Protein–RNA interactions for Protein: Q8BFX1

Rnf187, E3 ubiquitin-protein ligase RNF187, mousemouse

Predictions only

Length 236 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf187Q8BFX1 Gm25239-201ENSMUST00000174915 86 ntBASIC37.9■■■■□ 3.66
Rnf187Q8BFX1 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC35.54■■■■□ 3.28
Rnf187Q8BFX1 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC34.79■■■■□ 3.16
Rnf187Q8BFX1 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC34.44■■■■□ 3.1
Rnf187Q8BFX1 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC34.19■■■■□ 3.06
Rnf187Q8BFX1 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC34.16■■■■□ 3.06
Rnf187Q8BFX1 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC33.99■■■■□ 3.03
Rnf187Q8BFX1 Gm15042-201ENSMUST00000120212 883 ntBASIC33.66■■■□□ 2.98
Rnf187Q8BFX1 Psd-208ENSMUST00000224556 2034 ntBASIC33.51■■■□□ 2.95
Rnf187Q8BFX1 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC33.4■■■□□ 2.94
Rnf187Q8BFX1 Gm15045-201ENSMUST00000117359 883 ntBASIC32.96■■■□□ 2.87
Rnf187Q8BFX1 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC32.73■■■□□ 2.83
Rnf187Q8BFX1 Gm24109-201ENSMUST00000175489 103 ntBASIC32.59■■■□□ 2.81
Rnf187Q8BFX1 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC32.47■■■□□ 2.79
Rnf187Q8BFX1 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC32.15■■■□□ 2.74
Rnf187Q8BFX1 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC32.13■■■□□ 2.73
Rnf187Q8BFX1 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC32.1■■■□□ 2.73
Rnf187Q8BFX1 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC31.97■■■□□ 2.71
Rnf187Q8BFX1 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC31.9■■■□□ 2.7
Rnf187Q8BFX1 Gm23366-201ENSMUST00000175022 89 ntBASIC31.79■■■□□ 2.68
Rnf187Q8BFX1 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC31.78■■■□□ 2.68
Rnf187Q8BFX1 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC31.76■■■□□ 2.68
Rnf187Q8BFX1 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC31.74■■■□□ 2.67
Rnf187Q8BFX1 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC31.74■■■□□ 2.67
Rnf187Q8BFX1 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC31.64■■■□□ 2.66
Rnf187Q8BFX1 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC31.64■■■□□ 2.66
Rnf187Q8BFX1 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC31.56■■■□□ 2.64
Rnf187Q8BFX1 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC31.56■■■□□ 2.64
Rnf187Q8BFX1 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC31.49■■■□□ 2.63
Rnf187Q8BFX1 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC31.43■■■□□ 2.62
Rnf187Q8BFX1 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC31.42■■■□□ 2.62
Rnf187Q8BFX1 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC31.41■■■□□ 2.62
Rnf187Q8BFX1 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC31.39■■■□□ 2.62
Rnf187Q8BFX1 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC31.38■■■□□ 2.61
Rnf187Q8BFX1 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC31.34■■■□□ 2.61
Rnf187Q8BFX1 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC31.28■■■□□ 2.6
Rnf187Q8BFX1 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC31.22■■■□□ 2.59
Rnf187Q8BFX1 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC31.02■■■□□ 2.56
Rnf187Q8BFX1 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC30.98■■■□□ 2.55
Rnf187Q8BFX1 AC153911.1-202ENSMUST00000218534 1034 ntBASIC30.85■■■□□ 2.53
Rnf187Q8BFX1 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC30.82■■■□□ 2.52
Rnf187Q8BFX1 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC30.77■■■□□ 2.52
Rnf187Q8BFX1 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC30.74■■■□□ 2.51
Rnf187Q8BFX1 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC30.57■■■□□ 2.48
Rnf187Q8BFX1 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC30.52■■■□□ 2.48
Rnf187Q8BFX1 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC30.5■■■□□ 2.47
Rnf187Q8BFX1 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC30.42■■■□□ 2.46
Rnf187Q8BFX1 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC30.41■■■□□ 2.46
Rnf187Q8BFX1 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC30.41■■■□□ 2.46
