RNA–Protein interactions for RNA: ENSMUST00000039443.13

Ccdc50-201, Transcript of Coiled-coil domain-containing protein 50, mousemouse

TSL 1 (best) BASIC

Gene Ccdc50, Length 2,192 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc50-201ENSMUST00000039443 Kdm2aP59997 1161 aa24.64■■□□□ 1.54
Ccdc50-201ENSMUST00000039443 Dbr1Q923B1 550 aa24.63■■□□□ 1.53
Ccdc50-201ENSMUST00000039443 Alpk3Q924C5 1678 aa24.63■■□□□ 1.53
Ccdc50-201ENSMUST00000039443 Gtf2e1Q9D0D5 440 aa24.62■■□□□ 1.53
Ccdc50-201ENSMUST00000039443 Gprasp1Q5U4C1 1347 aa24.62■■□□□ 1.53
Ccdc50-201ENSMUST00000039443 Gm20521D3Z5F7 333 aa24.61■■□□□ 1.53
Ccdc50-201ENSMUST00000039443 Ipo8Q7TMY7 1010 aa24.61■■□□□ 1.53
Ccdc50-201ENSMUST00000039443 Golga2Q921M4 999 aa24.61■■□□□ 1.53
Ccdc50-201ENSMUST00000039443 Erich6D3Z6S9 713 aa24.6■■□□□ 1.53
Ccdc50-201ENSMUST00000039443 Nphp4P59240 1425 aa24.59■■□□□ 1.53
Ccdc50-201ENSMUST00000039443 Os9Q8K2C7 672 aa24.58■■□□□ 1.53
Ccdc50-201ENSMUST00000039443 Myom2Q14BI5 1463 aa24.58■■□□□ 1.52
Ccdc50-201ENSMUST00000039443 Dcaf11Q91VU6 549 aa24.57■■□□□ 1.52
Ccdc50-201ENSMUST00000039443 Apbb1Q9QXJ1 710 aa24.57■■□□□ 1.52
Ccdc50-201ENSMUST00000039443 Rsph4aQ8BYM7 716 aa24.56■■□□□ 1.52
Ccdc50-201ENSMUST00000039443 ErbinQ80TH2 1402 aa24.55■■□□□ 1.52
Ccdc50-201ENSMUST00000039443 Uspl1Q3ULM6 1089 aa24.55■■□□□ 1.52
Ccdc50-201ENSMUST00000039443 Neurod2Q62414 383 aa24.54■■□□□ 1.52
Ccdc50-201ENSMUST00000039443 Myom1Q62234 1667 aaKnown RBP24.53■■□□□ 1.52
Ccdc50-201ENSMUST00000039443 Map4k4P97820 1233 aaKnown RBP24.53■■□□□ 1.52
Ccdc50-201ENSMUST00000039443 Talpid3E9PV87 1520 aa24.53■■□□□ 1.52
Ccdc50-201ENSMUST00000039443 Pdlim2Q8R1G6 349 aa24.53■■□□□ 1.52
Ccdc50-201ENSMUST00000039443 Rims1Q99NE5 1463 aa24.53■■□□□ 1.52
Ccdc50-201ENSMUST00000039443 Iqgap3F8VQ29 1632 aa24.52■■□□□ 1.52
Ccdc50-201ENSMUST00000039443 Abca6Q8K441 1624 aa24.52■■□□□ 1.52
Ccdc50-201ENSMUST00000039443 Znf521Q6KAS7 1311 aa24.52■■□□□ 1.52
Ccdc50-201ENSMUST00000039443 KdrP35918 1367 aa24.52■■□□□ 1.52
Ccdc50-201ENSMUST00000039443 Trim30dE9PWL0 497 aa24.52■■□□□ 1.52
Ccdc50-201ENSMUST00000039443 Srpk2O54781 681 aaKnown RBP24.52■■□□□ 1.52
Ccdc50-201ENSMUST00000039443 Prex1Q69ZK0 1650 aa24.52■■□□□ 1.52
Ccdc50-201ENSMUST00000039443 Afap1Q80YS6 731 aa24.52■■□□□ 1.52
Ccdc50-201ENSMUST00000039443 DnmbpQ6TXD4 1580 aa24.51■■□□□ 1.51
