RNA–Protein interactions for RNA: ENSMUST00000107934.1

Shank1-201, Transcript of SH3 and multiple ankyrin repeat domains protein 1, mousemouse

APPRIS ALT2 TSL 5 BASIC

Gene Shank1, Length 6,477 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Shank1-201ENSMUST00000107934 Rhox8Q6VSS7 320 aa28.05■■■□□ 2.08
Shank1-201ENSMUST00000107934 Ehmt2Q9Z148 1263 aaKnown RBP25.11■■□□□ 1.61
Shank1-201ENSMUST00000107934 Rpgrip1Q9EPQ2 1331 aa24.96■■□□□ 1.59
Shank1-201ENSMUST00000107934 Esf1Q3V1V3 845 aaKnown RBP24.89■■□□□ 1.58
Shank1-201ENSMUST00000107934 Ccdc136Q3TVA9 1136 aa24.89■■□□□ 1.57
Shank1-201ENSMUST00000107934 Cngb1E1AZ71 1325 aa24.87■■□□□ 1.57
Shank1-201ENSMUST00000107934 Ube2uB1AUC4 352 aa24.5■■□□□ 1.51
Shank1-201ENSMUST00000107934 Zeb1Q64318 1117 aa24.47■■□□□ 1.51
Shank1-201ENSMUST00000107934 Wdr66E9Q743 1299 aa24.44■■□□□ 1.5
Shank1-201ENSMUST00000107934 Gab3Q8BSM5 595 aa24.42■■□□□ 1.5
Shank1-201ENSMUST00000107934 Las1lA2BE28 776 aaKnown RBP24.4■■□□□ 1.5
Shank1-201ENSMUST00000107934 Npm2Q80W85 207 aa24.34■■□□□ 1.49
Shank1-201ENSMUST00000107934 NischQ80TM9 1593 aa24.29■■□□□ 1.48
Shank1-201ENSMUST00000107934 Trim41Q5NCC3 630 aa24.25■■□□□ 1.47
Shank1-201ENSMUST00000107934 Myt1lP97500 1187 aa24.1■■□□□ 1.45
Shank1-201ENSMUST00000107934 Pelp1Q9DBD5 1123 aaKnown RBP23.74■■□□□ 1.39
Shank1-201ENSMUST00000107934 UbtfP25976 765 aaKnown RBP23.49■■□□□ 1.35
Shank1-201ENSMUST00000107934 Il27Q8K3I6 234 aa23.35■■□□□ 1.33
Shank1-201ENSMUST00000107934 NefmP08553 848 aa23.19■■□□□ 1.3
Shank1-201ENSMUST00000107934 Acin1Q9JIX8 1338 aaKnown RBP23.18■■□□□ 1.3
Shank1-201ENSMUST00000107934 Slc24a1Q91WD8 1130 aa23.18■■□□□ 1.3
Shank1-201ENSMUST00000107934 Ccdc180J3QNE4 1664 aa23.12■■□□□ 1.29
Shank1-201ENSMUST00000107934 Stra8P70278 393 aa23.03■■□□□ 1.28
Shank1-201ENSMUST00000107934 Abcc9P70170 1546 aa23.01■■□□□ 1.27
Shank1-201ENSMUST00000107934 Ap3b1Q9Z1T1 1105 aa23■■□□□ 1.27
Shank1-201ENSMUST00000107934 Zcchc6Q5BLK4 1491 aaKnown RBP22.97■■□□□ 1.27
Shank1-201ENSMUST00000107934 Rtl1Q7M732 1744 aa22.91■■□□□ 1.26
Shank1-201ENSMUST00000107934 CenpbP27790 599 aa22.91■■□□□ 1.26
Shank1-201ENSMUST00000107934 Gm35339A0A140LHH9 1649 aa22.89■■□□□ 1.25
Shank1-201ENSMUST00000107934 Fam50aQ9WV03 339 aaKnown RBP22.83■■□□□ 1.25
Shank1-201ENSMUST00000107934 HrcG5E8J6 738 aa22.82■■□□□ 1.24
