RNA–Protein interactions for RNA: ENSMUST00000107934.1

Shank1-201, Transcript of SH3 and multiple ankyrin repeat domains protein 1, mousemouse

APPRIS ALT2 TSL 5 BASIC

Gene Shank1, Length 6,477 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Shank1-201ENSMUST00000107934 4933402E13RikQ9D4D2 429 aa18.99■□□□□ 0.63
Shank1-201ENSMUST00000107934 VgfQ0VGU4 617 aa18.99■□□□□ 0.63
Shank1-201ENSMUST00000107934 Gnl3lQ6PGG6 577 aaKnown RBP18.99■□□□□ 0.63
Shank1-201ENSMUST00000107934 Cnnm1Q0GA42 951 aa18.98■□□□□ 0.63
Shank1-201ENSMUST00000107934 Kif4P33174 1231 aa18.98■□□□□ 0.63
Shank1-201ENSMUST00000107934 UvssaQ9D479 717 aa18.98■□□□□ 0.63
Shank1-201ENSMUST00000107934 Me1P06801 572 aa18.97■□□□□ 0.63
Shank1-201ENSMUST00000107934 HypkQ9CR41 129 aa18.97■□□□□ 0.63
Shank1-201ENSMUST00000107934 Ipo7Q9EPL8 1038 aaKnown RBP18.96■□□□□ 0.63
Shank1-201ENSMUST00000107934 Mad1l1Q9WTX8 717 aaKnown RBP18.96■□□□□ 0.63
Shank1-201ENSMUST00000107934 Gprasp1Q5U4C1 1347 aa18.96■□□□□ 0.63
Shank1-201ENSMUST00000107934 Dennd6aQ8BH65 605 aa18.96■□□□□ 0.63
Shank1-201ENSMUST00000107934 Hook1Q8BIL5 728 aa18.96■□□□□ 0.63
Shank1-201ENSMUST00000107934 Wdr78E9PYY5 807 aa18.96■□□□□ 0.63
Shank1-201ENSMUST00000107934 Plekhh1Q80TI1 1356 aa18.96■□□□□ 0.63
Shank1-201ENSMUST00000107934 Paf1Q8K2T8 535 aa18.95■□□□□ 0.62
Shank1-201ENSMUST00000107934 Rbm5Q91YE7 815 aaKnown RBP18.95■□□□□ 0.62
Shank1-201ENSMUST00000107934 Ppp2r1aQ76MZ3 589 aa18.95■□□□□ 0.62
Shank1-201ENSMUST00000107934 Arid4aF8VPQ2 1261 aaKnown RBP18.95■□□□□ 0.62
Shank1-201ENSMUST00000107934 Atl3Q91YH5 541 aa18.95■□□□□ 0.62
Shank1-201ENSMUST00000107934 March6Q6ZQ89 909 aa18.95■□□□□ 0.62
Shank1-201ENSMUST00000107934 Gpatch3Q8BIY1 525 aa18.95■□□□□ 0.62
Shank1-201ENSMUST00000107934 Gm21698A0A087WQP8 267 aa18.94■□□□□ 0.62
Shank1-201ENSMUST00000107934 Gm21671G3UY31 267 aa18.94■□□□□ 0.62
Shank1-201ENSMUST00000107934 Ddx54Q8K4L0 874 aaKnown RBP18.94■□□□□ 0.62
Shank1-201ENSMUST00000107934 Hnrnpul1Q8VDM6 859 aaKnown RBP18.94■□□□□ 0.62
Shank1-201ENSMUST00000107934 Abl1P00520 1123 aa18.94■□□□□ 0.62
Shank1-201ENSMUST00000107934 Gripap1Q8VD04 806 aa18.94■□□□□ 0.62
Shank1-201ENSMUST00000107934 Nek4Q9Z1J2 792 aa18.94■□□□□ 0.62
Shank1-201ENSMUST00000107934 Ccdc171E9Q1U1 1324 aa18.94■□□□□ 0.62
Shank1-201ENSMUST00000107934 Fam193aQ8CGI1 1231 aaKnown RBP18.94■□□□□ 0.62
