RNA–Protein interactions for RNA: ENSMUST00000087253.10

Tro-201, Transcript of Tro protein, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Tro, Length 3,224 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Tro-201ENSMUST00000087253 Gm35339A0A140LHH9 1649 aa20.96■□□□□ 0.95
Tro-201ENSMUST00000087253 NischQ80TM9 1593 aa20.64■□□□□ 0.9
Tro-201ENSMUST00000087253 Abcc9P70170 1546 aa20.2■□□□□ 0.82
Tro-201ENSMUST00000087253 Abcc8B2RUS7 1588 aa19.84■□□□□ 0.77
Tro-201ENSMUST00000087253 ScribQ80U72 1612 aa18.73■□□□□ 0.59
Tro-201ENSMUST00000087253 Dcaf1Q80TR8 1506 aa18.63■□□□□ 0.57
Tro-201ENSMUST00000087253 Rhox8Q6VSS7 320 aa18.45■□□□□ 0.54
Tro-201ENSMUST00000087253 Rtl1Q7M732 1744 aa18.37■□□□□ 0.53
Tro-201ENSMUST00000087253 Ccdc180J3QNE4 1664 aa18.33■□□□□ 0.53
Tro-201ENSMUST00000087253 Kdm5dQ62240 1548 aa18.18■□□□□ 0.5
Tro-201ENSMUST00000087253 NacadQ5SWP3 1504 aa18.08■□□□□ 0.48
Tro-201ENSMUST00000087253 Rb1cc1Q9ESK9 1588 aa18.06■□□□□ 0.48
Tro-201ENSMUST00000087253 Baz1aO88379 1555 aa17.92■□□□□ 0.46
Tro-201ENSMUST00000087253 Crybg2B7ZCC2 1516 aa17.84■□□□□ 0.45
Tro-201ENSMUST00000087253 Zcchc6Q5BLK4 1491 aaKnown RBP17.78■□□□□ 0.44
Tro-201ENSMUST00000087253 Sycp2Q9CUU3 1500 aa17.74■□□□□ 0.43
Tro-201ENSMUST00000087253 Smarca2Q6DIC0 1577 aa17.55■□□□□ 0.4
Tro-201ENSMUST00000087253 Rpgrip1Q9EPQ2 1331 aa17.5■□□□□ 0.39
Tro-201ENSMUST00000087253 BicraF8VPZ9 1578 aa17.44■□□□□ 0.38
Tro-201ENSMUST00000087253 Ehmt2Q9Z148 1263 aaKnown RBP17.39■□□□□ 0.37
Tro-201ENSMUST00000087253 Acin1Q9JIX8 1338 aaKnown RBP17.21■□□□□ 0.35
Tro-201ENSMUST00000087253 Ccdc136Q3TVA9 1136 aa17.08■□□□□ 0.32
Tro-201ENSMUST00000087253 Cecr2E9Q2Z1 1453 aa16.99■□□□□ 0.31
Tro-201ENSMUST00000087253 HrcG5E8J6 738 aa16.92■□□□□ 0.3
Tro-201ENSMUST00000087253 Smarca4Q3TKT4 1613 aaKnown RBP16.87■□□□□ 0.29
Tro-201ENSMUST00000087253 Synj1Q8CHC4 1574 aa16.86■□□□□ 0.29
Tro-201ENSMUST00000087253 Brd4Q9ESU6 1400 aaKnown RBP16.84■□□□□ 0.29
Tro-201ENSMUST00000087253 Cttnbp2B9EJA2 1648 aa16.83■□□□□ 0.28
Tro-201ENSMUST00000087253 Pcgf6Q99NA9 353 aa16.8■□□□□ 0.28
Tro-201ENSMUST00000087253 CftrP26361 1476 aa16.77■□□□□ 0.28
Tro-201ENSMUST00000087253 Trim41Q5NCC3 630 aa16.74■□□□□ 0.27
Tro-201ENSMUST00000087253 Top2bQ64511 1612 aa16.72■□□□□ 0.27
