RNA–Protein interactions for RNA: YNL228W

YNL228W, Transcript of Dubious open reading frame, yeastyeast

Gene YNL228W, Length 777 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YNL228WYNL228W NUP159P40477 1460 aa1.39□□□□□ -2.19
YNL228WYNL228W EDC1P53080 175 aaPredicted RBP1.39□□□□□ -2.19
YNL228WYNL228W YGR035W-AQ45U48 73 aa1.39□□□□□ -2.19
YNL228WYNL228W ATX1P38636 73 aa1.38□□□□□ -2.19
YNL228WYNL228W TIM12P32830 109 aa1.37□□□□□ -2.19
YNL228WYNL228W DOP1Q03921 1698 aa1.33□□□□□ -2.2
YNL228WYNL228W ATP17Q06405 101 aa1.33□□□□□ -2.2
YNL228WYNL228W APC1P53886 1748 aa1.29□□□□□ -2.2
YNL228WYNL228W UFD4P33202 1483 aa1.29□□□□□ -2.2
YNL228WYNL228W PMD1P32634 1753 aa1.29□□□□□ -2.2
YNL228WYNL228W PAI3P01094 68 aa1.28□□□□□ -2.2
YNL228WYNL228W TY2B-LR1P0C2J3 1770 aa1.28□□□□□ -2.2
YNL228WYNL228W TY2B-FP0CX63 1770 aa1.28□□□□□ -2.2
YNL228WYNL228W TY2B-GR2P0CX64 1770 aa1.28□□□□□ -2.2
YNL228WYNL228W TY2B-DR2Q03494 1770 aa1.28□□□□□ -2.2
YNL228WYNL228W TY2B-OR1Q12113 1770 aa1.28□□□□□ -2.2
YNL228WYNL228W TY2B-BQ12491 1770 aa1.28□□□□□ -2.2
YNL228WYNL228W TY2B-OR2Q12501 1770 aa1.28□□□□□ -2.2
YNL228WYNL228W YOR032W-AQ8TGS1 66 aa1.27□□□□□ -2.21
YNL228WYNL228W BPH1P25356 2167 aa1.27□□□□□ -2.21
YNL228WYNL228W PAU7P39545 55 aa1.26□□□□□ -2.21
YNL228WYNL228W YKL018C-AQ3E7A7 99 aa1.26□□□□□ -2.21
YNL228WYNL228W TY2B-DR3Q07791 1770 aaKnown RBP1.24□□□□□ -2.21
YNL228WYNL228W YFL041W-AQ3E817 63 aa1.23□□□□□ -2.21
YNL228WYNL228W YGR025WP53216 100 aa1.22□□□□□ -2.21
YNL228WYNL228W SPI1P40092 148 aa1.2□□□□□ -2.22
YNL228WYNL228W SSS1P35179 80 aa1.19□□□□□ -2.22
YNL228WYNL228W TAO3P40468 2376 aa1.19□□□□□ -2.22
YNL228WYNL228W ERI1P62651 68 aaKnown RBP1.17□□□□□ -2.22
YNL228WYNL228W YLR146W-AQ2V2P1 62 aa1.17□□□□□ -2.22
YNL228WYNL228W SMC4Q12267 1418 aa1.15□□□□□ -2.22
YNL228WYNL228W YBL044WP38194 122 aa1.15□□□□□ -2.23
YNL228WYNL228W SCC2Q04002 1493 aa1.15□□□□□ -2.23
YNL228WYNL228W TCB3Q03640 1545 aaKnown RBP1.14□□□□□ -2.23
YNL228WYNL228W IML1P47170 1584 aa1.11□□□□□ -2.23
YNL228WYNL228W ARO1P08566 1588 aaKnown RBP1.1□□□□□ -2.23
YNL228WYNL228W YBR200W-AQ3E755 54 aa1.09□□□□□ -2.23
YNL228WYNL228W MMS1Q06211 1407 aa1.08□□□□□ -2.24
YNL228WYNL228W RPS27AP35997 82 aaKnown RBP1.07□□□□□ -2.24
YNL228WYNL228W SEN1Q00416 2231 aaKnown RBP1.07□□□□□ -2.24
YNL228WYNL228W HUB1Q6Q546 73 aa1.06□□□□□ -2.24
YNL228WYNL228W DNF1P32660 1571 aa1.05□□□□□ -2.24
YNL228WYNL228W IRC20Q06554 1556 aa1.05□□□□□ -2.24
YNL228WYNL228W YBL039W-BP0C268 59 aa1.05□□□□□ -2.24
YNL228WYNL228W OLI1P61829 76 aa1.05□□□□□ -2.24
YNL228WYNL228W YDR246W-AQ3E763 66 aa1.05□□□□□ -2.24
YNL228WYNL228W YOR011W-AQ3E807 68 aa1.05□□□□□ -2.24
YNL228WYNL228W YCR108CQ3E819 63 aa1.05□□□□□ -2.24
YNL228WYNL228W KOG1P38873 1557 aa1.04□□□□□ -2.24
