RNA–Protein interactions for RNA: YPL176C

TRE1, Transcript of Transferrin receptor-like protein, yeastyeast

Gene TRE1, Length 2,352 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TRE1YPL176C YIL156W-BQ2V2P4 73 aa2.97□□□□□ -1.93
TRE1YPL176C TAR1Q8TGM6 124 aa2.96□□□□□ -1.94
TRE1YPL176C PRP8P33334 2413 aaKnown RBP2.96□□□□□ -1.94
TRE1YPL176C RPL33AP05744 107 aaKnown RBP2.95□□□□□ -1.94
TRE1YPL176C YSY6P38374 65 aa2.95□□□□□ -1.94
TRE1YPL176C YSF3P0C074 85 aaPredicted RBP2.95□□□□□ -1.94
TRE1YPL176C SMX2P40204 77 aaKnown RBP2.95□□□□□ -1.94
TRE1YPL176C PAU20Q08322 120 aa2.95□□□□□ -1.94
TRE1YPL176C FMP27Q06179 2628 aa2.95□□□□□ -1.94
TRE1YPL176C MOT1P32333 1867 aa2.95□□□□□ -1.94
TRE1YPL176C SLH1P53327 1967 aaKnown RBP2.95□□□□□ -1.94
TRE1YPL176C YGR035W-AQ45U48 73 aa2.94□□□□□ -1.94
TRE1YPL176C DSE2P38844 325 aa2.94□□□□□ -1.94
TRE1YPL176C YEL008WP40001 126 aa2.94□□□□□ -1.94
TRE1YPL176C BSC4P53841 131 aa2.94□□□□□ -1.94
TRE1YPL176C YDR246W-AQ3E763 66 aa2.94□□□□□ -1.94
TRE1YPL176C CCW14O13547 238 aa2.93□□□□□ -1.94
TRE1YPL176C NOP10Q6Q547 58 aaPredicted RBP2.93□□□□□ -1.94
TRE1YPL176C LCL2Q08045 131 aa2.92□□□□□ -1.94
TRE1YPL176C VAM10Q08474 114 aa2.92□□□□□ -1.94
TRE1YPL176C CCW12Q12127 133 aa2.92□□□□□ -1.94
TRE1YPL176C UTP20P35194 2493 aaKnown RBP2.92□□□□□ -1.94
TRE1YPL176C SPI1P40092 148 aa2.92□□□□□ -1.94
TRE1YPL176C MRPS12P53732 153 aa2.92□□□□□ -1.94
TRE1YPL176C YDR210WQ03482 75 aa2.91□□□□□ -1.94
TRE1YPL176C YKL023C-AQ2V2P3 75 aa2.89□□□□□ -1.95
TRE1YPL176C YDR524C-BQ3E6R4 66 aa2.89□□□□□ -1.95
TRE1YPL176C BRR2P32639 2163 aaKnown RBP2.88□□□□□ -1.95
TRE1YPL176C RPS11AP0CX47 156 aaKnown RBP2.87□□□□□ -1.95
TRE1YPL176C RPS11BP0CX48 156 aaKnown RBP2.87□□□□□ -1.95
TRE1YPL176C YGL041C-BQ3E750 60 aa2.87□□□□□ -1.95
TRE1YPL176C YKL018C-AQ3E7A7 99 aa2.87□□□□□ -1.95
TRE1YPL176C YDL022C-AP0C5L6 82 aa2.87□□□□□ -1.95
TRE1YPL176C PRM7Q12459 698 aa2.87□□□□□ -1.95
TRE1YPL176C YOR032W-AQ8TGS1 66 aa2.87□□□□□ -1.95
TRE1YPL176C AIM19P40502 157 aa2.86□□□□□ -1.95
TRE1YPL176C PAU7P39545 55 aa2.86□□□□□ -1.95
TRE1YPL176C YLR255CO13574 117 aa2.83□□□□□ -1.96
TRE1YPL176C COA3Q3E7B2 85 aa2.83□□□□□ -1.96
TRE1YPL176C YOR034C-AQ3E735 80 aa2.82□□□□□ -1.96
TRE1YPL176C YNL042W-BQ3E7Z2 85 aa2.82□□□□□ -1.96
TRE1YPL176C YCL042WP25572 119 aa2.82□□□□□ -1.96
TRE1YPL176C YBR219CP38317 127 aa2.81□□□□□ -1.96
TRE1YPL176C EDC1P53080 175 aaPredicted RBP2.81□□□□□ -1.96
TRE1YPL176C YGR240C-AQ3E786 66 aa2.81□□□□□ -1.96
TRE1YPL176C YOR192C-CQ3E736 78 aa2.8□□□□□ -1.96
TRE1YPL176C YNL190WP53872 204 aa2.8□□□□□ -1.96
TRE1YPL176C IRA1P18963 3092 aa2.8□□□□□ -1.96
