RNA–Protein interactions for RNA: ENSMUST00000069187.11

Trim23-203, Transcript of E3 ubiquitin-protein ligase TRIM23, mousemouse

TSL 1 (best) BASIC

Gene Trim23, Length 3,546 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim23-203ENSMUST00000069187 Prrc2bQ7TPM1 1486 aaKnown RBP14.86□□□□□ -0.03
Trim23-203ENSMUST00000069187 Zscan21Q07231 555 aa14.86□□□□□ -0.03
Trim23-203ENSMUST00000069187 Pdcl3Q8BVF2 240 aa14.85□□□□□ -0.03
Trim23-203ENSMUST00000069187 Dnai1Q8C0M8 701 aa14.85□□□□□ -0.03
Trim23-203ENSMUST00000069187 Q9D9H8 365 aa14.85□□□□□ -0.03
Trim23-203ENSMUST00000069187 Ppm1gQ61074 542 aa14.84□□□□□ -0.03
Trim23-203ENSMUST00000069187 Abca8aQ8K442 1620 aa14.84□□□□□ -0.03
Trim23-203ENSMUST00000069187 AU022751B1B0V2 589 aa14.84□□□□□ -0.03
Trim23-203ENSMUST00000069187 Sart3Q9JLI8 962 aaKnown RBP14.84□□□□□ -0.03
Trim23-203ENSMUST00000069187 Arid4bA2CG63 1314 aaKnown RBP14.83□□□□□ -0.03
Trim23-203ENSMUST00000069187 Ahdc1Q6PAL7 1594 aaKnown RBP14.83□□□□□ -0.04
Trim23-203ENSMUST00000069187 Ino80Q6ZPV2 1559 aa14.83□□□□□ -0.04
Trim23-203ENSMUST00000069187 Tmf1B9EKI3 1091 aa14.83□□□□□ -0.04
Trim23-203ENSMUST00000069187 Prdm10Q3UTQ7 1184 aa14.83□□□□□ -0.04
Trim23-203ENSMUST00000069187 Utp14aQ640M1 767 aaKnown RBP14.83□□□□□ -0.04
Trim23-203ENSMUST00000069187 Slc4a1apE9PX68 744 aa14.82□□□□□ -0.04
Trim23-203ENSMUST00000069187 Myo3aQ8K3H5 1613 aa14.81□□□□□ -0.04
Trim23-203ENSMUST00000069187 Rims1Q99NE5 1463 aa14.81□□□□□ -0.04
Trim23-203ENSMUST00000069187 Pank3Q8R2W9 370 aa14.81□□□□□ -0.04
Trim23-203ENSMUST00000069187 EspnQ9ET47 871 aa14.81□□□□□ -0.04
Trim23-203ENSMUST00000069187 NudcO35685 332 aaKnown RBP14.8□□□□□ -0.04
Trim23-203ENSMUST00000069187 Kcnn1Q9EQR3 537 aa14.8□□□□□ -0.04
Trim23-203ENSMUST00000069187 Ehbp1l1Q99MS7 1716 aa14.8□□□□□ -0.04
Trim23-203ENSMUST00000069187 Cnga1P29974 684 aa14.8□□□□□ -0.04
Trim23-203ENSMUST00000069187 Cep152A2AUM9 1736 aaKnown RBP14.79□□□□□ -0.04
Trim23-203ENSMUST00000069187 Rpgrip1lQ8CG73 1264 aa14.79□□□□□ -0.04
Trim23-203ENSMUST00000069187 CenpjQ569L8 1344 aa14.79□□□□□ -0.04
Trim23-203ENSMUST00000069187 Kdm2bQ6P1G2 1309 aa14.79□□□□□ -0.04
Trim23-203ENSMUST00000069187 Uggt1Q6P5E4 1551 aa14.78□□□□□ -0.04
Trim23-203ENSMUST00000069187 Exosc9Q9JHI7 438 aaKnown RBP14.78□□□□□ -0.04
Trim23-203ENSMUST00000069187 Gtf2a1Q99PM3 378 aa14.78□□□□□ -0.04
