RNA–Protein interactions for RNA: ENSMUST00000020827.6

Rnft1-201, Transcript of E3 ubiquitin-protein ligase RNFT1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Rnft1, Length 4,452 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rnft1-201ENSMUST00000020827 Sbno1Q689Z5 1390 aa13.16□□□□□ -0.3
Rnft1-201ENSMUST00000020827 OvosQ3UU35 1456 aa13.16□□□□□ -0.3
Rnft1-201ENSMUST00000020827 Topbp1Q6ZQF0 1515 aa13.16□□□□□ -0.3
Rnft1-201ENSMUST00000020827 Plin1Q8CGN5 517 aa13.16□□□□□ -0.3
Rnft1-201ENSMUST00000020827 ArxO35085 564 aa13.15□□□□□ -0.3
Rnft1-201ENSMUST00000020827 Aplp1Q03157 653 aa13.15□□□□□ -0.3
Rnft1-201ENSMUST00000020827 Shq1Q7TMX5 569 aa13.15□□□□□ -0.3
Rnft1-201ENSMUST00000020827 Cep152A2AUM9 1736 aaKnown RBP13.14□□□□□ -0.31
Rnft1-201ENSMUST00000020827 Kdm2bQ6P1G2 1309 aa13.14□□□□□ -0.31
Rnft1-201ENSMUST00000020827 Nphp4P59240 1425 aa13.13□□□□□ -0.31
Rnft1-201ENSMUST00000020827 Mcm10Q0VBD2 885 aa13.13□□□□□ -0.31
Rnft1-201ENSMUST00000020827 4930567H17RikQ3V0K5 233 aa13.13□□□□□ -0.31
Rnft1-201ENSMUST00000020827 Clasp1Q80TV8 1535 aaKnown RBP13.13□□□□□ -0.31
Rnft1-201ENSMUST00000020827 Adgrl1Q80TR1 1466 aa13.13□□□□□ -0.31
Rnft1-201ENSMUST00000020827 Qser1A2BIE1 1698 aa13.13□□□□□ -0.31
Rnft1-201ENSMUST00000020827 Uspl1Q3ULM6 1089 aa13.13□□□□□ -0.31
Rnft1-201ENSMUST00000020827 Nlrp6Q91WS2 869 aa13.13□□□□□ -0.31
Rnft1-201ENSMUST00000020827 Lrrc7Q80TE7 1490 aa13.12□□□□□ -0.31
Rnft1-201ENSMUST00000020827 Nutm1Q8BHP2 1126 aa13.12□□□□□ -0.31
Rnft1-201ENSMUST00000020827 Ercc6l2Q9JIM3 1537 aa13.12□□□□□ -0.31
Rnft1-201ENSMUST00000020827 Scaf11E9PZM7 1456 aaKnown RBP13.11□□□□□ -0.31
Rnft1-201ENSMUST00000020827 Talpid3E9PV87 1520 aa13.11□□□□□ -0.31
Rnft1-201ENSMUST00000020827 Knl1Q66JQ7 1612 aa13.11□□□□□ -0.31
Rnft1-201ENSMUST00000020827 Golga2Q921M4 999 aa13.11□□□□□ -0.31
Rnft1-201ENSMUST00000020827 Skint5A7XUY5 1461 aa13.1□□□□□ -0.31
Rnft1-201ENSMUST00000020827 Akap12Q9WTQ5 1684 aa13.1□□□□□ -0.31
Rnft1-201ENSMUST00000020827 Znf330Q922H9 316 aa13.1□□□□□ -0.31
Rnft1-201ENSMUST00000020827 Kif13aQ9EQW7 1749 aa13.1□□□□□ -0.31
Rnft1-201ENSMUST00000020827 IbtkQ6ZPR6 1352 aaKnown RBP13.1□□□□□ -0.31
Rnft1-201ENSMUST00000020827 Prrc2bQ7TPM1 1486 aaKnown RBP13.09□□□□□ -0.31
Rnft1-201ENSMUST00000020827 Bcl11aQ9QYE3 773 aa13.09□□□□□ -0.31