Shank1-201ENSMUST00000107934 Cetn4Q8K4K1 168 aa18.94■□□□□ 0.62
Shank1-201ENSMUST00000107934 Ush1cQ9ES64 910 aa18.94■□□□□ 0.62
Shank1-201ENSMUST00000107934 Fmnl2A2APV2 1086 aa18.93■□□□□ 0.62
Shank1-201ENSMUST00000107934 Q7TT23 1179 aa18.93■□□□□ 0.62
Shank1-201ENSMUST00000107934 Cdk19Q8BWD8 501 aa18.93■□□□□ 0.62
Shank1-201ENSMUST00000107934 Fkbp4P30416 458 aa18.92■□□□□ 0.62
Shank1-201ENSMUST00000107934 Gtf2f1Q3THK3 508 aaKnown RBP18.92■□□□□ 0.62
Shank1-201ENSMUST00000107934 KarsQ99MN1 595 aaKnown RBP18.92■□□□□ 0.62
Shank1-201ENSMUST00000107934 Cabp2Q9JLK4 216 aa18.92■□□□□ 0.62
Shank1-201ENSMUST00000107934 Fgd6Q69ZL1 1399 aa18.92■□□□□ 0.62
Shank1-201ENSMUST00000107934 Rab3gap2Q8BMG7 1366 aa18.92■□□□□ 0.62
Shank1-201ENSMUST00000107934 Afap1Q80YS6 731 aa18.92■□□□□ 0.62
Shank1-201ENSMUST00000107934 Naip1Q9QWK5 1403 aa18.92■□□□□ 0.62
Shank1-201ENSMUST00000107934 PogkQ80TC5 607 aa18.92■□□□□ 0.62
Shank1-201ENSMUST00000107934 NrkQ9R0G8 1455 aa18.91■□□□□ 0.62
Shank1-201ENSMUST00000107934 Ftsj3Q9DBE9 838 aaKnown RBP18.91■□□□□ 0.62
Shank1-201ENSMUST00000107934 Myom3A2ABU4 1439 aa18.91■□□□□ 0.62
Shank1-201ENSMUST00000107934 Psma5Q9Z2U1 241 aaKnown RBP18.9■□□□□ 0.62
Shank1-201ENSMUST00000107934 Arhgef5E9Q7D5 1581 aa18.9■□□□□ 0.62
Shank1-201ENSMUST00000107934 Cchcr1Q8K2I2 770 aa18.9■□□□□ 0.62
Shank1-201ENSMUST00000107934 Cavin4A2AMM0 362 aa18.89■□□□□ 0.62
Shank1-201ENSMUST00000107934 Usp48Q3V0C5 1052 aa18.89■□□□□ 0.61
Shank1-201ENSMUST00000107934 Trim29Q8R2Q0 587 aa18.88■□□□□ 0.61
Shank1-201ENSMUST00000107934 Cfap99A0A140LIX9 648 aa18.88■□□□□ 0.61
Shank1-201ENSMUST00000107934 Grin2bQ01097 1482 aa18.88■□□□□ 0.61
Shank1-201ENSMUST00000107934 Nol12Q8BG17 217 aa18.88■□□□□ 0.61
Shank1-201ENSMUST00000107934 Apaf1O88879 1249 aa18.87■□□□□ 0.61
Shank1-201ENSMUST00000107934 Klf15Q9EPW2 415 aa18.87■□□□□ 0.61
Shank1-201ENSMUST00000107934 Ints3Q7TPD0 1041 aaKnown RBP18.86■□□□□ 0.61
Shank1-201ENSMUST00000107934 Gimap6Q8K349 305 aa18.86■□□□□ 0.61
Shank1-201ENSMUST00000107934 Agtpbp1Q641K1 1218 aa18.86■□□□□ 0.61
Shank1-201ENSMUST00000107934 Speer4bQ9D9F7 267 aa18.86■□□□□ 0.61
Shank1-201ENSMUST00000107934 Mrc2Q64449 1479 aa18.86■□□□□ 0.61
Shank1-201ENSMUST00000107934 Gm14025A2AP89 1413 aa18.86■□□□□ 0.61
Shank1-201ENSMUST00000107934 Hmgn5Q9JL35 406 aa18.85■□□□□ 0.61
