RNA–Protein interactions for RNA: ENSMUST00000087253.10

Tro-201, Transcript of Tro protein, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Tro, Length 3,224 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Tro-201ENSMUST00000087253 Ahdc1Q6PAL7 1594 aaKnown RBP13.68□□□□□ -0.22
Tro-201ENSMUST00000087253 Kif16bB1AVY7 1312 aa13.68□□□□□ -0.22
Tro-201ENSMUST00000087253 Plcd4Q8K3R3 807 aa13.68□□□□□ -0.22
Tro-201ENSMUST00000087253 Rwdd1Q9CQK7 243 aa13.68□□□□□ -0.22
Tro-201ENSMUST00000087253 Nphp4P59240 1425 aa13.68□□□□□ -0.22
Tro-201ENSMUST00000087253 Mroh3A0A1D5RM54 893 aa13.68□□□□□ -0.22
Tro-201ENSMUST00000087253 Tmf1B9EKI3 1091 aa13.66□□□□□ -0.22
Tro-201ENSMUST00000087253 EspnQ9ET47 871 aa13.66□□□□□ -0.22
Tro-201ENSMUST00000087253 ErbinQ80TH2 1402 aa13.66□□□□□ -0.22
Tro-201ENSMUST00000087253 Mink1Q9JM52 1308 aa13.65□□□□□ -0.22
Tro-201ENSMUST00000087253 CltcQ68FD5 1675 aaKnown RBP13.65□□□□□ -0.22
Tro-201ENSMUST00000087253 Speer4f1Q9D5Q6 258 aa13.65□□□□□ -0.22
Tro-201ENSMUST00000087253 PtprmP28828 1452 aa13.65□□□□□ -0.22
Tro-201ENSMUST00000087253 Trim30dE9PWL0 497 aa13.64□□□□□ -0.23
Tro-201ENSMUST00000087253 Nkx1-2P42580 305 aa13.64□□□□□ -0.23
Tro-201ENSMUST00000087253 4930567H17RikQ3V0K5 233 aa13.64□□□□□ -0.23
Tro-201ENSMUST00000087253 Dnai1Q8C0M8 701 aa13.64□□□□□ -0.23
Tro-201ENSMUST00000087253 Nlrp6Q91WS2 869 aa13.64□□□□□ -0.23
Tro-201ENSMUST00000087253 NudcO35685 332 aaKnown RBP13.63□□□□□ -0.23
Tro-201ENSMUST00000087253 Ppp2r1aQ76MZ3 589 aa13.63□□□□□ -0.23
Tro-201ENSMUST00000087253 Zc3h13E9Q784 1729 aaKnown RBP13.62□□□□□ -0.23
Tro-201ENSMUST00000087253 Mbd3Q9Z2D8 285 aaKnown RBP13.62□□□□□ -0.23
Tro-201ENSMUST00000087253 Sall3Q62255 1320 aa13.62□□□□□ -0.23
Tro-201ENSMUST00000087253 Skint5A7XUY5 1461 aa13.62□□□□□ -0.23
Tro-201ENSMUST00000087253 Med14A2ABV5 1459 aaKnown RBP13.62□□□□□ -0.23
Tro-201ENSMUST00000087253 Arhgef28P97433 1693 aa13.61□□□□□ -0.23
Tro-201ENSMUST00000087253 PplQ9R269 1755 aa13.6□□□□□ -0.23
Tro-201ENSMUST00000087253 TnikP83510 1323 aa13.6□□□□□ -0.23
Tro-201ENSMUST00000087253 Srcin1Q9QWI6 1250 aa13.6□□□□□ -0.23
Tro-201ENSMUST00000087253 Chd2E9PZM4 1827 aaKnown RBP13.6□□□□□ -0.23
Tro-201ENSMUST00000087253 Eif2ak4Q9QZ05 1648 aa13.6□□□□□ -0.23