Tro-201ENSMUST00000087253 Iqgap2Q3UQ44 1575 aa16.64■□□□□ 0.25
Tro-201ENSMUST00000087253 Atad2bE9Q166 1460 aaKnown RBP16.61■□□□□ 0.25
Tro-201ENSMUST00000087253 Golga3P55937 1487 aa16.58■□□□□ 0.25
Tro-201ENSMUST00000087253 Pds5bQ4VA53 1446 aaKnown RBP16.54■□□□□ 0.24
Tro-201ENSMUST00000087253 Supt5hO55201 1082 aaKnown RBP16.49■□□□□ 0.23
Tro-201ENSMUST00000087253 Cep164Q5DU05 1446 aa16.49■□□□□ 0.23
Tro-201ENSMUST00000087253 Wdr62Q3U3T8 1523 aa16.42■□□□□ 0.22
Tro-201ENSMUST00000087253 Cc2d2aQ8CFW7 1633 aa16.39■□□□□ 0.21
Tro-201ENSMUST00000087253 Unc13aQ4KUS2 1712 aa16.39■□□□□ 0.21
Tro-201ENSMUST00000087253 TnnQ80Z71 1560 aa16.38■□□□□ 0.21
Tro-201ENSMUST00000087253 Rsf1E9PWW9 1441 aaKnown RBP16.38■□□□□ 0.21
Tro-201ENSMUST00000087253 Thoc2B1AZI6 1594 aaKnown RBP16.35■□□□□ 0.21
Tro-201ENSMUST00000087253 Gab3Q8BSM5 595 aa16.35■□□□□ 0.21
Tro-201ENSMUST00000087253 Frmpd1A2AKB4 1549 aa16.34■□□□□ 0.21
Tro-201ENSMUST00000087253 Ccdc88bQ4QRL3 1481 aa16.33■□□□□ 0.2
Tro-201ENSMUST00000087253 Zeb1Q64318 1117 aa16.31■□□□□ 0.2
Tro-201ENSMUST00000087253 Cngb1E1AZ71 1325 aa16.29■□□□□ 0.2
Tro-201ENSMUST00000087253 Fmn1Q05860 1466 aa16.27■□□□□ 0.19
Tro-201ENSMUST00000087253 Top2aQ01320 1528 aaKnown RBP16.23■□□□□ 0.19
Tro-201ENSMUST00000087253 Lamc3Q9R0B6 1581 aa16.21■□□□□ 0.19
Tro-201ENSMUST00000087253 Chic1Q8CBW7 227 aa16.18■□□□□ 0.18
Tro-201ENSMUST00000087253 Neurod1Q60867 357 aa16.17■□□□□ 0.18
Tro-201ENSMUST00000087253 Ercc6F8VPZ5 1481 aa16.14■□□□□ 0.17
Tro-201ENSMUST00000087253 Fam135aQ6NS59 1506 aa16.1■□□□□ 0.17
Tro-201ENSMUST00000087253 Eif4g1Q6NZJ6 1600 aaKnown RBP16.09■□□□□ 0.17
Tro-201ENSMUST00000087253 Mier1Q5UAK0 511 aa16.06■□□□□ 0.16
Tro-201ENSMUST00000087253 Rapgef2Q8CHG7 1496 aa16.04■□□□□ 0.16
Tro-201ENSMUST00000087253 NefmP08553 848 aa16.01■□□□□ 0.15
Tro-201ENSMUST00000087253 Baz1bQ9Z277 1479 aa15.98■□□□□ 0.15
Tro-201ENSMUST00000087253 Esf1Q3V1V3 845 aaKnown RBP15.96■□□□□ 0.15
Tro-201ENSMUST00000087253 Sall2Q9QX96 1004 aa15.96■□□□□ 0.15
Tro-201ENSMUST00000087253 Camsap1A2AHC3 1581 aa15.95■□□□□ 0.14
Tro-201ENSMUST00000087253 Phldb1Q6PDH0 1371 aaKnown RBP15.91■□□□□ 0.14
Tro-201ENSMUST00000087253 NrkQ9R0G8 1455 aa15.86■□□□□ 0.13
