
Shank1-202ENSMUST00000107935 Mcm2P97310 904 aa17.96■□□□□ 0.47
Shank1-202ENSMUST00000107935 Q8C5K5 320 aa17.96■□□□□ 0.47
Shank1-202ENSMUST00000107935 Plekhh2Q8C115 1491 aa17.96■□□□□ 0.47
Shank1-202ENSMUST00000107935 Map9Q3TRR0 646 aa17.96■□□□□ 0.46
Shank1-202ENSMUST00000107935 Rnf187Q8BFX1 236 aa17.96■□□□□ 0.46
Shank1-202ENSMUST00000107935 Zhx1P70121 873 aa17.95■□□□□ 0.46
Shank1-202ENSMUST00000107935 Trim29Q8R2Q0 587 aa17.95■□□□□ 0.46
Shank1-202ENSMUST00000107935 NexnQ7TPW1 607 aa17.95■□□□□ 0.46
Shank1-202ENSMUST00000107935 Secisbp2lQ6A098 1086 aaKnown RBP17.95■□□□□ 0.46
Shank1-202ENSMUST00000107935 Jakmip2D3YXK0 820 aa17.94■□□□□ 0.46
Shank1-202ENSMUST00000107935 Slu7Q8BHJ9 585 aa17.94■□□□□ 0.46
Shank1-202ENSMUST00000107935 Pmfbp1Q9WVQ0 1022 aa17.94■□□□□ 0.46
Shank1-202ENSMUST00000107935 Rpgrip1lQ8CG73 1264 aa17.94■□□□□ 0.46
Shank1-202ENSMUST00000107935 Ccp110Q7TSH4 1004 aa17.93■□□□□ 0.46
Shank1-202ENSMUST00000107935 Med4Q9CQA5 270 aa17.93■□□□□ 0.46
Shank1-202ENSMUST00000107935 Sox12Q04890 314 aa17.93■□□□□ 0.46
Shank1-202ENSMUST00000107935 Fam184aE9PW83 1143 aa17.93■□□□□ 0.46
Shank1-202ENSMUST00000107935 Fam184bQ0KK56 942 aa17.93■□□□□ 0.46
Shank1-202ENSMUST00000107935 Eif3aP23116 1344 aaKnown RBP17.93■□□□□ 0.46
Shank1-202ENSMUST00000107935 Dnaaf4Q8R368 420 aa17.92■□□□□ 0.46
Shank1-202ENSMUST00000107935 Mctp1E9PV86 951 aa17.92■□□□□ 0.46
Shank1-202ENSMUST00000107935 Me1P06801 572 aa17.92■□□□□ 0.46
Shank1-202ENSMUST00000107935 Zscan10Q3URR7 782 aa17.92■□□□□ 0.46
Shank1-202ENSMUST00000107935 Syce3B5KM66 88 aa17.91■□□□□ 0.46
Shank1-202ENSMUST00000107935 Pdcl2Q78Y63 240 aa17.91■□□□□ 0.46
Shank1-202ENSMUST00000107935 Lamb3Q61087 1168 aa17.91■□□□□ 0.46
Shank1-202ENSMUST00000107935 Smc4Q8CG47 1286 aa17.91■□□□□ 0.46
Shank1-202ENSMUST00000107935 Nutm1Q8BHP2 1126 aa17.91■□□□□ 0.46
Shank1-202ENSMUST00000107935 Cfap58B2RW38 873 aa17.9■□□□□ 0.46
Shank1-202ENSMUST00000107935 Exoc8Q6PGF7 716 aa17.9■□□□□ 0.46
Shank1-202ENSMUST00000107935 CenpqQ9CPQ5 267 aa17.9■□□□□ 0.46
Shank1-202ENSMUST00000107935 Stk3Q9JI10 497 aa17.9■□□□□ 0.46
Shank1-202ENSMUST00000107935 Abcd1P48410 736 aa17.9■□□□□ 0.46
Shank1-202ENSMUST00000107935 Fan1Q69ZT1 1020 aa17.9■□□□□ 0.46
Shank1-202ENSMUST00000107935 Dapk1Q80YE7 1442 aa17.9■□□□□ 0.46
Shank1-202ENSMUST00000107935 Stk38Q91VJ4 465 aa17.89■□□□□ 0.45