YNL228WYNL228W DNF2Q12675 1612 aa1.04□□□□□ -2.24
YNL228WYNL228W YOR394C-AQ8TGJ0 55 aa1.03□□□□□ -2.24
YNL228WYNL228W VPS15P22219 1454 aa1.01□□□□□ -2.25
YNL228WYNL228W YSY6P38374 65 aa1.01□□□□□ -2.25
YNL228WYNL228W RPO31P04051 1460 aa0.99□□□□□ -2.25
YNL228WYNL228W IQG1Q12280 1495 aa0.98□□□□□ -2.25
YNL228WYNL228W YDR182W-AQ3E796 67 aa0.97□□□□□ -2.25
YNL228WYNL228W MYO4P32492 1471 aa0.95□□□□□ -2.26
YNL228WYNL228W RPS30AP0CX33 63 aaKnown RBP0.94□□□□□ -2.26
YNL228WYNL228W RPS30BP0CX34 63 aaKnown RBP0.94□□□□□ -2.26
YNL228WYNL228W YIL102C-AQ2V2P5 75 aa0.94□□□□□ -2.26
YNL228WYNL228W TY3B-GQ99315 1547 aa0.94□□□□□ -2.26
YNL228WYNL228W RRP5Q05022 1729 aaKnown RBP0.92□□□□□ -2.26
YNL228WYNL228W FKS3Q04952 1785 aa0.91□□□□□ -2.26
YNL228WYNL228W YOL131WQ08270 108 aa0.9□□□□□ -2.27
YNL228WYNL228W SIP18P50263 79 aa0.87□□□□□ -2.27
YNL228WYNL228W RPO21P04050 1733 aaKnown RBP0.86□□□□□ -2.27
YNL228WYNL228W HAP1P0CE41 1502 aa0.86□□□□□ -2.27
YNL228WYNL228W BCK1Q01389 1478 aa0.84□□□□□ -2.28
YNL228WYNL228W YOR008C-AQ3E7B9 74 aa0.8□□□□□ -2.28
YNL228WYNL228W VTH1P40438 1549 aa0.78□□□□□ -2.28
YNL228WYNL228W VTH2P40890 1549 aa0.78□□□□□ -2.28
YNL228WYNL228W YFR010W-AP0C5N0 62 aa0.77□□□□□ -2.29
YNL228WYNL228W YOL166W-AQ8TGJ1 51 aa0.77□□□□□ -2.29
YNL228WYNL228W VMR1P38735 1592 aa0.77□□□□□ -2.29
YNL228WYNL228W VMA9Q3E7B6 73 aa0.75□□□□□ -2.29
YNL228WYNL228W YMR001C-AQ8TGS9 76 aa0.75□□□□□ -2.29
YNL228WYNL228W TOS6P48560 102 aa0.71□□□□□ -2.3
YNL228WYNL228W YLR157W-DP0CE99 70 aa0.69□□□□□ -2.3
YNL228WYNL228W PDR12Q02785 1511 aa0.69□□□□□ -2.3
YNL228WYNL228W PDR15Q04182 1529 aaKnown RBP0.69□□□□□ -2.3
YNL228WYNL228W RPS27BP38711 82 aa0.68□□□□□ -2.3
YNL228WYNL228W YBR230W-AQ3E762 66 aa0.66□□□□□ -2.3
YNL228WYNL228W RPS29AP41057 56 aaKnown RBP0.64□□□□□ -2.31
YNL228WYNL228W SPO14P36126 1683 aa0.58□□□□□ -2.32
YNL228WYNL228W UTP20P35194 2493 aaKnown RBP0.56□□□□□ -2.32
YNL228WYNL228W YGR146C-AQ8TGT9 53 aa0.53□□□□□ -2.32
YNL228WYNL228W YKL023C-AQ2V2P3 75 aa0.49□□□□□ -2.33
YNL228WYNL228W PDR5P33302 1511 aaKnown RBP0.47□□□□□ -2.33
YNL228WYNL228W YOR192C-CQ3E736 78 aa0.46□□□□□ -2.34
YNL228WYNL228W TY1B-DR4Q07793 1604 aa0.42□□□□□ -2.34
YNL228WYNL228W YCF1P39109 1515 aaKnown RBP0.41□□□□□ -2.34
YNL228WYNL228W YBT1P32386 1661 aa0.4□□□□□ -2.34
YNL228WYNL228W CDC25P04821 1589 aa0.36□□□□□ -2.35
YNL228WYNL228W COA2Q3E823 68 aa0.36□□□□□ -2.35
YNL228WYNL228W YDR524C-BQ3E6R4 66 aa0.35□□□□□ -2.35
YNL228WYNL228W YLL006W-AQ3E814 58 aa0.34□□□□□ -2.36
YNL228WYNL228W TOR1P35169 2470 aa0.31□□□□□ -2.36
YNL228WYNL228W SPT6P23615 1451 aaKnown RBP0.29□□□□□ -2.36
YNL228WYNL228W SNQ2P32568 1501 aaKnown RBP0.28□□□□□ -2.37
YNL228WYNL228W YGL258W-AQ3E740 77 aa0.25□□□□□ -2.37
Retrieved 100 of 5,963 RNA–protein pairs in 35 ms