Ccdc50-201ENSMUST00000039443 Ak7Q9D2H2 614 aa24.51■■□□□ 1.51
Ccdc50-201ENSMUST00000039443 Kiaa1107Q80TK0 1369 aa24.5■■□□□ 1.51
Ccdc50-201ENSMUST00000039443 Sall3Q62255 1320 aa24.5■■□□□ 1.51
Ccdc50-201ENSMUST00000039443 Usp40Q8BWR4 1235 aa24.5■■□□□ 1.51
Ccdc50-201ENSMUST00000039443 Abca8aQ8K442 1620 aa24.5■■□□□ 1.51
Ccdc50-201ENSMUST00000039443 Tmem131lQ3U3D7 1597 aa24.5■■□□□ 1.51
Ccdc50-201ENSMUST00000039443 Hsp90ab1P11499 724 aaKnown RBP24.5■■□□□ 1.51
Ccdc50-201ENSMUST00000039443 Trim58Q5NCC9 485 aa24.5■■□□□ 1.51
Ccdc50-201ENSMUST00000039443 Cdk5rap2Q8K389 1822 aa24.49■■□□□ 1.51
Ccdc50-201ENSMUST00000039443 Ccdc183A2AJB1 534 aa24.48■■□□□ 1.51
Ccdc50-201ENSMUST00000039443 Ttc21bQ0HA38 1315 aa24.48■■□□□ 1.51
Ccdc50-201ENSMUST00000039443 Ppp1r9bQ6R891 817 aaKnown RBP24.47■■□□□ 1.51
Ccdc50-201ENSMUST00000039443 Myo3aQ8K3H5 1613 aa24.47■■□□□ 1.51
Ccdc50-201ENSMUST00000039443 Fam135bQ9DAI6 1403 aa24.47■■□□□ 1.51
Ccdc50-201ENSMUST00000039443 Uggt1Q6P5E4 1551 aa24.46■■□□□ 1.51
Ccdc50-201ENSMUST00000039443 Tspyl2Q7TQI8 677 aa24.44■■□□□ 1.5
Ccdc50-201ENSMUST00000039443 Htatsf1Q8BGC0 757 aa24.44■■□□□ 1.5
Ccdc50-201ENSMUST00000039443 Eif2s2Q99L45 331 aaKnown RBP24.44■■□□□ 1.5
Ccdc50-201ENSMUST00000039443 CltcQ68FD5 1675 aaKnown RBP24.44■■□□□ 1.5
Ccdc50-201ENSMUST00000039443 Adamts7Q68SA9 1657 aa24.44■■□□□ 1.5
Ccdc50-201ENSMUST00000039443 Safb2Q80YR5 991 aaKnown RBP24.44■■□□□ 1.5
Ccdc50-201ENSMUST00000039443 Sipa1l1Q8C0T5 1782 aa24.43■■□□□ 1.5
Ccdc50-201ENSMUST00000039443 RictorQ6QI06 1708 aa24.42■■□□□ 1.5
Ccdc50-201ENSMUST00000039443 Fan1Q69ZT1 1020 aa24.41■■□□□ 1.5
Ccdc50-201ENSMUST00000039443 Ncbp3Q8BZR9 615 aaKnown RBP24.41■■□□□ 1.5
Ccdc50-201ENSMUST00000039443 Iqsec2Q5DU25 1478 aa24.41■■□□□ 1.5
Ccdc50-201ENSMUST00000039443 Hfm1D3Z4R1 1434 aa24.41■■□□□ 1.5
Ccdc50-201ENSMUST00000039443 Adgrb3Q80ZF8 1522 aa24.39■■□□□ 1.5
Ccdc50-201ENSMUST00000039443 Eif2ak4Q9QZ05 1648 aa24.39■■□□□ 1.5
Ccdc50-201ENSMUST00000039443 MlecQ6ZQI3 291 aaKnown RBP24.39■■□□□ 1.49
Ccdc50-201ENSMUST00000039443 Pank1Q8K4K6 548 aa24.39■■□□□ 1.49
Ccdc50-201ENSMUST00000039443 Ehbp1l1Q99MS7 1716 aa24.39■■□□□ 1.49
Ccdc50-201ENSMUST00000039443 IbtkQ6ZPR6 1352 aaKnown RBP24.37■■□□□ 1.49
Ccdc50-201ENSMUST00000039443 Arhgap23Q69ZH9 1483 aa24.37■■□□□ 1.49