Rnf187Q8BFX1 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC30.35■■■□□ 2.45
Rnf187Q8BFX1 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC30.34■■■□□ 2.45
Rnf187Q8BFX1 Gm42596-201ENSMUST00000196305 1958 ntBASIC30.34■■■□□ 2.45
Rnf187Q8BFX1 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC30.27■■■□□ 2.44
Rnf187Q8BFX1 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC30.18■■■□□ 2.42
Rnf187Q8BFX1 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC30.08■■■□□ 2.41
Rnf187Q8BFX1 Gm10524-201ENSMUST00000181931 1893 ntBASIC30.06■■■□□ 2.4
Rnf187Q8BFX1 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC30.05■■■□□ 2.4
Rnf187Q8BFX1 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC30.04■■■□□ 2.4
Rnf187Q8BFX1 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC30■■■□□ 2.39
Rnf187Q8BFX1 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC29.99■■■□□ 2.39
Rnf187Q8BFX1 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC29.89■■■□□ 2.38
Rnf187Q8BFX1 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC29.84■■■□□ 2.37
Rnf187Q8BFX1 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC29.84■■■□□ 2.37
Rnf187Q8BFX1 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC29.83■■■□□ 2.37
Rnf187Q8BFX1 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC29.82■■■□□ 2.36
Rnf187Q8BFX1 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC29.77■■■□□ 2.36
Rnf187Q8BFX1 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC29.76■■■□□ 2.35
Rnf187Q8BFX1 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC29.75■■■□□ 2.35
Rnf187Q8BFX1 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC29.73■■■□□ 2.35
Rnf187Q8BFX1 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC29.73■■■□□ 2.35
Rnf187Q8BFX1 Gm25238-201ENSMUST00000174914 89 ntBASIC29.72■■■□□ 2.35
Rnf187Q8BFX1 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC29.72■■■□□ 2.35
Rnf187Q8BFX1 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC29.67■■■□□ 2.34
Rnf187Q8BFX1 Gm27325-201ENSMUST00000175467 74 ntBASIC29.59■■■□□ 2.33
Rnf187Q8BFX1 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC29.59■■■□□ 2.33
Rnf187Q8BFX1 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC29.59■■■□□ 2.33
Rnf187Q8BFX1 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC29.56■■■□□ 2.32
Rnf187Q8BFX1 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC29.5■■■□□ 2.31
Rnf187Q8BFX1 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC29.49■■■□□ 2.31
Rnf187Q8BFX1 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC29.48■■■□□ 2.31
Rnf187Q8BFX1 CT025624.2-201ENSMUST00000223609 1909 ntBASIC29.46■■■□□ 2.31
Rnf187Q8BFX1 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC29.45■■■□□ 2.31
Rnf187Q8BFX1 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC29.45■■■□□ 2.3
Rnf187Q8BFX1 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC29.44■■■□□ 2.3
Rnf187Q8BFX1 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC29.43■■■□□ 2.3
Rnf187Q8BFX1 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC29.41■■■□□ 2.3
Rnf187Q8BFX1 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC29.3■■■□□ 2.28
Rnf187Q8BFX1 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC29.29■■■□□ 2.28
Rnf187Q8BFX1 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC29.29■■■□□ 2.28
Rnf187Q8BFX1 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC29.27■■■□□ 2.28
Rnf187Q8BFX1 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC29.19■■■□□ 2.26
Rnf187Q8BFX1 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC29.18■■■□□ 2.26
Rnf187Q8BFX1 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC29.13■■■□□ 2.25
Rnf187Q8BFX1 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC29.08■■■□□ 2.25
Rnf187Q8BFX1 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC29.05■■■□□ 2.24
Rnf187Q8BFX1 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC29.03■■■□□ 2.24
Rnf187Q8BFX1 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC29.03■■■□□ 2.24
Rnf187Q8BFX1 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC29.01■■■□□ 2.23
Rnf187Q8BFX1 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC29.01■■■□□ 2.23
Rnf187Q8BFX1 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC29■■■□□ 2.23
Retrieved 100 of 76,532 protein–RNA pairs in 14.2 ms