Shank1-202ENSMUST00000107935 TxlnbQ8VBT1 685 aa17.89■□□□□ 0.45
Shank1-202ENSMUST00000107935 Zkscan2G3X952 960 aa17.89■□□□□ 0.45
Shank1-202ENSMUST00000107935 Fnbp4Q6ZQ03 1031 aa17.89■□□□□ 0.45
Shank1-202ENSMUST00000107935 Usp16Q99LG0 825 aa17.89■□□□□ 0.45
Shank1-202ENSMUST00000107935 Ccdc96Q9CR92 584 aa17.88■□□□□ 0.45
Shank1-202ENSMUST00000107935 Psme1P97371 249 aa17.88■□□□□ 0.45
Shank1-202ENSMUST00000107935 Nup88Q8CEC0 753 aaKnown RBP17.88■□□□□ 0.45
Shank1-202ENSMUST00000107935 Samm50Q8BGH2 469 aa17.88■□□□□ 0.45
Shank1-202ENSMUST00000107935 Rbm25B2RY56 838 aaKnown RBP17.88■□□□□ 0.45
Shank1-202ENSMUST00000107935 Neurod6P48986 337 aa17.88■□□□□ 0.45
Shank1-202ENSMUST00000107935 Nectin2P32507 530 aa17.87■□□□□ 0.45
Shank1-202ENSMUST00000107935 Hvcn1Q3U2S8 269 aa17.87■□□□□ 0.45
Shank1-202ENSMUST00000107935 Smc2Q8CG48 1191 aaKnown RBP17.87■□□□□ 0.45
Shank1-202ENSMUST00000107935 Slc13a4Q8BZ82 625 aa17.87■□□□□ 0.45
Shank1-202ENSMUST00000107935 Rab11fip3Q8CHD8 1047 aa17.87■□□□□ 0.45
Shank1-202ENSMUST00000107935 Ciz1Q8VEH2 845 aa17.87■□□□□ 0.45
Shank1-202ENSMUST00000107935 Cnnm3Q32NY4 713 aa17.87■□□□□ 0.45
Shank1-202ENSMUST00000107935 Arid3cA6PWV5 409 aa17.87■□□□□ 0.45
Shank1-202ENSMUST00000107935 Pip4k2aO70172 405 aa17.87■□□□□ 0.45
Shank1-202ENSMUST00000107935 UacaQ8CGB3 1411 aa17.86■□□□□ 0.45
Shank1-202ENSMUST00000107935 Commd10Q8JZY2 202 aa17.86■□□□□ 0.45
Shank1-202ENSMUST00000107935 PdiltQ9DAN1 588 aa17.86■□□□□ 0.45
Shank1-202ENSMUST00000107935 Krt85Q9Z2T6 507 aa17.86■□□□□ 0.45
Shank1-202ENSMUST00000107935 PnisrA2AJT4 805 aaKnown RBP17.86■□□□□ 0.45
Shank1-202ENSMUST00000107935 Plcd3Q8K2J0 785 aa17.86■□□□□ 0.45
Shank1-202ENSMUST00000107935 Gnl2Q99LH1 728 aaKnown RBP17.86■□□□□ 0.45
Shank1-202ENSMUST00000107935 Trim25Q61510 634 aaKnown RBP17.85■□□□□ 0.45
Shank1-202ENSMUST00000107935 Luc7lQ9CYI4 371 aaKnown RBP17.85■□□□□ 0.45
Shank1-202ENSMUST00000107935 Gnai1B2RSH2 354 aa17.84■□□□□ 0.45
Shank1-202ENSMUST00000107935 Gnai3Q9DC51 354 aa17.84■□□□□ 0.45
Shank1-202ENSMUST00000107935 Rcan3Q9JKK0 239 aa17.84■□□□□ 0.45
Shank1-202ENSMUST00000107935 IncenpQ9WU62 880 aa17.84■□□□□ 0.45
Shank1-202ENSMUST00000107935 Fmn1Q05860 1466 aa17.84■□□□□ 0.45
Shank1-202ENSMUST00000107935 Q9D9S1 216 aa17.84■□□□□ 0.45
Shank1-202ENSMUST00000107935 Kcnh8P59111 1102 aa17.84■□□□□ 0.45
Retrieved 100 of 22,080 RNA–protein pairs in 7.1 ms