RNA–Protein interactions for RNA: snR78

snR78, Transcript of C/D box small nucleolar RNA (snoRNA), yeastyeast

Gene snR78, Length 87 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
snR78snR78 YOR394C-AQ8TGJ0 55 aa-3.27□□□□□ -2.93
snR78snR78 YER039C-AP0CD97 72 aa-3.28□□□□□ -2.93
snR78snR78 YGL258W-AQ3E740 77 aa-3.28□□□□□ -2.93
snR78snR78 POL1P13382 1468 aa-3.28□□□□□ -2.94
snR78snR78 UTP10P42945 1769 aaKnown RBP-3.29□□□□□ -2.94
snR78snR78 SCP1Q08873 200 aa-3.29□□□□□ -2.94
snR78snR78 MHF2Q3E829 80 aa-3.3□□□□□ -2.94
snR78snR78 APC1P53886 1748 aa-3.32□□□□□ -2.94
snR78snR78 SPP41P38904 1435 aa-3.32□□□□□ -2.94
snR78snR78 KSH1Q8TGJ3 72 aa-3.32□□□□□ -2.94
snR78snR78 TY3B-GQ99315 1547 aa-3.33□□□□□ -2.94
snR78snR78 YLR146W-AQ2V2P1 62 aa-3.33□□□□□ -2.94
snR78snR78 YIL156W-BQ2V2P4 73 aa-3.33□□□□□ -2.94
snR78snR78 YBR200W-AQ3E755 54 aa-3.33□□□□□ -2.94
snR78snR78 GEA1P47102 1408 aaPredicted RBP-3.35□□□□□ -2.95
snR78snR78 YDR042CQ03205 200 aa-3.35□□□□□ -2.95
snR78snR78 YOR072W-BQ3E832 53 aa-3.36□□□□□ -2.95
snR78snR78 KOG1P38873 1557 aa-3.38□□□□□ -2.95
snR78snR78 CUP1-1P0CX80 61 aa-3.39□□□□□ -2.95
snR78snR78 CUP1-2P0CX81 61 aa-3.39□□□□□ -2.95
snR78snR78 YOR011W-AQ3E807 68 aa-3.39□□□□□ -2.95
snR78snR78 RPA190P10964 1664 aaKnown RBP-3.41□□□□□ -2.96
snR78snR78 RPS27BP38711 82 aa-3.42□□□□□ -2.96
snR78snR78 YDL022C-AP0C5L6 82 aa-3.43□□□□□ -2.96
snR78snR78 WIP1Q2V2P8 89 aa-3.44□□□□□ -2.96
snR78snR78 SUS1Q6WNK7 96 aa-3.44□□□□□ -2.96
snR78snR78 VPS15P22219 1454 aa-3.44□□□□□ -2.96
snR78snR78 GDB1Q06625 1536 aa-3.44□□□□□ -2.96
snR78snR78 ATP17Q06405 101 aa-3.45□□□□□ -2.96
snR78snR78 YBL039W-BP0C268 59 aa-3.47□□□□□ -2.96
snR78snR78 REV3P14284 1504 aa-3.48□□□□□ -2.97
snR78snR78 MSL1P40567 111 aaPredicted RBP-3.48□□□□□ -2.97
snR78snR78 YPL225WQ08971 146 aaKnown RBP-3.48□□□□□ -2.97
snR78snR78 YGR146C-AQ8TGT9 53 aa-3.48□□□□□ -2.97
snR78snR78 HAP1P0CE41 1502 aa-3.49□□□□□ -2.97
snR78snR78 YOR105WQ08504 108 aa-3.49□□□□□ -2.97
snR78snR78 GEA2P39993 1459 aaKnown RBP-3.51□□□□□ -2.97
snR78snR78 YOR304C-AO14468 76 aa-3.53□□□□□ -2.97
snR78snR78 YOR314WQ12506 109 aa-3.54□□□□□ -2.98
snR78snR78 TSC11P40061 1430 aa-3.54□□□□□ -2.98
snR78snR78 Q0017Q9ZZX8 53 aa-3.55□□□□□ -2.98
snR78snR78 FIG2P25653 1609 aa-3.55□□□□□ -2.98
snR78snR78 PDR10P51533 1564 aa-3.56□□□□□ -2.98
snR78snR78 RPS12P48589 143 aaKnown RBP-3.57□□□□□ -2.98
snR78snR78 NUM1Q00402 2748 aa-3.59□□□□□ -2.98
snR78snR78 SIN3P22579 1536 aa-3.6□□□□□ -2.99
snR78snR78 SWR1Q05471 1514 aa-3.6□□□□□ -2.99
snR78snR78 YKL065W-AQ2V2P2 73 aa-3.61□□□□□ -2.99
snR78snR78 YMR082CQ04276 118 aa-3.64□□□□□ -2.99