Rnft1-201ENSMUST00000020827 Plekhh1Q80TI1 1356 aa13.09□□□□□ -0.31
Rnft1-201ENSMUST00000020827 Ppp1r18Q8BQ30 594 aa13.09□□□□□ -0.31
Rnft1-201ENSMUST00000020827 InsrP15208 1372 aa13.09□□□□□ -0.31
Rnft1-201ENSMUST00000020827 Prkrip1Q9CWV6 186 aaKnown RBP13.09□□□□□ -0.31
Rnft1-201ENSMUST00000020827 DnmbpQ6TXD4 1580 aa13.08□□□□□ -0.31
Rnft1-201ENSMUST00000020827 Ino80Q6ZPV2 1559 aa13.08□□□□□ -0.32
Rnft1-201ENSMUST00000020827 Duxf3A0A0N4SV92 674 aa13.07□□□□□ -0.32
Rnft1-201ENSMUST00000020827 Mroh1E0CZ22 1640 aa13.07□□□□□ -0.32
Rnft1-201ENSMUST00000020827 Ift172Q6VH22 1749 aa13.07□□□□□ -0.32
Rnft1-201ENSMUST00000020827 Kiaa0556Q8C753 1610 aa13.07□□□□□ -0.32
Rnft1-201ENSMUST00000020827 AglF8VPN4 1532 aa13.06□□□□□ -0.32
Rnft1-201ENSMUST00000020827 PrkcshO08795 521 aa13.06□□□□□ -0.32
Rnft1-201ENSMUST00000020827 Nectin2P32507 530 aa13.06□□□□□ -0.32
Rnft1-201ENSMUST00000020827 U2af1Q9D883 239 aaKnown RBP13.06□□□□□ -0.32
Rnft1-201ENSMUST00000020827 NinlQ6ZQ12 1394 aa13.06□□□□□ -0.32
Rnft1-201ENSMUST00000020827 Abca14E9Q8F8 1683 aa13.05□□□□□ -0.32
Rnft1-201ENSMUST00000020827 Atp10aO54827 1508 aa13.05□□□□□ -0.32
Rnft1-201ENSMUST00000020827 Cald1E9QA15 768 aaKnown RBP13.05□□□□□ -0.32
Rnft1-201ENSMUST00000020827 Nkx1-2P42580 305 aa13.04□□□□□ -0.32
Rnft1-201ENSMUST00000020827 Klhdc4Q921I2 584 aa13.04□□□□□ -0.32
Rnft1-201ENSMUST00000020827 Utp14aQ640M1 767 aaKnown RBP13.03□□□□□ -0.32
Rnft1-201ENSMUST00000020827 PalldQ9ET54 1408 aa13.03□□□□□ -0.32
Rnft1-201ENSMUST00000020827 Tsen2Q6P7W5 460 aa13.03□□□□□ -0.32
Rnft1-201ENSMUST00000020827 Cluap1Q8R3P7 413 aa13.03□□□□□ -0.32
Rnft1-201ENSMUST00000020827 Atp2b2Q9R0K7 1198 aa13.03□□□□□ -0.32
Rnft1-201ENSMUST00000020827 Q4VA45 678 aa13.03□□□□□ -0.32
Rnft1-201ENSMUST00000020827 Rwdd1Q9CQK7 243 aa13.03□□□□□ -0.32
Rnft1-201ENSMUST00000020827 Ksr2Q3UVC0 959 aa13.02□□□□□ -0.32
Rnft1-201ENSMUST00000020827 Cdk19Q8BWD8 501 aa13.02□□□□□ -0.32
Rnft1-201ENSMUST00000020827 Myom2Q14BI5 1463 aa13.02□□□□□ -0.32
Rnft1-201ENSMUST00000020827 Snap23O09044 210 aa13.02□□□□□ -0.33
Rnft1-201ENSMUST00000020827 Dusp27Q148W8 1138 aa13.02□□□□□ -0.33
Rnft1-201ENSMUST00000020827 Slc12a5Q91V14 1138 aa13.02□□□□□ -0.33
Rnft1-201ENSMUST00000020827 GsdmaQ9EST1 446 aa13.02□□□□□ -0.33
Rnft1-201ENSMUST00000020827 Exosc9Q9JHI7 438 aaKnown RBP13.02□□□□□ -0.33
