RNA–Protein interactions for RNA: YML041C

VPS71, Transcript of Nucleosome-binding component of the SWR1 complex, yeastyeast

Gene VPS71, Length 843 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS71YML041C EDC1P53080 175 aaPredicted RBP1.29□□□□□ -2.2
VPS71YML041C YBR016WP38216 128 aa1.28□□□□□ -2.2
VPS71YML041C APC1P53886 1748 aa1.28□□□□□ -2.2
VPS71YML041C TAO3P40468 2376 aa1.28□□□□□ -2.2
VPS71YML041C YDL022C-AP0C5L6 82 aa1.27□□□□□ -2.21
VPS71YML041C NUP159P40477 1460 aa1.26□□□□□ -2.21
VPS71YML041C PAI3P01094 68 aa1.26□□□□□ -2.21
VPS71YML041C ATP17Q06405 101 aa1.25□□□□□ -2.21
VPS71YML041C PMD1P32634 1753 aa1.24□□□□□ -2.21
VPS71YML041C YGR035W-AQ45U48 73 aa1.24□□□□□ -2.21
VPS71YML041C TIM12P32830 109 aa1.23□□□□□ -2.21
VPS71YML041C PAU7P39545 55 aa1.23□□□□□ -2.21
VPS71YML041C DOP1Q03921 1698 aa1.23□□□□□ -2.21
VPS71YML041C UFD4P33202 1483 aa1.2□□□□□ -2.22
VPS71YML041C YFL041W-AQ3E817 63 aa1.18□□□□□ -2.22
VPS71YML041C TY2B-LR1P0C2J3 1770 aa1.18□□□□□ -2.22
VPS71YML041C TY2B-FP0CX63 1770 aa1.18□□□□□ -2.22
VPS71YML041C TY2B-GR2P0CX64 1770 aa1.18□□□□□ -2.22
VPS71YML041C TY2B-DR2Q03494 1770 aa1.18□□□□□ -2.22
VPS71YML041C TY2B-OR1Q12113 1770 aa1.18□□□□□ -2.22
VPS71YML041C TY2B-BQ12491 1770 aa1.18□□□□□ -2.22
VPS71YML041C TY2B-OR2Q12501 1770 aa1.18□□□□□ -2.22
VPS71YML041C YGR025WP53216 100 aa1.17□□□□□ -2.22
VPS71YML041C YLR146W-AQ2V2P1 62 aa1.17□□□□□ -2.22
VPS71YML041C SSS1P35179 80 aa1.15□□□□□ -2.23
VPS71YML041C YKL018C-AQ3E7A7 99 aa1.15□□□□□ -2.23
VPS71YML041C TY2B-DR3Q07791 1770 aaKnown RBP1.15□□□□□ -2.23
VPS71YML041C SEN1Q00416 2231 aaKnown RBP1.14□□□□□ -2.23
VPS71YML041C SPI1P40092 148 aa1.14□□□□□ -2.23
VPS71YML041C YOR032W-AQ8TGS1 66 aa1.14□□□□□ -2.23
VPS71YML041C HUB1Q6Q546 73 aa1.11□□□□□ -2.23
VPS71YML041C SMC4Q12267 1418 aa1.11□□□□□ -2.23
VPS71YML041C IML1P47170 1584 aa1.1□□□□□ -2.23
VPS71YML041C SCC2Q04002 1493 aa1.1□□□□□ -2.23
VPS71YML041C ERI1P62651 68 aaKnown RBP1.09□□□□□ -2.23
VPS71YML041C OLI1P61829 76 aa1.08□□□□□ -2.24
VPS71YML041C TCB3Q03640 1545 aaKnown RBP1.07□□□□□ -2.24
VPS71YML041C KOG1P38873 1557 aa1.07□□□□□ -2.24
VPS71YML041C YBL044WP38194 122 aa1.05□□□□□ -2.24
VPS71YML041C YOR011W-AQ3E807 68 aa1.05□□□□□ -2.24
VPS71YML041C YBR200W-AQ3E755 54 aa1.04□□□□□ -2.24
VPS71YML041C MMS1Q06211 1407 aa1.04□□□□□ -2.24
VPS71YML041C YBL039W-BP0C268 59 aa1.03□□□□□ -2.24
VPS71YML041C IQG1Q12280 1495 aa1.03□□□□□ -2.24
VPS71YML041C ARO1P08566 1588 aaKnown RBP1.02□□□□□ -2.25
VPS71YML041C YSY6P38374 65 aa1.02□□□□□ -2.25
VPS71YML041C YOR394C-AQ8TGJ0 55 aa1.01□□□□□ -2.25
VPS71YML041C RPO31P04051 1460 aa1□□□□□ -2.25
VPS71YML041C VPS15P22219 1454 aa1□□□□□ -2.25