Ccdc50-201ENSMUST00000039443 Efcab6Q6P1E8 1516 aa24.37■■□□□ 1.49
Ccdc50-201ENSMUST00000039443 AatkQ80YE4 1365 aa24.36■■□□□ 1.49
Ccdc50-201ENSMUST00000039443 Stk24Q99KH8 431 aa24.36■■□□□ 1.49
Ccdc50-201ENSMUST00000039443 GsdmaQ9EST1 446 aa24.36■■□□□ 1.49
Ccdc50-201ENSMUST00000039443 Knl1Q66JQ7 1612 aa24.35■■□□□ 1.49
Ccdc50-201ENSMUST00000039443 4930567H17RikQ3V0K5 233 aa24.35■■□□□ 1.49
Ccdc50-201ENSMUST00000039443 Ppp2r3aB2RXC8 1150 aa24.35■■□□□ 1.49
Ccdc50-201ENSMUST00000039443 Duxf3A0A0N4SV92 674 aa24.34■■□□□ 1.49
Ccdc50-201ENSMUST00000039443 Akap12Q9WTQ5 1684 aa24.33■■□□□ 1.49
Ccdc50-201ENSMUST00000039443 Scaf11E9PZM7 1456 aaKnown RBP24.33■■□□□ 1.49
Ccdc50-201ENSMUST00000039443 Plcd4Q8K3R3 807 aa24.33■■□□□ 1.48
Ccdc50-201ENSMUST00000039443 Atl3Q91YH5 541 aa24.33■■□□□ 1.48
Ccdc50-201ENSMUST00000039443 Skint5A7XUY5 1461 aa24.32■■□□□ 1.48
Ccdc50-201ENSMUST00000039443 MaddQ80U28 1577 aa24.32■■□□□ 1.48
Ccdc50-201ENSMUST00000039443 InsrP15208 1372 aa24.31■■□□□ 1.48
Ccdc50-201ENSMUST00000039443 Plxnc1Q9QZC2 1574 aa24.31■■□□□ 1.48
Ccdc50-201ENSMUST00000039443 Puf60Q3UEB3 564 aaKnown RBP24.31■■□□□ 1.48
Ccdc50-201ENSMUST00000039443 Gas2l2Q5SSG4 860 aa24.3■■□□□ 1.48
Ccdc50-201ENSMUST00000039443 Ipo4Q8VI75 1082 aa24.29■■□□□ 1.48
Ccdc50-201ENSMUST00000039443 Rlbp1Q9Z275 317 aa24.29■■□□□ 1.48
Ccdc50-201ENSMUST00000039443 Adgrl1Q80TR1 1466 aa24.29■■□□□ 1.48
Ccdc50-201ENSMUST00000039443 Med14A2ABV5 1459 aaKnown RBP24.28■■□□□ 1.48
Ccdc50-201ENSMUST00000039443 Cald1E9QA15 768 aaKnown RBP24.28■■□□□ 1.48
Ccdc50-201ENSMUST00000039443 Sptbn5F6UCX4 1208 aa24.28■■□□□ 1.48
Ccdc50-201ENSMUST00000039443 4933402E13RikQ9D4D2 429 aa24.27■■□□□ 1.48
Ccdc50-201ENSMUST00000039443 Ino80Q6ZPV2 1559 aa24.27■■□□□ 1.48
Ccdc50-201ENSMUST00000039443 PalldQ9ET54 1408 aa24.26■■□□□ 1.47
Ccdc50-201ENSMUST00000039443 Tecpr2Q3UH45 1423 aa24.26■■□□□ 1.47
Ccdc50-201ENSMUST00000039443 Rabep1O35551 862 aa24.26■■□□□ 1.47
Ccdc50-201ENSMUST00000039443 Ccar1Q8CH18 1146 aaKnown RBP24.26■■□□□ 1.47
Ccdc50-201ENSMUST00000039443 Hs1bp3Q3TC93 395 aa24.25■■□□□ 1.47
Ccdc50-201ENSMUST00000039443 Amer1Q7TS75 1132 aa24.25■■□□□ 1.47
Ccdc50-201ENSMUST00000039443 Tbc1d32Q3URV1 1296 aa24.24■■□□□ 1.47
Ccdc50-201ENSMUST00000039443 Dip2bQ3UH60 1574 aa24.24■■□□□ 1.47
Retrieved 100 of 22,080 RNA–protein pairs in 9.8 ms