TRE1YPL176C GIS2P53849 153 aaKnown RBP RIP-Chip data2.79□□□□□ -1.96not detected
TRE1YPL176C AQY2P0CD90 149 aa2.78□□□□□ -1.96
TRE1YPL176C RPS30AP0CX33 63 aaKnown RBP2.78□□□□□ -1.97
TRE1YPL176C RPS30BP0CX34 63 aaKnown RBP2.78□□□□□ -1.97
TRE1YPL176C MGR2Q02889 113 aa2.77□□□□□ -1.97
TRE1YPL176C YNL146C-AQ3E7Z1 64 aa2.77□□□□□ -1.97
TRE1YPL176C YMR122W-AQ3E842 84 aa2.77□□□□□ -1.97
TRE1YPL176C YDR182W-AQ3E796 67 aa2.76□□□□□ -1.97
TRE1YPL176C IRA2P19158 3079 aa2.74□□□□□ -1.97
TRE1YPL176C SGF11Q03067 99 aa2.74□□□□□ -1.97
TRE1YPL176C YBR201C-AQ2V2Q3 67 aa2.74□□□□□ -1.97
TRE1YPL176C BLM10P43583 2143 aa2.73□□□□□ -1.97
TRE1YPL176C LCL1Q02786 101 aa2.73□□□□□ -1.97
TRE1YPL176C YPR096CO13587 100 aa2.73□□□□□ -1.97
TRE1YPL176C YHR086W-AQ3E746 53 aa2.73□□□□□ -1.97
TRE1YPL176C RPL43AP0CX25 92 aaKnown RBP2.72□□□□□ -1.97
TRE1YPL176C RPL43BP0CX26 92 aa2.72□□□□□ -1.97
TRE1YPL176C YOL166W-AQ8TGJ1 51 aa2.72□□□□□ -1.97
TRE1YPL176C ATP17Q06405 101 aa2.72□□□□□ -1.97
TRE1YPL176C YNL122CP53921 115 aaPredicted RBP2.71□□□□□ -1.98
TRE1YPL176C YCR001WP25347 104 aa2.7□□□□□ -1.98
TRE1YPL176C Q0032Q9ZZX7 96 aa2.7□□□□□ -1.98
TRE1YPL176C SEC16P48415 2195 aaKnown RBP2.7□□□□□ -1.98
TRE1YPL176C MVB12P42939 101 aa2.69□□□□□ -1.98
TRE1YPL176C YMR007WQ03675 126 aa2.69□□□□□ -1.98
TRE1YPL176C YBR032WP38223 100 aa2.69□□□□□ -1.98
TRE1YPL176C SHU1P38751 150 aa2.69□□□□□ -1.98
TRE1YPL176C YIL086CP40503 102 aa2.69□□□□□ -1.98
TRE1YPL176C BEM2P39960 2167 aaKnown RBP2.68□□□□□ -1.98
TRE1YPL176C HUB1Q6Q546 73 aa2.68□□□□□ -1.98
TRE1YPL176C YDL012CQ12489 107 aa2.67□□□□□ -1.98
TRE1YPL176C YJL009WP47078 108 aa2.67□□□□□ -1.98
TRE1YPL176C ATP18P81450 59 aa2.67□□□□□ -1.98
TRE1YPL176C POL2P21951 2222 aaKnown RBP2.65□□□□□ -1.98
TRE1YPL176C SDH6Q3E785 79 aa2.64□□□□□ -1.99
TRE1YPL176C CSF1Q12150 2958 aa2.63□□□□□ -1.99
TRE1YPL176C YHR212W-AP0CX91 67 aa2.61□□□□□ -1.99
TRE1YPL176C MDN1Q12019 4910 aaKnown RBP2.61□□□□□ -1.99
TRE1YPL176C HFA1P32874 2273 aa2.6□□□□□ -1.99
TRE1YPL176C YOL097W-AQ3E7Y9 61 aa2.6□□□□□ -1.99
TRE1YPL176C HUG1Q6Q5K6 68 aa2.6□□□□□ -1.99
TRE1YPL176C MEC1P38111 2368 aa2.59□□□□□ -2
TRE1YPL176C YOR072WQ08486 104 aa2.58□□□□□ -2
TRE1YPL176C YBR056W-AI2HB52 66 aa2.58□□□□□ -2
TRE1YPL176C YLR146W-AQ2V2P1 62 aa2.58□□□□□ -2
TRE1YPL176C YOL013W-AP0C272 63 aaPredicted RBP2.57□□□□□ -2
TRE1YPL176C YMR001C-AQ8TGS9 76 aa2.57□□□□□ -2
TRE1YPL176C YJR107C-AP0CT86 78 aa2.57□□□□□ -2
TRE1YPL176C COX7P10174 60 aa2.56□□□□□ -2
TRE1YPL176C YLR157W-DP0CE99 70 aa2.56□□□□□ -2
TRE1YPL176C YJR128WP47162 119 aa2.55□□□□□ -2
TRE1YPL176C YPR108W-AQ3E7B3 70 aa2.55□□□□□ -2
Retrieved 100 of 5,963 RNA–protein pairs in 52.5 ms