Tro-201ENSMUST00000087253 Gm16486A0A1D5RMD1 1434 aa13.59□□□□□ -0.23
Tro-201ENSMUST00000087253 Hfm1D3Z4R1 1434 aa13.59□□□□□ -0.23
Tro-201ENSMUST00000087253 Eif2s2Q99L45 331 aaKnown RBP13.59□□□□□ -0.23
Tro-201ENSMUST00000087253 Dcaf11Q91VU6 549 aa13.58□□□□□ -0.23
Tro-201ENSMUST00000087253 Arid4bA2CG63 1314 aaKnown RBP13.58□□□□□ -0.24
Tro-201ENSMUST00000087253 Kdm2bQ6P1G2 1309 aa13.58□□□□□ -0.24
Tro-201ENSMUST00000087253 Armcx1Q9CX83 456 aa13.58□□□□□ -0.24
Tro-201ENSMUST00000087253 NpatQ8BMA5 1420 aa13.57□□□□□ -0.24
Tro-201ENSMUST00000087253 AU022751B1B0V2 589 aa13.57□□□□□ -0.24
Tro-201ENSMUST00000087253 Hsp90ab1P11499 724 aaKnown RBP13.57□□□□□ -0.24
Tro-201ENSMUST00000087253 Polr3glQ8R0C0 218 aa13.57□□□□□ -0.24
Tro-201ENSMUST00000087253 Fam184bQ0KK56 942 aa13.57□□□□□ -0.24
Tro-201ENSMUST00000087253 Ppm1gQ61074 542 aa13.57□□□□□ -0.24
Tro-201ENSMUST00000087253 Tspyl2Q7TQI8 677 aa13.56□□□□□ -0.24
Tro-201ENSMUST00000087253 Tex14Q7M6U3 1450 aa13.56□□□□□ -0.24
Tro-201ENSMUST00000087253 Ccdc30Q8BVF4 654 aa13.56□□□□□ -0.24
Tro-201ENSMUST00000087253 Plekhh1Q80TI1 1356 aa13.55□□□□□ -0.24
Tro-201ENSMUST00000087253 Ak7Q9D2H2 614 aa13.55□□□□□ -0.24
Tro-201ENSMUST00000087253 Mre11Q61216 706 aa13.54□□□□□ -0.24
Tro-201ENSMUST00000087253 Gemin5Q8BX17 1502 aaKnown RBP13.54□□□□□ -0.24
Tro-201ENSMUST00000087253 PalldQ9ET54 1408 aa13.54□□□□□ -0.24
Tro-201ENSMUST00000087253 Stard8Q8K031 1019 aa13.54□□□□□ -0.24
Tro-201ENSMUST00000087253 Rab3gap2Q8BMG7 1366 aa13.53□□□□□ -0.24
Tro-201ENSMUST00000087253 Cnga1P29974 684 aa13.53□□□□□ -0.24
Tro-201ENSMUST00000087253 Trim26Q99PN3 545 aa13.53□□□□□ -0.24
Tro-201ENSMUST00000087253 Kif7B7ZNG0 1348 aa13.53□□□□□ -0.24
Tro-201ENSMUST00000087253 Lrrc7Q80TE7 1490 aa13.53□□□□□ -0.24
Tro-201ENSMUST00000087253 Gm20521D3Z5F7 333 aa13.52□□□□□ -0.24
Tro-201ENSMUST00000087253 Smc5Q8CG46 1101 aaKnown RBP13.52□□□□□ -0.24
Tro-201ENSMUST00000087253 KdrP35918 1367 aa13.52□□□□□ -0.24
Tro-201ENSMUST00000087253 Pank1Q8K4K6 548 aa13.52□□□□□ -0.24
Tro-201ENSMUST00000087253 Ipo8Q7TMY7 1010 aa13.51□□□□□ -0.25
Tro-201ENSMUST00000087253 Gas2l2Q5SSG4 860 aa13.51□□□□□ -0.25
Tro-201ENSMUST00000087253 Golga2Q921M4 999 aa13.51□□□□□ -0.25
Tro-201ENSMUST00000087253 Gprasp1Q5U4C1 1347 aa13.5□□□□□ -0.25
