RNA–Protein interactions for RNA: ENSMUST00000105994.3

Snrnp40-201, Transcript of U5 small nuclear ribonucleoprotein 40 kDa protein, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Snrnp40, Length 1,584 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Snrnp40-201ENSMUST00000105994 Srcin1Q9QWI6 1250 aa29.56■■■□□ 2.32
Snrnp40-201ENSMUST00000105994 Supt5hO55201 1082 aaKnown RBP29.55■■■□□ 2.32
Snrnp40-201ENSMUST00000105994 Usp40Q8BWR4 1235 aa29.54■■■□□ 2.32
Snrnp40-201ENSMUST00000105994 Cps1Q8C196 1500 aa29.54■■■□□ 2.32
Snrnp40-201ENSMUST00000105994 Itsn2Q9Z0R6 1659 aa29.52■■■□□ 2.32
Snrnp40-201ENSMUST00000105994 Tmem94Q7TSH8 1360 aa29.51■■■□□ 2.31
Snrnp40-201ENSMUST00000105994 Gtf2e1Q9D0D5 440 aa29.51■■■□□ 2.31
Snrnp40-201ENSMUST00000105994 Col14a1Q80X19 1797 aa29.5■■■□□ 2.31
Snrnp40-201ENSMUST00000105994 Nwd1A6H603 1563 aa29.46■■■□□ 2.31
Snrnp40-201ENSMUST00000105994 IqubQ8CDK3 788 aa29.45■■■□□ 2.31
Snrnp40-201ENSMUST00000105994 Plekhg1F6S200 1446 aa29.44■■■□□ 2.3
Snrnp40-201ENSMUST00000105994 Plekhg5Q66T02 1073 aa29.44■■■□□ 2.3
Snrnp40-201ENSMUST00000105994 Stk26Q99JT2 416 aa29.44■■■□□ 2.3
Snrnp40-201ENSMUST00000105994 Utp14aQ640M1 767 aaKnown RBP29.43■■■□□ 2.3
Snrnp40-201ENSMUST00000105994 NalcnQ8BXR5 1738 aa29.43■■■□□ 2.3
Snrnp40-201ENSMUST00000105994 Tom1O88746 492 aa29.43■■■□□ 2.3
Snrnp40-201ENSMUST00000105994 Kif20bQ80WE4 1774 aaKnown RBP29.41■■■□□ 2.3
Snrnp40-201ENSMUST00000105994 Gimap5Q8BWF2 308 aa29.4■■■□□ 2.3
Snrnp40-201ENSMUST00000105994 Pik3c2aQ61194 1686 aa29.4■■■□□ 2.3
Snrnp40-201ENSMUST00000105994 Stag3O70576 1240 aa29.38■■■□□ 2.29
Snrnp40-201ENSMUST00000105994 Atf3Q60765 181 aa29.37■■■□□ 2.29
Snrnp40-201ENSMUST00000105994 Cep170bQ80U49 1574 aa29.37■■■□□ 2.29
Snrnp40-201ENSMUST00000105994 C3P01027 1663 aa29.35■■■□□ 2.29
Snrnp40-201ENSMUST00000105994 Gm16486A0A1D5RMD1 1434 aa29.35■■■□□ 2.29
Snrnp40-201ENSMUST00000105994 Zbtb4Q5F293 982 aa29.35■■■□□ 2.29
Snrnp40-201ENSMUST00000105994 Rreb1Q3UH06 1700 aaKnown RBP29.34■■■□□ 2.29
Snrnp40-201ENSMUST00000105994 Usp32F8VPZ3 1604 aa29.32■■■□□ 2.28
Snrnp40-201ENSMUST00000105994 Sbno1Q689Z5 1390 aa29.31■■■□□ 2.28
Snrnp40-201ENSMUST00000105994 D430041D05RikF6ZGR6 1678 aa29.3■■■□□ 2.28
Snrnp40-201ENSMUST00000105994 Ttll13A4Q9F6 804 aa29.29■■■□□ 2.28
Snrnp40-201ENSMUST00000105994 Pik3c2bE9QAN8 1632 aa29.29■■■□□ 2.28
