RNA–Protein interactions for RNA: ENSMUST00000078680.12

Ush1c-202, Transcript of Harmonin, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Ush1c, Length 2,047 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ush1c-202ENSMUST00000078680 Lrrc7Q80TE7 1490 aa20.26■□□□□ 0.83
Ush1c-202ENSMUST00000078680 Usp40Q8BWR4 1235 aa20.25■□□□□ 0.83
Ush1c-202ENSMUST00000078680 Utp14aQ640M1 767 aaKnown RBP20.24■□□□□ 0.83
Ush1c-202ENSMUST00000078680 Plekhg5Q66T02 1073 aa20.24■□□□□ 0.83
Ush1c-202ENSMUST00000078680 HnrnpmQ9D0E1 729 aaKnown RBP20.23■□□□□ 0.83
Ush1c-202ENSMUST00000078680 Supt16hQ920B9 1047 aa20.21■□□□□ 0.83
Ush1c-202ENSMUST00000078680 Arap3Q8R5G7 1538 aa20.2■□□□□ 0.82
Ush1c-202ENSMUST00000078680 Thsd7aQ69ZU6 1645 aa20.2■□□□□ 0.82
Ush1c-202ENSMUST00000078680 IqubQ8CDK3 788 aa20.19■□□□□ 0.82
Ush1c-202ENSMUST00000078680 Tubgcp6G5E8P0 1769 aa20.18■□□□□ 0.82
Ush1c-202ENSMUST00000078680 Nphp4P59240 1425 aa20.18■□□□□ 0.82
Ush1c-202ENSMUST00000078680 Cep170bQ80U49 1574 aa20.18■□□□□ 0.82
Ush1c-202ENSMUST00000078680 Stag3O70576 1240 aa20.17■□□□□ 0.82
Ush1c-202ENSMUST00000078680 Zbtb4Q5F293 982 aa20.17■□□□□ 0.82
Ush1c-202ENSMUST00000078680 Gtf2e1Q9D0D5 440 aa20.17■□□□□ 0.82
Ush1c-202ENSMUST00000078680 Srcin1Q9QWI6 1250 aa20.17■□□□□ 0.82
Ush1c-202ENSMUST00000078680 Stard8Q8K031 1019 aa20.16■□□□□ 0.82
Ush1c-202ENSMUST00000078680 Sipa1l1Q8C0T5 1782 aa20.16■□□□□ 0.82
Ush1c-202ENSMUST00000078680 Cps1Q8C196 1500 aa20.15■□□□□ 0.82
Ush1c-202ENSMUST00000078680 Gli3Q61602 1583 aa20.15■□□□□ 0.82
Ush1c-202ENSMUST00000078680 Tns3Q5SSZ5 1440 aa20.15■□□□□ 0.82
Ush1c-202ENSMUST00000078680 DnmbpQ6TXD4 1580 aa20.14■□□□□ 0.82
Ush1c-202ENSMUST00000078680 Plekhg1F6S200 1446 aa20.14■□□□□ 0.81
Ush1c-202ENSMUST00000078680 Wdr43Q6ZQL4 677 aaKnown RBP20.14■□□□□ 0.81
Ush1c-202ENSMUST00000078680 Tmem94Q7TSH8 1360 aa20.1■□□□□ 0.81
Ush1c-202ENSMUST00000078680 Ift172Q6VH22 1749 aa20.08■□□□□ 0.81
Ush1c-202ENSMUST00000078680 Amigo3Q8C2S7 508 aa20.08■□□□□ 0.8
Ush1c-202ENSMUST00000078680 Atp2b2Q9R0K7 1198 aa20.08■□□□□ 0.8
Ush1c-202ENSMUST00000078680 Slain2Q8CI08 581 aa20.07■□□□□ 0.8
Ush1c-202ENSMUST00000078680 Mink1Q9JM52 1308 aa20.07■□□□□ 0.8
Ush1c-202ENSMUST00000078680 Q3UJC8 639 aa20.05■□□□□ 0.8