Rnft1-201ENSMUST00000020827 Anp32bQ9EST5 272 aaKnown RBP13.02□□□□□ -0.33
Rnft1-201ENSMUST00000020827 Iqsec2Q5DU25 1478 aa13.01□□□□□ -0.33
Rnft1-201ENSMUST00000020827 Cdc42bpgQ80UW5 1551 aa13.01□□□□□ -0.33
Rnft1-201ENSMUST00000020827 Ahdc1Q6PAL7 1594 aaKnown RBP13.01□□□□□ -0.33
Rnft1-201ENSMUST00000020827 UtrnE9Q6R7 3430 aa13.01□□□□□ -0.33
Rnft1-201ENSMUST00000020827 AU019823E9PUQ3 292 aa13.01□□□□□ -0.33
Rnft1-201ENSMUST00000020827 Gprasp1Q5U4C1 1347 aa13.01□□□□□ -0.33
Rnft1-201ENSMUST00000020827 Itsn1Q9Z0R4 1714 aa13.01□□□□□ -0.33
Rnft1-201ENSMUST00000020827 Atf7ipQ7TT18 1306 aa13□□□□□ -0.33
Rnft1-201ENSMUST00000020827 Chmp5Q9D7S9 219 aa13□□□□□ -0.33
Rnft1-201ENSMUST00000020827 Uggt1Q6P5E4 1551 aa12.99□□□□□ -0.33
Rnft1-201ENSMUST00000020827 Birc3O08863 600 aa12.99□□□□□ -0.33
Rnft1-201ENSMUST00000020827 Eif2s2Q99L45 331 aaKnown RBP12.99□□□□□ -0.33
Rnft1-201ENSMUST00000020827 CltcQ68FD5 1675 aaKnown RBP12.98□□□□□ -0.33
Rnft1-201ENSMUST00000020827 Sart3Q9JLI8 962 aaKnown RBP12.98□□□□□ -0.33
Rnft1-201ENSMUST00000020827 NktrP30415 1453 aa12.98□□□□□ -0.33
Rnft1-201ENSMUST00000020827 Iqcf3Q9D498 203 aa12.98□□□□□ -0.33
Rnft1-201ENSMUST00000020827 Tecpr2Q3UH45 1423 aa12.97□□□□□ -0.33
Rnft1-201ENSMUST00000020827 PalmQ9Z0P4 383 aa12.97□□□□□ -0.33
Rnft1-201ENSMUST00000020827 Adgrl3Q80TS3 1537 aa12.97□□□□□ -0.33
Rnft1-201ENSMUST00000020827 MaddQ80U28 1577 aa12.96□□□□□ -0.33
Rnft1-201ENSMUST00000020827 Smc5Q8CG46 1101 aaKnown RBP12.96□□□□□ -0.33
Rnft1-201ENSMUST00000020827 KarsQ99MN1 595 aaKnown RBP12.96□□□□□ -0.33
Rnft1-201ENSMUST00000020827 Ipo9Q91YE6 1041 aa12.96□□□□□ -0.33
Rnft1-201ENSMUST00000020827 SrcapA0A087WQ44 3271 aa12.96□□□□□ -0.33
Rnft1-201ENSMUST00000020827 Chd4Q6PDQ2 1915 aaKnown RBP12.96□□□□□ -0.34
Rnft1-201ENSMUST00000020827 NgefQ8CHT1 710 aa12.96□□□□□ -0.34
Rnft1-201ENSMUST00000020827 Znf521Q6KAS7 1311 aa12.95□□□□□ -0.34
Rnft1-201ENSMUST00000020827 TnikP83510 1323 aa12.95□□□□□ -0.34
Rnft1-201ENSMUST00000020827 Naip7Q9JIB3 1402 aa12.95□□□□□ -0.34
Rnft1-201ENSMUST00000020827 Nrxn1Q9CS84 1514 aa12.94□□□□□ -0.34
Rnft1-201ENSMUST00000020827 Map3k19E9Q3S4 1311 aa12.94□□□□□ -0.34
Rnft1-201ENSMUST00000020827 Uhrf1bp1lA2RSJ4 1457 aa12.93□□□□□ -0.34
Rnft1-201ENSMUST00000020827 Hfm1D3Z4R1 1434 aa12.93□□□□□ -0.34
Retrieved 100 of 22,080 RNA–protein pairs in 39 ms