RNA–Protein interactions for RNA: YPL054W

LEE1, Transcript of Zinc-finger protein of unknown function, yeast

Gene LEE1, Length 906 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
LEE1	YPL054W	YGL258W-A	Q3E740	77 aa		-0.58	□□□□□ -2.5
LEE1	YPL054W	XRN1	P22147	1528 aa	Known RBP	-0.59	□□□□□ -2.5
LEE1	YPL054W	YER039C-A	P0CD97	72 aa		-0.59	□□□□□ -2.5
LEE1	YPL054W	LSM2	P38203	95 aa	Known RBP	-0.59	□□□□□ -2.5
LEE1	YPL054W	PDR11	P40550	1411 aa		-0.59	□□□□□ -2.5
LEE1	YPL054W	GEA1	P47102	1408 aa	Predicted RBP	-0.6	□□□□□ -2.51
LEE1	YPL054W	MSL1	P40567	111 aa	Predicted RBP	-0.6	□□□□□ -2.51
LEE1	YPL054W	YOR105W	Q08504	108 aa		-0.6	□□□□□ -2.51
LEE1	YPL054W	NOP10	Q6Q547	58 aa	Predicted RBP	-0.6	□□□□□ -2.51
LEE1	YPL054W	IRC20	Q06554	1556 aa		-0.61	□□□□□ -2.51
LEE1	YPL054W	RPS12	P48589	143 aa	Known RBP	-0.61	□□□□□ -2.51
LEE1	YPL054W	POC4	Q12245	148 aa	Predicted RBP	-0.61	□□□□□ -2.51
LEE1	YPL054W	YOR343C	Q12484	108 aa		-0.61	□□□□□ -2.51
LEE1	YPL054W	YDR119W-A	Q2V2P9	66 aa		-0.61	□□□□□ -2.51
LEE1	YPL054W	YLL006W-A	Q3E814	58 aa		-0.61	□□□□□ -2.51
LEE1	YPL054W	REV3	P14284	1504 aa		-0.61	□□□□□ -2.51
LEE1	YPL054W	GEA2	P39993	1459 aa	Known RBP	-0.61	□□□□□ -2.51
LEE1	YPL054W	SWR1	Q05471	1514 aa		-0.62	□□□□□ -2.51
LEE1	YPL054W	SCP1	Q08873	200 aa		-0.62	□□□□□ -2.51
LEE1	YPL054W	YDR524C-B	Q3E6R4	66 aa		-0.62	□□□□□ -2.51
LEE1	YPL054W	RRT15	Q3E811	62 aa		-0.62	□□□□□ -2.51
LEE1	YPL054W	KSH1	Q8TGJ3	72 aa		-0.62	□□□□□ -2.51
LEE1	YPL054W	YOR072W-B	Q3E832	53 aa		-0.63	□□□□□ -2.51
LEE1	YPL054W	YCL001W-B	Q96VH2	84 aa		-0.63	□□□□□ -2.51
LEE1	YPL054W	TY3B-G	Q99315	1547 aa		-0.64	□□□□□ -2.51
LEE1	YPL054W	RPS27A	P35997	82 aa	Known RBP	-0.64	□□□□□ -2.51
LEE1	YPL054W	YER137C	P40083	148 aa	Known RBP	-0.64	□□□□□ -2.51
LEE1	YPL054W	YOR394C-A	Q8TGJ0	55 aa		-0.64	□□□□□ -2.51
LEE1	YPL054W	GDB1	Q06625	1536 aa		-0.64	□□□□□ -2.51
LEE1	YPL054W	POL1	P13382	1468 aa		-0.65	□□□□□ -2.51
LEE1	YPL054W	YIL156W-B	Q2V2P4	73 aa		-0.65	□□□□□ -2.51
LEE1	YPL054W	TSC11	P40061	1430 aa		-0.65	□□□□□ -2.51
LEE1	YPL054W	DYN1	P36022	4092 aa		-0.65	□□□□□ -2.51
LEE1	YPL054W	YOR314W	Q12506	109 aa		-0.66	□□□□□ -2.52
LEE1	YPL054W	VPS15	P22219	1454 aa		-0.67	□□□□□ -2.52
LEE1	YPL054W	SIN3	P22579	1536 aa		-0.67	□□□□□ -2.52
LEE1	YPL054W	YBL039W-B	P0C268	59 aa		-0.67	□□□□□ -2.52
LEE1	YPL054W	ATP17	Q06405	101 aa		-0.67	□□□□□ -2.52
LEE1	YPL054W	YKL065W-A	Q2V2P2	73 aa		-0.67	□□□□□ -2.52
LEE1	YPL054W	YBR200W-A	Q3E755	54 aa		-0.67	□□□□□ -2.52
LEE1	YPL054W	YOR011W-A	Q3E807	68 aa		-0.67	□□□□□ -2.52
LEE1	YPL054W	MDN1	Q12019	4910 aa	Known RBP	-0.68	□□□□□ -2.52
LEE1	YPL054W	YMR082C	Q04276	118 aa		-0.69	□□□□□ -2.52
LEE1	YPL054W	CSF1	Q12150	2958 aa		-0.7	□□□□□ -2.52
LEE1	YPL054W	YDL022C-A	P0C5L6	82 aa		-0.7	□□□□□ -2.52
LEE1	YPL054W	ZEO1	Q08245	113 aa		-0.7	□□□□□ -2.52
LEE1	YPL054W	YOR192C-C	Q3E736	78 aa		-0.7	□□□□□ -2.52
LEE1	YPL054W	YGR146C-A	Q8TGT9	53 aa		-0.7	□□□□□ -2.52