Ush1c-202ENSMUST00000078680 Ppp4r2Q0VGB7 417 aa20.05■□□□□ 0.8
Ush1c-202ENSMUST00000078680 Col18a1P39061 1774 aa20.04■□□□□ 0.8
Ush1c-202ENSMUST00000078680 Pola1P33609 1465 aa20.03■□□□□ 0.8
Ush1c-202ENSMUST00000078680 Evi5lH3BKQ3 813 aa20.02■□□□□ 0.8
Ush1c-202ENSMUST00000078680 Usp32F8VPZ3 1604 aa20.02■□□□□ 0.8
Ush1c-202ENSMUST00000078680 Nwd1A6H603 1563 aa20.02■□□□□ 0.79
Ush1c-202ENSMUST00000078680 CenpjQ569L8 1344 aa20.01■□□□□ 0.79
Ush1c-202ENSMUST00000078680 Abca14E9Q8F8 1683 aa20.01■□□□□ 0.79
Ush1c-202ENSMUST00000078680 Gm16486A0A1D5RMD1 1434 aa20■□□□□ 0.79
Ush1c-202ENSMUST00000078680 Itsn2Q9Z0R6 1659 aa20■□□□□ 0.79
Ush1c-202ENSMUST00000078680 Gm10563F6WIE4 79 aa20■□□□□ 0.79
Ush1c-202ENSMUST00000078680 Slc24a1Q91WD8 1130 aa19.98■□□□□ 0.79
Ush1c-202ENSMUST00000078680 Unc13bQ9Z1N9 1602 aa19.98■□□□□ 0.79
Ush1c-202ENSMUST00000078680 Mrs2Q5NCE8 434 aa19.97■□□□□ 0.79
Ush1c-202ENSMUST00000078680 Rreb1Q3UH06 1700 aaKnown RBP19.97■□□□□ 0.79
Ush1c-202ENSMUST00000078680 Col14a1Q80X19 1797 aa19.97■□□□□ 0.79
Ush1c-202ENSMUST00000078680 Cdk19Q8BWD8 501 aa19.97■□□□□ 0.79
Ush1c-202ENSMUST00000078680 Slc4a2P13808 1237 aaKnown RBP19.95■□□□□ 0.78
Ush1c-202ENSMUST00000078680 Brinp3Q499E0 766 aa19.95■□□□□ 0.78
Ush1c-202ENSMUST00000078680 Sbno1Q689Z5 1390 aa19.94■□□□□ 0.78
Ush1c-202ENSMUST00000078680 NktrP30415 1453 aa19.94■□□□□ 0.78
Ush1c-202ENSMUST00000078680 NalcnQ8BXR5 1738 aa19.94■□□□□ 0.78
Ush1c-202ENSMUST00000078680 Kif20bQ80WE4 1774 aaKnown RBP19.94■□□□□ 0.78
Ush1c-202ENSMUST00000078680 Pik3c2bE9QAN8 1632 aa19.94■□□□□ 0.78
Ush1c-202ENSMUST00000078680 Zranb1Q7M760 708 aa19.93■□□□□ 0.78
Ush1c-202ENSMUST00000078680 C3P01027 1663 aa19.93■□□□□ 0.78
Ush1c-202ENSMUST00000078680 D430041D05RikF6ZGR6 1678 aa19.92■□□□□ 0.78
Ush1c-202ENSMUST00000078680 Gsto1O09131 240 aa19.91■□□□□ 0.78
Ush1c-202ENSMUST00000078680 Liat1Q810M6 228 aa19.91■□□□□ 0.78
Ush1c-202ENSMUST00000078680 NrdcQ8BHG1 1161 aa19.91■□□□□ 0.78
Ush1c-202ENSMUST00000078680 InsrP15208 1372 aa19.9■□□□□ 0.78
Ush1c-202ENSMUST00000078680 PnisrA2AJT4 805 aaKnown RBP19.9■□□□□ 0.78
Ush1c-202ENSMUST00000078680 Anp32bQ9EST5 272 aaKnown RBP19.9■□□□□ 0.78
Ush1c-202ENSMUST00000078680 Hspa1lP16627 641 aa19.9■□□□□ 0.78
Ush1c-202ENSMUST00000078680 Eif5bQ05D44 1216 aaKnown RBP19.9■□□□□ 0.78