VPS71YML041C YDR182W-AQ3E796 67 aa1□□□□□ -2.25
VPS71YML041C DNF2Q12675 1612 aa1□□□□□ -2.25
VPS71YML041C DNF1P32660 1571 aa1□□□□□ -2.25
VPS71YML041C IRC20Q06554 1556 aa1□□□□□ -2.25
VPS71YML041C RRP5Q05022 1729 aaKnown RBP0.98□□□□□ -2.25
VPS71YML041C RPS27AP35997 82 aaKnown RBP0.97□□□□□ -2.25
VPS71YML041C YIL102C-AQ2V2P5 75 aa0.97□□□□□ -2.25
VPS71YML041C YCR108CQ3E819 63 aa0.97□□□□□ -2.25
VPS71YML041C MYO4P32492 1471 aa0.97□□□□□ -2.25
VPS71YML041C YDR246W-AQ3E763 66 aa0.96□□□□□ -2.26
VPS71YML041C FKS3Q04952 1785 aa0.96□□□□□ -2.26
VPS71YML041C RPS30AP0CX33 63 aaKnown RBP0.93□□□□□ -2.26
VPS71YML041C RPS30BP0CX34 63 aaKnown RBP0.93□□□□□ -2.26
VPS71YML041C SIP18P50263 79 aa0.92□□□□□ -2.26
VPS71YML041C YOL131WQ08270 108 aa0.92□□□□□ -2.26
VPS71YML041C TY3B-GQ99315 1547 aa0.91□□□□□ -2.26
VPS71YML041C RPO21P04050 1733 aaKnown RBP0.9□□□□□ -2.27
VPS71YML041C BCK1Q01389 1478 aa0.89□□□□□ -2.27
VPS71YML041C YOR008C-AQ3E7B9 74 aa0.89□□□□□ -2.27
VPS71YML041C VMA9Q3E7B6 73 aa0.86□□□□□ -2.27
VPS71YML041C NUM1Q00402 2748 aa0.84□□□□□ -2.28
VPS71YML041C YMR001C-AQ8TGS9 76 aa0.83□□□□□ -2.28
VPS71YML041C YPR117WQ06116 2489 aa0.82□□□□□ -2.28
VPS71YML041C VMR1P38735 1592 aa0.82□□□□□ -2.28
VPS71YML041C HAP1P0CE41 1502 aa0.81□□□□□ -2.28
VPS71YML041C YFR010W-AP0C5N0 62 aa0.81□□□□□ -2.28
VPS71YML041C YBR230W-AQ3E762 66 aa0.79□□□□□ -2.28
VPS71YML041C YOL166W-AQ8TGJ1 51 aa0.78□□□□□ -2.28
VPS71YML041C VTH1P40438 1549 aa0.78□□□□□ -2.28
VPS71YML041C VTH2P40890 1549 aa0.78□□□□□ -2.28
VPS71YML041C YLR157W-DP0CE99 70 aa0.77□□□□□ -2.29
VPS71YML041C TOS6P48560 102 aa0.76□□□□□ -2.29
VPS71YML041C PDR15Q04182 1529 aaKnown RBP0.74□□□□□ -2.29
VPS71YML041C TOR1P35169 2470 aa0.73□□□□□ -2.29
VPS71YML041C UTP20P35194 2493 aaKnown RBP0.72□□□□□ -2.29
VPS71YML041C MDN1Q12019 4910 aaKnown RBP0.71□□□□□ -2.3
VPS71YML041C PDR12Q02785 1511 aa0.71□□□□□ -2.3
VPS71YML041C RPS29AP41057 56 aaKnown RBP0.71□□□□□ -2.3
VPS71YML041C MON2P48563 1636 aaPredicted RBP0.7□□□□□ -2.3
VPS71YML041C SPO14P36126 1683 aa0.69□□□□□ -2.3
VPS71YML041C RPS27BP38711 82 aa0.68□□□□□ -2.3
VPS71YML041C YKL023C-AQ2V2P3 75 aa0.65□□□□□ -2.31
VPS71YML041C YGR146C-AQ8TGT9 53 aa0.64□□□□□ -2.31
VPS71YML041C PDR5P33302 1511 aaKnown RBP0.64□□□□□ -2.31
VPS71YML041C COA2Q3E823 68 aa0.63□□□□□ -2.31
VPS71YML041C GCN1P33892 2672 aaKnown RBP0.62□□□□□ -2.31
VPS71YML041C TEL1P38110 2787 aa0.62□□□□□ -2.31
VPS71YML041C TOM1Q03280 3268 aa0.61□□□□□ -2.31
VPS71YML041C FMP27Q06179 2628 aa0.61□□□□□ -2.31
VPS71YML041C YCF1P39109 1515 aaKnown RBP0.57□□□□□ -2.32
VPS71YML041C CUP1-1P0CX80 61 aa0.55□□□□□ -2.32
Retrieved 100 of 5,963 RNA–protein pairs in 95.7 ms