LEE1	YPL054W	PDR10	P51533	1564 aa		-0.7	□□□□□ -2.52
LEE1	YPL054W	MDS3	P53094	1487 aa		-0.71	□□□□□ -2.52
LEE1	YPL054W	QCR9	P22289	66 aa		-0.72	□□□□□ -2.52
LEE1	YPL054W	YBR230W-A	Q3E762	66 aa		-0.72	□□□□□ -2.52
LEE1	YPL054W	FIG2	P25653	1609 aa		-0.72	□□□□□ -2.52
LEE1	YPL054W	SSS1	P35179	80 aa		-0.73	□□□□□ -2.53
LEE1	YPL054W	PAU7	P39545	55 aa		-0.73	□□□□□ -2.53
LEE1	YPL054W	HUB1	Q6Q546	73 aa		-0.73	□□□□□ -2.53
LEE1	YPL054W	RRP5	Q05022	1729 aa	Known RBP	-0.73	□□□□□ -2.53
LEE1	YPL054W	HAP1	P0CE41	1502 aa		-0.74	□□□□□ -2.53
LEE1	YPL054W	YPR145C-A	Q2V2P0	78 aa		-0.74	□□□□□ -2.53
LEE1	YPL054W	YOR032W-A	Q8TGS1	66 aa		-0.74	□□□□□ -2.53
LEE1	YPL054W	RPS27B	P38711	82 aa		-0.75	□□□□□ -2.53
LEE1	YPL054W	YGL194C-A	Q2V2P6	80 aa		-0.75	□□□□□ -2.53
LEE1	YPL054W	Q0017	Q9ZZX8	53 aa		-0.75	□□□□□ -2.53
LEE1	YPL054W	MMS22	Q06164	1454 aa		-0.75	□□□□□ -2.53
LEE1	YPL054W	NUM1	Q00402	2748 aa		-0.76	□□□□□ -2.53
LEE1	YPL054W	YSP2	Q06681	1438 aa		-0.76	□□□□□ -2.53
LEE1	YPL054W	SWM2	P40342	146 aa		-0.77	□□□□□ -2.53
LEE1	YPL054W	DNF1	P32660	1571 aa		-0.78	□□□□□ -2.53
LEE1	YPL054W	CWP2	P43497	92 aa		-0.78	□□□□□ -2.53
LEE1	YPL054W	YMR175W-A	Q3E766	64 aa		-0.78	□□□□□ -2.53
LEE1	YPL054W	ESC1	Q03661	1658 aa	Known RBP	-0.78	□□□□□ -2.53
LEE1	YPL054W	LTE1	P07866	1435 aa		-0.79	□□□□□ -2.54
LEE1	YPL054W	YML054C-A	Q3E809	52 aa		-0.79	□□□□□ -2.54
LEE1	YPL054W	YGR121W-A	Q3E816	71 aa		-0.79	□□□□□ -2.54
LEE1	YPL054W	YCR075W-A	Q3E830	75 aa		-0.79	□□□□□ -2.54
LEE1	YPL054W	YGR035W-A	Q45U48	73 aa		-0.8	□□□□□ -2.54
LEE1	YPL054W	YLR157W-D	P0CE99	70 aa		-0.82	□□□□□ -2.54
LEE1	YPL054W	TIM12	P32830	109 aa		-0.82	□□□□□ -2.54
LEE1	YPL054W	IML1	P47170	1584 aa		-0.83	□□□□□ -2.54
LEE1	YPL054W	PDR12	Q02785	1511 aa		-0.83	□□□□□ -2.54
LEE1	YPL054W	CUP1-1	P0CX80	61 aa		-0.83	□□□□□ -2.54
LEE1	YPL054W	CUP1-2	P0CX81	61 aa		-0.83	□□□□□ -2.54
LEE1	YPL054W	SPI1	P40092	148 aa		-0.83	□□□□□ -2.54
LEE1	YPL054W	TY1B-DR4	Q07793	1604 aa		-0.83	□□□□□ -2.54
LEE1	YPL054W	DNF2	Q12675	1612 aa		-0.83	□□□□□ -2.54
LEE1	YPL054W	ARO1	P08566	1588 aa	Known RBP	-0.83	□□□□□ -2.54
LEE1	YPL054W	ESP1	Q03018	1630 aa		-0.84	□□□□□ -2.54
LEE1	YPL054W	YOL131W	Q08270	108 aa		-0.84	□□□□□ -2.54
LEE1	YPL054W	RPS30A	P0CX33	63 aa	Known RBP	-0.85	□□□□□ -2.55
LEE1	YPL054W	RPS30B	P0CX34	63 aa	Known RBP	-0.85	□□□□□ -2.55
LEE1	YPL054W	SNQ2	P32568	1501 aa	Known RBP	-0.85	□□□□□ -2.55
LEE1	YPL054W	PDR15	Q04182	1529 aa	Known RBP	-0.85	□□□□□ -2.55
LEE1	YPL054W	YOR093C	Q12275	1648 aa		-0.86	□□□□□ -2.55
LEE1	YPL054W	IQG1	Q12280	1495 aa		-0.86	□□□□□ -2.55
LEE1	YPL054W	THO2	P53552	1597 aa	Known RBP	-0.87	□□□□□ -2.55
LEE1	YPL054W	ERI1	P62651	68 aa	Known RBP	-0.87	□□□□□ -2.55
LEE1	YPL054W	RPL29	P05747	59 aa	Predicted RBP	-0.88	□□□□□ -2.55
LEE1	YPL054W	YDR034C-A	P0C289	58 aa		-0.88	□□□□□ -2.55
LEE1	YPL054W	IRA1	P18963	3092 aa		-0.88	□□□□□ -2.55
LEE1	YPL054W	YMR105W-A	Q8TGS8	64 aa		-0.89	□□□□□ -2.55

Retrieved 100 of 5,963 RNA–protein pairs in 64.1 ms