Shank1-201ENSMUST00000107934 Kif3aP28741 701 aa18.85■□□□□ 0.61
Shank1-201ENSMUST00000107934 SkilQ60665 675 aa18.85■□□□□ 0.61
Shank1-201ENSMUST00000107934 Prkrip1Q9CWV6 186 aaKnown RBP18.85■□□□□ 0.61
Shank1-201ENSMUST00000107934 Zkscan2G3X952 960 aa18.85■□□□□ 0.61
Shank1-201ENSMUST00000107934 Ppp4r3bQ922R5 820 aa18.84■□□□□ 0.61
Shank1-201ENSMUST00000107934 Plekhd1B2RPU2 505 aa18.84■□□□□ 0.61
Shank1-201ENSMUST00000107934 Prm3Q62100 101 aa18.84■□□□□ 0.61
Shank1-201ENSMUST00000107934 Samd1D3YXK1 519 aa18.84■□□□□ 0.61
Shank1-201ENSMUST00000107934 Ccdc183A2AJB1 534 aa18.84■□□□□ 0.61
Shank1-201ENSMUST00000107934 Gnai2P08752 355 aaKnown RBP18.84■□□□□ 0.61
Shank1-201ENSMUST00000107934 Mcm2P97310 904 aa18.84■□□□□ 0.61
Shank1-201ENSMUST00000107934 Map7d2A2AG50 781 aa18.84■□□□□ 0.61
Shank1-201ENSMUST00000107934 Hdgfl1Q2VPR5 283 aa18.83■□□□□ 0.61
Shank1-201ENSMUST00000107934 Dhx9O70133 1380 aaKnown RBP18.83■□□□□ 0.61
Shank1-201ENSMUST00000107934 Ncbp3Q8BZR9 615 aaKnown RBP18.83■□□□□ 0.61
Shank1-201ENSMUST00000107934 Gm21663A0A0G2JE01 267 aa18.83■□□□□ 0.6
Shank1-201ENSMUST00000107934 Gm7361D3Z6R1 267 aa18.83■□□□□ 0.6
Shank1-201ENSMUST00000107934 5031410I06RikE9Q4E0 267 aa18.83■□□□□ 0.6
Shank1-201ENSMUST00000107934 Gm1979E9QAN3 267 aa18.83■□□□□ 0.6
Shank1-201ENSMUST00000107934 Gm5862K7N5V5 267 aa18.83■□□□□ 0.6
Shank1-201ENSMUST00000107934 Gm10220K7N660 267 aa18.83■□□□□ 0.6
Shank1-201ENSMUST00000107934 Kcnh8P59111 1102 aa18.83■□□□□ 0.6
Shank1-201ENSMUST00000107934 PogzQ8BZH4 1409 aaKnown RBP18.83■□□□□ 0.6
Shank1-201ENSMUST00000107934 Ppp2r3aB2RXC8 1150 aa18.83■□□□□ 0.6
Shank1-201ENSMUST00000107934 Rbm28Q8CGC6 750 aaKnown RBP18.82■□□□□ 0.6
Shank1-201ENSMUST00000107934 Washc4Q3UMB9 1173 aa18.82■□□□□ 0.6
Shank1-201ENSMUST00000107934 Odf2lQ9D478 642 aa18.82■□□□□ 0.6
Shank1-201ENSMUST00000107934 Stard3nlQ9DCI3 235 aa18.81■□□□□ 0.6
Shank1-201ENSMUST00000107934 Larp1bA0A0A6YXJ7 370 aaKnown RBP18.81■□□□□ 0.6
Shank1-201ENSMUST00000107934 Nphp1Q9QY53 687 aa18.81■□□□□ 0.6
Shank1-201ENSMUST00000107934 Arap1Q4LDD4 1452 aa18.81■□□□□ 0.6
Shank1-201ENSMUST00000107934 Dixdc1Q80Y83 711 aa18.81■□□□□ 0.6
Shank1-201ENSMUST00000107934 A0A0U1RNP2 1173 aa18.8■□□□□ 0.6
Shank1-201ENSMUST00000107934 Stk11ipQ3TAA7 1072 aa18.8■□□□□ 0.6
Retrieved 100 of 22,080 RNA–protein pairs in 26.3 ms