RNA–Protein interactions for RNA: YMR173W

DDR48, Transcript of DNA damage-responsive protein, yeastyeast

Gene DDR48, Length 1,293 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
DDR48YMR173W YDR182W-AQ3E796 67 aa-0.15□□□□□ -2.43
DDR48YMR173W UTP20P35194 2493 aaKnown RBP-0.15□□□□□ -2.43
DDR48YMR173W POC4Q12245 148 aaPredicted RBP-0.16□□□□□ -2.44
DDR48YMR173W SMC4Q12267 1418 aa-0.16□□□□□ -2.44
DDR48YMR173W ATP17Q06405 101 aa-0.17□□□□□ -2.44
DDR48YMR173W APC1P53886 1748 aa-0.18□□□□□ -2.44
DDR48YMR173W LTE1P07866 1435 aa-0.18□□□□□ -2.44
DDR48YMR173W YDL022C-AP0C5L6 82 aa-0.18□□□□□ -2.44
DDR48YMR173W QCR9P22289 66 aa-0.19□□□□□ -2.44
DDR48YMR173W SWM2P40342 146 aa-0.19□□□□□ -2.44
DDR48YMR173W MMS22Q06164 1454 aa-0.2□□□□□ -2.44
DDR48YMR173W SIN3P22579 1536 aa-0.2□□□□□ -2.44
DDR48YMR173W YBR200W-AQ3E755 54 aa-0.21□□□□□ -2.44
DDR48YMR173W YOR394C-AQ8TGJ0 55 aa-0.21□□□□□ -2.44
DDR48YMR173W MLP1Q02455 1875 aaKnown RBP-0.21□□□□□ -2.44
DDR48YMR173W RPS27AP35997 82 aaKnown RBP-0.22□□□□□ -2.44
DDR48YMR173W PAU7P39545 55 aa-0.22□□□□□ -2.44
DDR48YMR173W TOS6P48560 102 aa-0.22□□□□□ -2.44
DDR48YMR173W YOR011W-AQ3E807 68 aa-0.22□□□□□ -2.44
DDR48YMR173W TY2B-CP25384 1770 aa-0.23□□□□□ -2.45
DDR48YMR173W TY2B-DR1Q12472 1770 aa-0.23□□□□□ -2.45
DDR48YMR173W YBL039W-BP0C268 59 aa-0.23□□□□□ -2.45
DDR48YMR173W YGR121W-AQ3E816 71 aa-0.23□□□□□ -2.45
DDR48YMR173W TY2B-LR1P0C2J3 1770 aa-0.24□□□□□ -2.45
DDR48YMR173W TY2B-FP0CX63 1770 aa-0.24□□□□□ -2.45
DDR48YMR173W TY2B-GR2P0CX64 1770 aa-0.24□□□□□ -2.45
DDR48YMR173W TY2B-DR2Q03494 1770 aa-0.24□□□□□ -2.45
DDR48YMR173W TY2B-DR3Q07791 1770 aaKnown RBP-0.24□□□□□ -2.45
DDR48YMR173W TY2B-OR1Q12113 1770 aa-0.24□□□□□ -2.45
DDR48YMR173W TY2B-BQ12491 1770 aa-0.24□□□□□ -2.45
DDR48YMR173W TY2B-OR2Q12501 1770 aa-0.24□□□□□ -2.45
DDR48YMR173W YSP2Q06681 1438 aa-0.24□□□□□ -2.45
DDR48YMR173W KOG1P38873 1557 aa-0.24□□□□□ -2.45
DDR48YMR173W ESC1Q03661 1658 aaKnown RBP-0.24□□□□□ -2.45
DDR48YMR173W TY1B-NL2Q99337 1749 aaKnown RBP-0.24□□□□□ -2.45
DDR48YMR173W SSS1P35179 80 aa-0.25□□□□□ -2.45
DDR48YMR173W YGR035W-AQ45U48 73 aa-0.25□□□□□ -2.45
DDR48YMR173W YOR032W-AQ8TGS1 66 aa-0.25□□□□□ -2.45
DDR48YMR173W IRC20Q06554 1556 aa-0.25□□□□□ -2.45
DDR48YMR173W VTH1P40438 1549 aa-0.26□□□□□ -2.45
DDR48YMR173W VTH2P40890 1549 aa-0.26□□□□□ -2.45
DDR48YMR173W HUB1Q6Q546 73 aa-0.26□□□□□ -2.45
DDR48YMR173W TIM12P32830 109 aa-0.27□□□□□ -2.45
DDR48YMR173W SKI3P17883 1432 aaKnown RBP-0.28□□□□□ -2.45
DDR48YMR173W TOR1P35169 2470 aa-0.28□□□□□ -2.45
DDR48YMR173W COA2Q3E823 68 aa-0.28□□□□□ -2.45
DDR48YMR173W SPO14P36126 1683 aa-0.28□□□□□ -2.45
DDR48YMR173W ESP1Q03018 1630 aa-0.31□□□□□ -2.46
DDR48YMR173W YDR119W-AQ2V2P9 66 aa-0.32□□□□□ -2.46