Snrnp40-201ENSMUST00000105994 CenpjQ569L8 1344 aa29.28■■■□□ 2.28
Snrnp40-201ENSMUST00000105994 Q3UJC8 639 aa29.28■■■□□ 2.28
Snrnp40-201ENSMUST00000105994 Pcgf6Q99NA9 353 aa29.28■■■□□ 2.28
Snrnp40-201ENSMUST00000105994 Abca14E9Q8F8 1683 aa29.28■■■□□ 2.28
Snrnp40-201ENSMUST00000105994 Gm10563F6WIE4 79 aa29.26■■■□□ 2.28
Snrnp40-201ENSMUST00000105994 InsrP15208 1372 aa29.24■■■□□ 2.27
Snrnp40-201ENSMUST00000105994 Sipa1l2Q80TE4 1722 aa29.22■■■□□ 2.27
Snrnp40-201ENSMUST00000105994 Mapk8ip2Q9ERE9 830 aa29.2■■■□□ 2.26
Snrnp40-201ENSMUST00000105994 C5P06684 1680 aa29.18■■■□□ 2.26
Snrnp40-201ENSMUST00000105994 KdrP35918 1367 aa29.17■■■□□ 2.26
Snrnp40-201ENSMUST00000105994 Atp2b2Q9R0K7 1198 aa29.17■■■□□ 2.26
Snrnp40-201ENSMUST00000105994 Als2Q920R0 1651 aa29.17■■■□□ 2.26
Snrnp40-201ENSMUST00000105994 Wnk3Q80XP9 1757 aa29.15■■■□□ 2.26
Snrnp40-201ENSMUST00000105994 Slc24a1Q91WD8 1130 aa29.14■■■□□ 2.26
Snrnp40-201ENSMUST00000105994 Slc5a4bQ91ZP4 660 aa29.13■■■□□ 2.25
Snrnp40-201ENSMUST00000105994 Mink1Q9JM52 1308 aa29.13■■■□□ 2.25
Snrnp40-201ENSMUST00000105994 PrxO55103 1391 aa29.13■■■□□ 2.25
Snrnp40-201ENSMUST00000105994 Qtrt2B8ZXI1 415 aa29.13■■■□□ 2.25
Snrnp40-201ENSMUST00000105994 NktrP30415 1453 aa29.12■■■□□ 2.25
Snrnp40-201ENSMUST00000105994 Nyap1Q6PFX7 833 aa29.1■■■□□ 2.25
Snrnp40-201ENSMUST00000105994 Tmf1B9EKI3 1091 aa29.09■■■□□ 2.25
Snrnp40-201ENSMUST00000105994 GapdhsQ64467 440 aa29.09■■■□□ 2.25
Snrnp40-201ENSMUST00000105994 Zfp142G5E869 1843 aa29.09■■■□□ 2.25
Snrnp40-201ENSMUST00000105994 DccP70211 1447 aa29.09■■■□□ 2.25
Snrnp40-201ENSMUST00000105994 Kif24Q6NWW5 1356 aa29.07■■■□□ 2.24
Snrnp40-201ENSMUST00000105994 Slc4a1apE9PX68 744 aa29.07■■■□□ 2.24
Snrnp40-201ENSMUST00000105994 Kcna6Q61923 529 aa29.06■■■□□ 2.24
Snrnp40-201ENSMUST00000105994 Fam184bQ0KK56 942 aa29.05■■■□□ 2.24
Snrnp40-201ENSMUST00000105994 Pank3Q8R2W9 370 aa29.05■■■□□ 2.24
Snrnp40-201ENSMUST00000105994 GnpatP98192 678 aa29.05■■■□□ 2.24
Snrnp40-201ENSMUST00000105994 Smg6P61406 1418 aaKnown RBP29.04■■■□□ 2.24
Snrnp40-201ENSMUST00000105994 Farp2Q91VS8 1065 aa29.04■■■□□ 2.24
Snrnp40-201ENSMUST00000105994 Gsto1O09131 240 aa29.03■■■□□ 2.24
Snrnp40-201ENSMUST00000105994 Cdk19Q8BWD8 501 aa29.03■■■□□ 2.24
Snrnp40-201ENSMUST00000105994 Idi1P58044 227 aa29.01■■■□□ 2.24