Trim23-203ENSMUST00000069187 Inpp5dQ9ES52 1191 aa14.78□□□□□ -0.04
Trim23-203ENSMUST00000069187 Mroh1E0CZ22 1640 aa14.77□□□□□ -0.04
Trim23-203ENSMUST00000069187 Setd1aE9PYH6 1716 aa14.77□□□□□ -0.04
Trim23-203ENSMUST00000069187 Tubgcp6G5E8P0 1769 aa14.77□□□□□ -0.05
Trim23-203ENSMUST00000069187 Naip7Q9JIB3 1402 aa14.77□□□□□ -0.05
Trim23-203ENSMUST00000069187 Ercc6l2Q9JIM3 1537 aa14.76□□□□□ -0.05
Trim23-203ENSMUST00000069187 Lrrc7Q80TE7 1490 aa14.75□□□□□ -0.05
Trim23-203ENSMUST00000069187 Nphp4P59240 1425 aa14.75□□□□□ -0.05
Trim23-203ENSMUST00000069187 Fam184bQ0KK56 942 aa14.75□□□□□ -0.05
Trim23-203ENSMUST00000069187 Tmc1Q8R4P5 757 aa14.75□□□□□ -0.05
Trim23-203ENSMUST00000069187 AU015836B2RUM3 263 aa14.75□□□□□ -0.05
Trim23-203ENSMUST00000069187 PrxO55103 1391 aa14.74□□□□□ -0.05
Trim23-203ENSMUST00000069187 Zscan10Q3URR7 782 aa14.73□□□□□ -0.05
Trim23-203ENSMUST00000069187 PalldQ9ET54 1408 aa14.73□□□□□ -0.05
Trim23-203ENSMUST00000069187 Arhgap23Q69ZH9 1483 aa14.73□□□□□ -0.05
Trim23-203ENSMUST00000069187 4933402E13RikQ9D4D2 429 aa14.72□□□□□ -0.05
Trim23-203ENSMUST00000069187 Plxnc1Q9QZC2 1574 aa14.72□□□□□ -0.05
Trim23-203ENSMUST00000069187 Mapk8ip3Q9ESN9 1337 aa14.72□□□□□ -0.05
Trim23-203ENSMUST00000069187 GphnQ8BUV3 769 aaKnown RBP14.71□□□□□ -0.05
Trim23-203ENSMUST00000069187 Chmp5Q9D7S9 219 aa14.71□□□□□ -0.05
Trim23-203ENSMUST00000069187 B4galnt3Q6L8S8 986 aa14.71□□□□□ -0.06
Trim23-203ENSMUST00000069187 Atp2b2Q9R0K7 1198 aa14.71□□□□□ -0.06
Trim23-203ENSMUST00000069187 RictorQ6QI06 1708 aa14.7□□□□□ -0.06
Trim23-203ENSMUST00000069187 Asxl2Q8BZ32 1370 aa14.7□□□□□ -0.06
Trim23-203ENSMUST00000069187 PtprmP28828 1452 aa14.7□□□□□ -0.06
Trim23-203ENSMUST00000069187 Htatsf1Q8BGC0 757 aa14.69□□□□□ -0.06
Trim23-203ENSMUST00000069187 Rrp9Q91WM3 475 aaKnown RBP14.69□□□□□ -0.06
Trim23-203ENSMUST00000069187 Nlrp6Q91WS2 869 aa14.69□□□□□ -0.06
Trim23-203ENSMUST00000069187 Dcaf11Q91VU6 549 aa14.68□□□□□ -0.06
Trim23-203ENSMUST00000069187 Adamtsl3G3UXC7 1706 aa14.68□□□□□ -0.06
Trim23-203ENSMUST00000069187 Smc5Q8CG46 1101 aaKnown RBP14.68□□□□□ -0.06
Trim23-203ENSMUST00000069187 Tex14Q7M6U3 1450 aa14.68□□□□□ -0.06
Trim23-203ENSMUST00000069187 Rwdd1Q9CQK7 243 aa14.67□□□□□ -0.06
Trim23-203ENSMUST00000069187 Plekhh1Q80TI1 1356 aa14.67□□□□□ -0.06
Trim23-203ENSMUST00000069187 Med14A2ABV5 1459 aaKnown RBP14.66□□□□□ -0.06