Shank1-201ENSMUST00000107934 Amer1Q7TS75 1132 aa22.81■■□□□ 1.24
Shank1-201ENSMUST00000107934 Neurod1Q60867 357 aa22.77■■□□□ 1.24
Shank1-201ENSMUST00000107934 Os9Q8K2C7 672 aa22.7■■□□□ 1.22
Shank1-201ENSMUST00000107934 NclP09405 707 aaKnown RBP22.61■■□□□ 1.21
Shank1-201ENSMUST00000107934 NrdcQ8BHG1 1161 aa22.58■■□□□ 1.21
Shank1-201ENSMUST00000107934 Anp32bQ9EST5 272 aaKnown RBP22.58■■□□□ 1.21
Shank1-201ENSMUST00000107934 Cdk11bP24788 784 aaKnown RBP22.55■■□□□ 1.2
Shank1-201ENSMUST00000107934 Eif5bQ05D44 1216 aaKnown RBP22.43■■□□□ 1.18
Shank1-201ENSMUST00000107934 Ppargc1bQ8VHJ7 1014 aa22.41■■□□□ 1.18
Shank1-201ENSMUST00000107934 NeflP08551 543 aa22.37■■□□□ 1.17
Shank1-201ENSMUST00000107934 Zbtb7cQ8VCZ7 619 aa22.32■■□□□ 1.16
Shank1-201ENSMUST00000107934 Npm1Q61937 292 aaKnown RBP22.31■■□□□ 1.16
Shank1-201ENSMUST00000107934 TonslQ6NZL6 1363 aa22.3■■□□□ 1.16
Shank1-201ENSMUST00000107934 Nop58Q6DFW4 536 aaKnown RBP22.28■■□□□ 1.16
Shank1-201ENSMUST00000107934 Ttbk1Q6PCN3 1308 aa22.25■■□□□ 1.15
Shank1-201ENSMUST00000107934 Tnnt3Q9QZ47 272 aa22.24■■□□□ 1.15
Shank1-201ENSMUST00000107934 Pcgf6Q99NA9 353 aa22.23■■□□□ 1.15
Shank1-201ENSMUST00000107934 Lmod2Q3UHZ5 550 aa22.22■■□□□ 1.15
Shank1-201ENSMUST00000107934 Ifnlr1Q8CGK5 535 aa22.18■■□□□ 1.14
Shank1-201ENSMUST00000107934 4933416C03RikQ3V063 378 aa22.15■■□□□ 1.14
Shank1-201ENSMUST00000107934 Gm13697A2AK42 830 aa22.13■■□□□ 1.13
Shank1-201ENSMUST00000107934 Hnrnpul2Q00PI9 745 aaKnown RBP22.13■■□□□ 1.13
Shank1-201ENSMUST00000107934 Mier1Q5UAK0 511 aa22.11■■□□□ 1.13
Shank1-201ENSMUST00000107934 Plekhg3Q4VAC9 1341 aa22.07■■□□□ 1.12
Shank1-201ENSMUST00000107934 Chic1Q8CBW7 227 aa22■■□□□ 1.11
Shank1-201ENSMUST00000107934 Supt5hO55201 1082 aaKnown RBP21.99■■□□□ 1.11
Shank1-201ENSMUST00000107934 Erich6D3Z6S9 713 aa21.95■■□□□ 1.1
Shank1-201ENSMUST00000107934 Abcc8B2RUS7 1588 aa21.93■■□□□ 1.1
Shank1-201ENSMUST00000107934 Zbtb4Q5F293 982 aa21.92■■□□□ 1.1
Shank1-201ENSMUST00000107934 Atp1b4Q99ME6 356 aa21.92■■□□□ 1.1
Shank1-201ENSMUST00000107934 4930567H17RikQ3V0K5 233 aa21.91■■□□□ 1.1
Shank1-201ENSMUST00000107934 Fkbp15Q6P9Q6 1216 aaKnown RBP21.82■■□□□ 1.08
Shank1-201ENSMUST00000107934 Nlrp6Q91WS2 869 aa21.77■■□□□ 1.08
Shank1-201ENSMUST00000107934 Prdm10Q3UTQ7 1184 aa21.75■■□□□ 1.07