snR78snR78 CSF1Q12150 2958 aa-3.67□□□□□ -3
snR78snR78 YBR230W-AQ3E762 66 aa-3.67□□□□□ -3
snR78snR78 YOR032W-AQ8TGS1 66 aa-3.67□□□□□ -3
snR78snR78 YOR192C-CQ3E736 78 aa-3.68□□□□□ -3
snR78snR78 YMR175W-AQ3E766 64 aa-3.69□□□□□ -3
snR78snR78 FKS3Q04952 1785 aa-3.74□□□□□ -3.01
snR78snR78 YER137CP40083 148 aaKnown RBP-3.75□□□□□ -3.01
snR78snR78 SPI1P40092 148 aa-3.76□□□□□ -3.01
snR78snR78 YPR145C-AQ2V2P0 78 aa-3.76□□□□□ -3.01
snR78snR78 QCR9P22289 66 aa-3.77□□□□□ -3.01
snR78snR78 YGR121W-AQ3E816 71 aa-3.77□□□□□ -3.01
snR78snR78 YGR035W-AQ45U48 73 aa-3.77□□□□□ -3.01
snR78snR78 THO2P53552 1597 aaKnown RBP-3.77□□□□□ -3.01
snR78snR78 YCL001W-BQ96VH2 84 aa-3.8□□□□□ -3.02
snR78snR78 YGL194C-AQ2V2P6 80 aa-3.81□□□□□ -3.02
snR78snR78 YSP2Q06681 1438 aa-3.81□□□□□ -3.02
snR78snR78 SSS1P35179 80 aa-3.82□□□□□ -3.02
snR78snR78 PAU7P39545 55 aa-3.83□□□□□ -3.02
snR78snR78 YML054C-AQ3E809 52 aa-3.83□□□□□ -3.02
snR78snR78 HUB1Q6Q546 73 aa-3.84□□□□□ -3.02
snR78snR78 DNF1P32660 1571 aa-3.85□□□□□ -3.02
snR78snR78 SWM2P40342 146 aa-3.86□□□□□ -3.03
snR78snR78 TIM12P32830 109 aa-3.87□□□□□ -3.03
snR78snR78 MMS22Q06164 1454 aa-3.89□□□□□ -3.03
snR78snR78 MDS3P53094 1487 aa-3.9□□□□□ -3.03
snR78snR78 TRA1P38811 3744 aa-3.91□□□□□ -3.04
snR78snR78 SNQ2P32568 1501 aaKnown RBP-3.97□□□□□ -3.05
snR78snR78 PDR12Q02785 1511 aa-3.98□□□□□ -3.05
snR78snR78 IRA1P18963 3092 aa-4.01□□□□□ -3.05
snR78snR78 RPL29P05747 59 aaPredicted RBP-4.02□□□□□ -3.05
snR78snR78 ARO1P08566 1588 aaKnown RBP-4.02□□□□□ -3.05
snR78snR78 CWP2P43497 92 aa-4.03□□□□□ -3.05
snR78snR78 YCR075W-AQ3E830 75 aa-4.03□□□□□ -3.05
snR78snR78 YDR034C-AP0C289 58 aa-4.05□□□□□ -3.06
snR78snR78 YLR157W-DP0CE99 70 aa-4.05□□□□□ -3.06
snR78snR78 MLP1Q02455 1875 aaKnown RBP-4.05□□□□□ -3.06
snR78snR78 IRA2P19158 3079 aa-4.06□□□□□ -3.06
snR78snR78 LTE1P07866 1435 aa-4.06□□□□□ -3.06
snR78snR78 PDR15Q04182 1529 aaKnown RBP-4.07□□□□□ -3.06
snR78snR78 RPS30AP0CX33 63 aaKnown RBP-4.08□□□□□ -3.06
snR78snR78 RPS30BP0CX34 63 aaKnown RBP-4.08□□□□□ -3.06
snR78snR78 ERI1P62651 68 aaKnown RBP-4.08□□□□□ -3.06
snR78snR78 ZEO1Q08245 113 aa-4.09□□□□□ -3.06
snR78snR78 TY1B-DR4Q07793 1604 aa-4.1□□□□□ -3.07
snR78snR78 YOR093CQ12275 1648 aa-4.1□□□□□ -3.07
snR78snR78 IQG1Q12280 1495 aa-4.12□□□□□ -3.07
snR78snR78 YMR105W-AQ8TGS8 64 aa-4.13□□□□□ -3.07
snR78snR78 DNF2Q12675 1612 aa-4.14□□□□□ -3.07
snR78snR78 RRP5Q05022 1729 aaKnown RBP-4.15□□□□□ -3.07
snR78snR78 YOR316C-AQ3E806 69 aa-4.17□□□□□ -3.08
snR78snR78 YOL131WQ08270 108 aa-4.2□□□□□ -3.08
Retrieved 100 of 5,963 RNA–protein pairs in 57.8 ms