Trim23-203ENSMUST00000069187 Sbno1Q689Z5 1390 aa14.66□□□□□ -0.06
Trim23-203ENSMUST00000069187 Rad21Q61550 635 aaKnown RBP14.66□□□□□ -0.06
Trim23-203ENSMUST00000069187 Ipo8Q7TMY7 1010 aa14.66□□□□□ -0.06
Trim23-203ENSMUST00000069187 Q7TT23 1179 aa14.66□□□□□ -0.06
Trim23-203ENSMUST00000069187 Prdm2A2A7B5 1709 aaKnown RBP14.65□□□□□ -0.06
Trim23-203ENSMUST00000069187 Gsto1O09131 240 aa14.65□□□□□ -0.06
Trim23-203ENSMUST00000069187 Kif16bB1AVY7 1312 aa14.65□□□□□ -0.06
Trim23-203ENSMUST00000069187 Kif13aQ9EQW7 1749 aa14.65□□□□□ -0.06
Trim23-203ENSMUST00000069187 Pola1P33609 1465 aa14.64□□□□□ -0.07
Trim23-203ENSMUST00000069187 Kif20aP97329 887 aa14.64□□□□□ -0.07
Trim23-203ENSMUST00000069187 Ppp1r9bQ6R891 817 aaKnown RBP14.63□□□□□ -0.07
Trim23-203ENSMUST00000069187 HnrnpmQ9D0E1 729 aaKnown RBP14.63□□□□□ -0.07
Trim23-203ENSMUST00000069187 Cdk5rap2Q8K389 1822 aa14.63□□□□□ -0.07
Trim23-203ENSMUST00000069187 Phf14Q9D4H9 881 aa14.63□□□□□ -0.07
Trim23-203ENSMUST00000069187 Kif7B7ZNG0 1348 aa14.63□□□□□ -0.07
Trim23-203ENSMUST00000069187 Cdk19Q8BWD8 501 aa14.62□□□□□ -0.07
Trim23-203ENSMUST00000069187 InsrP15208 1372 aa14.62□□□□□ -0.07
Trim23-203ENSMUST00000069187 Znf316Q6PGE4 1016 aa14.61□□□□□ -0.07
Trim23-203ENSMUST00000069187 Itsn1Q9Z0R4 1714 aa14.6□□□□□ -0.07
Trim23-203ENSMUST00000069187 Itsn2Q9Z0R6 1659 aa14.6□□□□□ -0.07
Trim23-203ENSMUST00000069187 Dbr1Q923B1 550 aa14.6□□□□□ -0.07
Trim23-203ENSMUST00000069187 Hsp90ab1P11499 724 aaKnown RBP14.59□□□□□ -0.07
Trim23-203ENSMUST00000069187 4930407I10RikD3Z5T8 1512 aa14.59□□□□□ -0.07
Trim23-203ENSMUST00000069187 Eif2s2Q99L45 331 aaKnown RBP14.59□□□□□ -0.07
Trim23-203ENSMUST00000069187 FanciQ8K368 1330 aa14.59□□□□□ -0.07
Trim23-203ENSMUST00000069187 Atf7ipQ7TT18 1306 aa14.58□□□□□ -0.07
Trim23-203ENSMUST00000069187 PzpQ61838 1495 aa14.58□□□□□ -0.08
Trim23-203ENSMUST00000069187 Ak7Q9D2H2 614 aa14.58□□□□□ -0.08
Trim23-203ENSMUST00000069187 DnmbpQ6TXD4 1580 aa14.58□□□□□ -0.08
Trim23-203ENSMUST00000069187 Zranb1Q7M760 708 aa14.58□□□□□ -0.08
Trim23-203ENSMUST00000069187 NgefQ8CHT1 710 aa14.58□□□□□ -0.08
Trim23-203ENSMUST00000069187 Arhgef28P97433 1693 aa14.57□□□□□ -0.08
Trim23-203ENSMUST00000069187 Myom1Q62234 1667 aaKnown RBP14.57□□□□□ -0.08
Trim23-203ENSMUST00000069187 Gm16486A0A1D5RMD1 1434 aa14.57□□□□□ -0.08
Retrieved 100 of 22,080 RNA–protein pairs in 52.8 ms