Snrnp40-201ENSMUST00000105994 Ddx17Q501J6 650 aaKnown RBP29.01■■■□□ 2.24
Snrnp40-201ENSMUST00000105994 Camta1A2A891 1682 aa29■■■□□ 2.23
Snrnp40-201ENSMUST00000105994 Tmem2Q5FWI3 1383 aa29■■■□□ 2.23
Snrnp40-201ENSMUST00000105994 Exosc9Q9JHI7 438 aaKnown RBP28.99■■■□□ 2.23
Snrnp40-201ENSMUST00000105994 Ybx3Q9JKB3 361 aaKnown RBP28.99■■■□□ 2.23
Snrnp40-201ENSMUST00000105994 FanciQ8K368 1330 aa28.99■■■□□ 2.23
Snrnp40-201ENSMUST00000105994 Sox12Q04890 314 aa28.97■■■□□ 2.23
Snrnp40-201ENSMUST00000105994 Inpp5dQ9ES52 1191 aa28.97■■■□□ 2.23
Snrnp40-201ENSMUST00000105994 Tnrc6bQ8BKI2 1810 aaKnown RBP28.97■■■□□ 2.23
Snrnp40-201ENSMUST00000105994 Zscan10Q3URR7 782 aa28.96■■■□□ 2.23
Snrnp40-201ENSMUST00000105994 Znf526Q8BI66 675 aa28.96■■■□□ 2.23
Snrnp40-201ENSMUST00000105994 Sirt1Q923E4 737 aa28.96■■■□□ 2.23
Snrnp40-201ENSMUST00000105994 N4bp2F8VQG7 1678 aaKnown RBP28.96■■■□□ 2.23
Snrnp40-201ENSMUST00000105994 Kif1aP33173 1695 aa28.96■■■□□ 2.23
Snrnp40-201ENSMUST00000105994 Abcc10Q8R4P9 1501 aa28.95■■■□□ 2.23
Snrnp40-201ENSMUST00000105994 Cypt2Q6P924 180 aa28.94■■■□□ 2.22
Snrnp40-201ENSMUST00000105994 Nhsl1Q8CAF4 1587 aa28.93■■■□□ 2.22
Snrnp40-201ENSMUST00000105994 Fbln2P37889 1221 aa28.92■■■□□ 2.22
Snrnp40-201ENSMUST00000105994 Adgrl1Q80TR1 1466 aa28.91■■■□□ 2.22
Snrnp40-201ENSMUST00000105994 Sema6bO54951 886 aa28.91■■■□□ 2.22
Snrnp40-201ENSMUST00000105994 Cnga1P29974 684 aa28.91■■■□□ 2.22
Snrnp40-201ENSMUST00000105994 Bcl2l12Q9D3J3 255 aa28.91■■■□□ 2.22
Snrnp40-201ENSMUST00000105994 Nrxn1Q9CS84 1514 aa28.91■■■□□ 2.22
Snrnp40-201ENSMUST00000105994 Slit2Q9R1B9 1521 aa28.91■■■□□ 2.22
Snrnp40-201ENSMUST00000105994 Marf1Q8BJ34 1730 aaKnown RBP28.91■■■□□ 2.22
Snrnp40-201ENSMUST00000105994 Cntnap1O54991 1385 aa28.89■■■□□ 2.22
Snrnp40-201ENSMUST00000105994 PtprvP70289 1705 aa28.89■■■□□ 2.22
Snrnp40-201ENSMUST00000105994 Fnbp4Q6ZQ03 1031 aa28.88■■■□□ 2.21
Snrnp40-201ENSMUST00000105994 NgefQ8CHT1 710 aa28.88■■■□□ 2.21
Snrnp40-201ENSMUST00000105994 Ap3b2Q9JME5 1082 aa28.88■■■□□ 2.21
Snrnp40-201ENSMUST00000105994 PtpruB1AUH1 1446 aa28.87■■■□□ 2.21
Snrnp40-201ENSMUST00000105994 Gprasp1Q5U4C1 1347 aa28.85■■■□□ 2.21
Snrnp40-201ENSMUST00000105994 Znf316Q6PGE4 1016 aa28.84■■■□□ 2.21
Snrnp40-201ENSMUST00000105994 Zranb1Q7M760 708 aa28.84■■■□□ 2.21
Retrieved 100 of 22,080 RNA–protein pairs in 8.8 ms