Shank1-201ENSMUST00000107934 Gm13695A2AK44 830 aa21.72■■□□□ 1.07
Shank1-201ENSMUST00000107934 Brd4Q9ESU6 1400 aaKnown RBP21.71■■□□□ 1.07
Shank1-201ENSMUST00000107934 Plppr3Q7TPB0 716 aa21.68■■□□□ 1.06
Shank1-201ENSMUST00000107934 ClspnQ80YR7 1315 aa21.64■■□□□ 1.06
Shank1-201ENSMUST00000107934 Mapk8ip2Q9ERE9 830 aa21.62■■□□□ 1.05
Shank1-201ENSMUST00000107934 Polr3glQ8R0C0 218 aa21.61■■□□□ 1.05
Shank1-201ENSMUST00000107934 Clip1Q922J3 1391 aa21.61■■□□□ 1.05
Shank1-201ENSMUST00000107934 Ubl4bQ9CQ84 188 aa21.6■■□□□ 1.05
Shank1-201ENSMUST00000107934 Hdac5Q9Z2V6 1113 aa21.57■■□□□ 1.04
Shank1-201ENSMUST00000107934 Eid3Q3V124 375 aa21.57■■□□□ 1.04
Shank1-201ENSMUST00000107934 Myt1Q8CFC2 1127 aa21.55■■□□□ 1.04
Shank1-201ENSMUST00000107934 Rb1cc1Q9ESK9 1588 aa21.51■■□□□ 1.03
Shank1-201ENSMUST00000107934 Rtl5Q5DTT4 599 aa21.48■■□□□ 1.03
Shank1-201ENSMUST00000107934 Cep164Q5DU05 1446 aa21.37■■□□□ 1.01
Shank1-201ENSMUST00000107934 Anp32aO35381 247 aa21.36■■□□□ 1.01
Shank1-201ENSMUST00000107934 Chic2Q9D9G3 165 aa21.35■■□□□ 1.01
Shank1-201ENSMUST00000107934 ArxO35085 564 aa21.3■■□□□ 1
Shank1-201ENSMUST00000107934 DiexfQ8BTT6 772 aaKnown RBP21.3■■□□□ 1
Shank1-201ENSMUST00000107934 Ccer2J3QPU5 274 aa21.28■■□□□ 1
Shank1-201ENSMUST00000107934 Rangap1P46061 589 aaKnown RBP21.27■■□□□ 1
Shank1-201ENSMUST00000107934 Dcaf1Q80TR8 1506 aa21.27■■□□□ 1
Shank1-201ENSMUST00000107934 DaxxO35613 739 aa21.27■□□□□ 0.99
Shank1-201ENSMUST00000107934 Csrnp3P59055 597 aa21.26■□□□□ 0.99
Shank1-201ENSMUST00000107934 Safb2Q80YR5 991 aaKnown RBP21.24■□□□□ 0.99
Shank1-201ENSMUST00000107934 BlmO88700 1416 aa21.2■□□□□ 0.98
Shank1-201ENSMUST00000107934 Rad21Q61550 635 aaKnown RBP21.13■□□□□ 0.97
Shank1-201ENSMUST00000107934 Gm38655A0A286YDK6 273 aa21.12■□□□□ 0.97
Shank1-201ENSMUST00000107934 Sall2Q9QX96 1004 aa21.12■□□□□ 0.97
Shank1-201ENSMUST00000107934 P3h3Q8CG70 732 aa21.11■□□□□ 0.97
Shank1-201ENSMUST00000107934 Clstn2Q9ER65 966 aa21.1■□□□□ 0.97
Shank1-201ENSMUST00000107934 NacadQ5SWP3 1504 aa21.05■□□□□ 0.96
Shank1-201ENSMUST00000107934 Setd5Q5XJV7 1441 aa21.01■□□□□ 0.95
Shank1-201ENSMUST00000107934 Kif15Q6P9L6 1387 aa20.98■□□□□ 0.95
Shank1-201ENSMUST00000107934 Ercc6F8VPZ5 1481 aa20.96■□□□□ 0.95
Shank1-201ENSMUST00000107934 Upf2A2AT37 1269 aaKnown RBP20.96■□□□□ 0.95
Retrieved 100 of 22,080 RNA–protein pairs in 57 ms