Ush1c-202ENSMUST00000078680 Atf3Q60765 181 aa19.9■□□□□ 0.78
Ush1c-202ENSMUST00000078680 Idi1P58044 227 aa19.88■□□□□ 0.77
Ush1c-202ENSMUST00000078680 Sirt1Q923E4 737 aa19.88■□□□□ 0.77
Ush1c-202ENSMUST00000078680 Tmf1B9EKI3 1091 aa19.88■□□□□ 0.77
Ush1c-202ENSMUST00000078680 Exoc6Q8R313 802 aa19.88■□□□□ 0.77
Ush1c-202ENSMUST00000078680 Znf316Q6PGE4 1016 aa19.87■□□□□ 0.77
Ush1c-202ENSMUST00000078680 Bcl11bQ99PV8 884 aa19.87■□□□□ 0.77
Ush1c-202ENSMUST00000078680 Exosc9Q9JHI7 438 aaKnown RBP19.87■□□□□ 0.77
Ush1c-202ENSMUST00000078680 C5P06684 1680 aa19.87■□□□□ 0.77
Ush1c-202ENSMUST00000078680 Als2Q920R0 1651 aa19.87■□□□□ 0.77
Ush1c-202ENSMUST00000078680 Cnga1P29974 684 aa19.85■□□□□ 0.77
Ush1c-202ENSMUST00000078680 PrxO55103 1391 aa19.85■□□□□ 0.77
Ush1c-202ENSMUST00000078680 Sox12Q04890 314 aa19.85■□□□□ 0.77
Ush1c-202ENSMUST00000078680 Wwc2Q6NXJ0 1187 aa19.85■□□□□ 0.77
Ush1c-202ENSMUST00000078680 Sipa1l2Q80TE4 1722 aa19.84■□□□□ 0.77
Ush1c-202ENSMUST00000078680 Pank3Q8R2W9 370 aa19.83■□□□□ 0.76
Ush1c-202ENSMUST00000078680 NgefQ8CHT1 710 aa19.82■□□□□ 0.76
Ush1c-202ENSMUST00000078680 FanciQ8K368 1330 aa19.82■□□□□ 0.76
Ush1c-202ENSMUST00000078680 Egfem1Q8C088 590 aa19.81■□□□□ 0.76
Ush1c-202ENSMUST00000078680 Iqsec2Q5DU25 1478 aa19.81■□□□□ 0.76
Ush1c-202ENSMUST00000078680 Pak3Q61036 559 aa19.81■□□□□ 0.76
Ush1c-202ENSMUST00000078680 Slc4a1apE9PX68 744 aa19.8■□□□□ 0.76
Ush1c-202ENSMUST00000078680 Ccdc27Q3V036 639 aa19.8■□□□□ 0.76
Ush1c-202ENSMUST00000078680 Idi2Q8BFZ6 227 aa19.8■□□□□ 0.76
Ush1c-202ENSMUST00000078680 Map3k19E9Q3S4 1311 aa19.79■□□□□ 0.76
Ush1c-202ENSMUST00000078680 Abcc10Q8R4P9 1501 aa19.79■□□□□ 0.76
Ush1c-202ENSMUST00000078680 Tmem2Q5FWI3 1383 aa19.79■□□□□ 0.76
Ush1c-202ENSMUST00000078680 Fam184bQ0KK56 942 aa19.78■□□□□ 0.76
Ush1c-202ENSMUST00000078680 Zscan10Q3URR7 782 aa19.78■□□□□ 0.76
Ush1c-202ENSMUST00000078680 Kcna6Q61923 529 aa19.78■□□□□ 0.76
Ush1c-202ENSMUST00000078680 Ap3b2Q9JME5 1082 aa19.78■□□□□ 0.76
Ush1c-202ENSMUST00000078680 PtpruB1AUH1 1446 aa19.77■□□□□ 0.76
Ush1c-202ENSMUST00000078680 Farp2Q91VS8 1065 aa19.76■□□□□ 0.75
Ush1c-202ENSMUST00000078680 GnpatP98192 678 aa19.76■□□□□ 0.75
Retrieved 100 of 22,080 RNA–protein pairs in 29.9 ms