Tro-201ENSMUST00000087253 UbtfP25976 765 aaKnown RBP15.85■□□□□ 0.13
Tro-201ENSMUST00000087253 Wdr66E9Q743 1299 aa15.84■□□□□ 0.13
Tro-201ENSMUST00000087253 Las1lA2BE28 776 aaKnown RBP15.81■□□□□ 0.12
Tro-201ENSMUST00000087253 Cep162Q6ZQ06 1403 aa15.77■□□□□ 0.11
Tro-201ENSMUST00000087253 Grin2bQ01097 1482 aa15.76■□□□□ 0.11
Tro-201ENSMUST00000087253 Kif15Q6P9L6 1387 aa15.76■□□□□ 0.11
Tro-201ENSMUST00000087253 Ppargc1bQ8VHJ7 1014 aa15.75■□□□□ 0.11
Tro-201ENSMUST00000087253 Shroom4Q1W617 1475 aa15.74■□□□□ 0.11
Tro-201ENSMUST00000087253 PtprkP35822 1457 aa15.71■□□□□ 0.11
Tro-201ENSMUST00000087253 Map3k1P53349 1493 aa15.71■□□□□ 0.11
Tro-201ENSMUST00000087253 Aebp2Q9Z248 504 aaKnown RBP15.7■□□□□ 0.1
Tro-201ENSMUST00000087253 Arhgap35Q91YM2 1499 aa15.69■□□□□ 0.1
Tro-201ENSMUST00000087253 Csrnp3P59055 597 aa15.69■□□□□ 0.1
Tro-201ENSMUST00000087253 Ccdc18Q640L5 1455 aa15.67■□□□□ 0.1
Tro-201ENSMUST00000087253 Myt1lP97500 1187 aa15.67■□□□□ 0.1
Tro-201ENSMUST00000087253 Anks4bQ8K3X6 423 aa15.64■□□□□ 0.09
Tro-201ENSMUST00000087253 1700123L14RikQ3V2K7 440 aa15.63■□□□□ 0.09
Tro-201ENSMUST00000087253 Cux2P70298 1426 aa15.63■□□□□ 0.09
Tro-201ENSMUST00000087253 Gpatch8A2A6A1 1505 aa15.63■□□□□ 0.09
Tro-201ENSMUST00000087253 AqrQ8CFQ3 1481 aaKnown RBP15.62■□□□□ 0.09
Tro-201ENSMUST00000087253 Erich3F6QRE9 1637 aa15.59■□□□□ 0.09
Tro-201ENSMUST00000087253 Mroh2bQ7M6Y6 1581 aa15.58■□□□□ 0.08
Tro-201ENSMUST00000087253 PogzQ8BZH4 1409 aaKnown RBP15.57■□□□□ 0.08
Tro-201ENSMUST00000087253 Cdk11bP24788 784 aaKnown RBP15.56■□□□□ 0.08
Tro-201ENSMUST00000087253 Efcab5A0JP43 1406 aa15.56■□□□□ 0.08
Tro-201ENSMUST00000087253 Nop58Q6DFW4 536 aaKnown RBP15.55■□□□□ 0.08
Tro-201ENSMUST00000087253 Kif21aQ9QXL2 1672 aa15.55■□□□□ 0.08
Tro-201ENSMUST00000087253 Mrc2Q64449 1479 aa15.53■□□□□ 0.08
Tro-201ENSMUST00000087253 LrpprcQ6PB66 1392 aaKnown RBP15.51■□□□□ 0.07
Tro-201ENSMUST00000087253 ClspnQ80YR7 1315 aa15.5■□□□□ 0.07
Tro-201ENSMUST00000087253 Samd9lQ69Z37 1561 aa15.5■□□□□ 0.07
Tro-201ENSMUST00000087253 Duox2A2AQ99 1517 aa15.49■□□□□ 0.07
Tro-201ENSMUST00000087253 Ubl4bQ9CQ84 188 aa15.48■□□□□ 0.07
Tro-201ENSMUST00000087253 Npm2Q80W85 207 aa15.47■□□□□ 0.07
Retrieved 100 of 22,080 RNA–protein pairs in 80 ms