DDR48YMR173W TY3B-GQ99315 1547 aa-0.33□□□□□ -2.46
DDR48YMR173W RPO21P04050 1733 aaKnown RBP-0.33□□□□□ -2.46
DDR48YMR173W YGL258W-AQ3E740 77 aa-0.34□□□□□ -2.46
DDR48YMR173W YBR230W-AQ3E762 66 aa-0.34□□□□□ -2.46
DDR48YMR173W YHR213W-AQ8TGT4 77 aa-0.34□□□□□ -2.46
DDR48YMR173W SPI1P40092 148 aa-0.35□□□□□ -2.47
DDR48YMR173W ERI1P62651 68 aaKnown RBP-0.35□□□□□ -2.47
DDR48YMR173W YHR050W-AQ05451 56 aa-0.35□□□□□ -2.47
DDR48YMR173W YDR524C-BQ3E6R4 66 aa-0.35□□□□□ -2.47
DDR48YMR173W YLL006W-AQ3E814 58 aa-0.35□□□□□ -2.47
DDR48YMR173W YGR146C-AQ8TGT9 53 aa-0.37□□□□□ -2.47
DDR48YMR173W UFD4P33202 1483 aa-0.37□□□□□ -2.47
DDR48YMR173W HAP1P0CE41 1502 aa-0.38□□□□□ -2.47
DDR48YMR173W RPS27BP38711 82 aa-0.38□□□□□ -2.47
DDR48YMR173W YOL131WQ08270 108 aa-0.38□□□□□ -2.47
DDR48YMR173W YFL041W-AQ3E817 63 aa-0.38□□□□□ -2.47
DDR48YMR173W RPS30AP0CX33 63 aaKnown RBP-0.39□□□□□ -2.47
DDR48YMR173W RPS30BP0CX34 63 aaKnown RBP-0.39□□□□□ -2.47
DDR48YMR173W PAI3P01094 68 aa-0.4□□□□□ -2.47
DDR48YMR173W FKS3Q04952 1785 aa-0.41□□□□□ -2.47
DDR48YMR173W IML1P47170 1584 aa-0.41□□□□□ -2.48
DDR48YMR173W YSY6P38374 65 aa-0.42□□□□□ -2.48
DDR48YMR173W IQG1Q12280 1495 aa-0.42□□□□□ -2.48
DDR48YMR173W YLR157W-DP0CE99 70 aa-0.43□□□□□ -2.48
DDR48YMR173W YOR072W-BQ3E832 53 aa-0.43□□□□□ -2.48
DDR48YMR173W DNF2Q12675 1612 aa-0.43□□□□□ -2.48
DDR48YMR173W ARO1P08566 1588 aaKnown RBP-0.45□□□□□ -2.48
DDR48YMR173W VPS15P22219 1454 aa-0.45□□□□□ -2.48
DDR48YMR173W NUP159P40477 1460 aa-0.46□□□□□ -2.48
DDR48YMR173W FMP27Q06179 2628 aa-0.46□□□□□ -2.48
DDR48YMR173W DOP1Q03921 1698 aa-0.46□□□□□ -2.48
DDR48YMR173W RRP5Q05022 1729 aaKnown RBP-0.47□□□□□ -2.48
DDR48YMR173W YIL102C-AQ2V2P5 75 aa-0.48□□□□□ -2.49
DDR48YMR173W YOL166W-AQ8TGJ1 51 aa-0.5□□□□□ -2.49
DDR48YMR173W RPO31P04051 1460 aa-0.5□□□□□ -2.49
DDR48YMR173W BCK1Q01389 1478 aa-0.51□□□□□ -2.49
DDR48YMR173W PDR12Q02785 1511 aa-0.51□□□□□ -2.49
DDR48YMR173W PDR15Q04182 1529 aaKnown RBP-0.51□□□□□ -2.49
DDR48YMR173W YPR117WQ06116 2489 aa-0.52□□□□□ -2.49
DDR48YMR173W SCC2Q04002 1493 aa-0.53□□□□□ -2.49
DDR48YMR173W DNF1P32660 1571 aa-0.54□□□□□ -2.5
DDR48YMR173W YBR056W-AI2HB52 66 aa-0.55□□□□□ -2.5
DDR48YMR173W TOR2P32600 2474 aaKnown RBP-0.56□□□□□ -2.5
DDR48YMR173W VMR1P38735 1592 aa-0.56□□□□□ -2.5
DDR48YMR173W MEC1P38111 2368 aa-0.57□□□□□ -2.5
DDR48YMR173W MYO4P32492 1471 aa-0.58□□□□□ -2.5
DDR48YMR173W YOR192C-CQ3E736 78 aa-0.58□□□□□ -2.5
DDR48YMR173W SNQ2P32568 1501 aaKnown RBP-0.59□□□□□ -2.5
DDR48YMR173W TCB3Q03640 1545 aaKnown RBP-0.59□□□□□ -2.5
DDR48YMR173W TEL1P38110 2787 aa-0.61□□□□□ -2.51
DDR48YMR173W VMA9Q3E7B6 73 aa-0.63□□□□□ -2.51
Retrieved 100 of 5,963 RNA–protein pairs in 67.8 ms