Tro-201ENSMUST00000087253 Naip7Q9JIB3 1402 aa13.49□□□□□ -0.25
Tro-201ENSMUST00000087253 Gm6268A2A3U9 297 aa13.49□□□□□ -0.25
Tro-201ENSMUST00000087253 Nwd1A6H603 1563 aa13.49□□□□□ -0.25
Tro-201ENSMUST00000087253 Spryd3E9Q9B3 442 aa13.49□□□□□ -0.25
Tro-201ENSMUST00000087253 Rsph4aQ8BYM7 716 aa13.49□□□□□ -0.25
Tro-201ENSMUST00000087253 Stk24Q99KH8 431 aa13.49□□□□□ -0.25
Tro-201ENSMUST00000087253 Prrc2bQ7TPM1 1486 aaKnown RBP13.49□□□□□ -0.25
Tro-201ENSMUST00000087253 Dip2bQ3UH60 1574 aa13.49□□□□□ -0.25
Tro-201ENSMUST00000087253 Dip2aQ8BWT5 1523 aa13.49□□□□□ -0.25
Tro-201ENSMUST00000087253 Mapk8ip3Q9ESN9 1337 aa13.48□□□□□ -0.25
Tro-201ENSMUST00000087253 Abca14E9Q8F8 1683 aa13.48□□□□□ -0.25
Tro-201ENSMUST00000087253 NktrP30415 1453 aa13.48□□□□□ -0.25
Tro-201ENSMUST00000087253 Slc52a2Q9D8F3 450 aa13.48□□□□□ -0.25
Tro-201ENSMUST00000087253 Nrxn1Q9CS84 1514 aa13.48□□□□□ -0.25
Tro-201ENSMUST00000087253 Rangap1P46061 589 aaKnown RBP13.47□□□□□ -0.25
Tro-201ENSMUST00000087253 Ccdc183A2AJB1 534 aa13.46□□□□□ -0.25
Tro-201ENSMUST00000087253 Fan1Q69ZT1 1020 aa13.46□□□□□ -0.25
Tro-201ENSMUST00000087253 Gtf2e1Q9D0D5 440 aa13.46□□□□□ -0.26
Tro-201ENSMUST00000087253 Arap3Q8R5G7 1538 aa13.46□□□□□ -0.26
Tro-201ENSMUST00000087253 Adgrl1Q80TR1 1466 aa13.45□□□□□ -0.26
Tro-201ENSMUST00000087253 Ercc6l2Q9JIM3 1537 aa13.45□□□□□ -0.26
Tro-201ENSMUST00000087253 Ttc41Q692V3 1318 aa13.44□□□□□ -0.26
Tro-201ENSMUST00000087253 Plekhg1F6S200 1446 aa13.44□□□□□ -0.26
Tro-201ENSMUST00000087253 InsrP15208 1372 aa13.44□□□□□ -0.26
Tro-201ENSMUST00000087253 Srpk2O54781 681 aaKnown RBP13.44□□□□□ -0.26
Tro-201ENSMUST00000087253 Ppp1r18Q8BQ30 594 aa13.44□□□□□ -0.26
Tro-201ENSMUST00000087253 Atxn3Q9CVD2 355 aa13.43□□□□□ -0.26
Tro-201ENSMUST00000087253 KarsQ99MN1 595 aaKnown RBP13.43□□□□□ -0.26
Tro-201ENSMUST00000087253 Slit3Q9WVB4 1523 aa13.43□□□□□ -0.26
Tro-201ENSMUST00000087253 Cep170bQ80U49 1574 aa13.43□□□□□ -0.26
Tro-201ENSMUST00000087253 Lmtk3Q5XJV6 1424 aa13.43□□□□□ -0.26
Tro-201ENSMUST00000087253 Usp40Q8BWR4 1235 aa13.43□□□□□ -0.26
Tro-201ENSMUST00000087253 Atf7ipQ7TT18 1306 aa13.41□□□□□ -0.26
Tro-201ENSMUST00000087253 Usp19Q3UJD6 1360 aa13.41□□□□□ -0.26
Retrieved 100 of 22,080 RNA–protein pairs in 62.4 ms