RNA–Protein interactions for RNA: YJL036W

SNX4, Transcript of Sorting nexin, yeastyeast

Gene SNX4, Length 1,272 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SNX4YJL036W APC1P53886 1748 aa0.78□□□□□ -2.28
SNX4YJL036W YIL134C-AQ45U18 67 aa0.78□□□□□ -2.28
SNX4YJL036W YHR213W-AQ8TGT4 77 aa0.78□□□□□ -2.28
SNX4YJL036W BPH1P25356 2167 aa0.77□□□□□ -2.29
SNX4YJL036W PMD1P32634 1753 aa0.76□□□□□ -2.29
SNX4YJL036W DOP1Q03921 1698 aa0.76□□□□□ -2.29
SNX4YJL036W NUP159P40477 1460 aa0.76□□□□□ -2.29
SNX4YJL036W YGR035W-AQ45U48 73 aa0.75□□□□□ -2.29
SNX4YJL036W TY2B-LR1P0C2J3 1770 aa0.73□□□□□ -2.29
SNX4YJL036W TY2B-FP0CX63 1770 aa0.73□□□□□ -2.29
SNX4YJL036W TY2B-GR2P0CX64 1770 aa0.73□□□□□ -2.29
SNX4YJL036W TY2B-DR2Q03494 1770 aa0.73□□□□□ -2.29
SNX4YJL036W TY2B-OR1Q12113 1770 aa0.73□□□□□ -2.29
SNX4YJL036W TY2B-BQ12491 1770 aa0.73□□□□□ -2.29
SNX4YJL036W TY2B-OR2Q12501 1770 aa0.73□□□□□ -2.29
SNX4YJL036W LSM2P38203 95 aaKnown RBP0.72□□□□□ -2.29
SNX4YJL036W ATP17Q06405 101 aa0.72□□□□□ -2.29
SNX4YJL036W YGR025WP53216 100 aa0.71□□□□□ -2.3
SNX4YJL036W TY2B-DR3Q07791 1770 aaKnown RBP0.7□□□□□ -2.3
SNX4YJL036W TIM12P32830 109 aa0.7□□□□□ -2.3
SNX4YJL036W UFD4P33202 1483 aa0.69□□□□□ -2.3
SNX4YJL036W PAU7P39545 55 aa0.66□□□□□ -2.3
SNX4YJL036W YOR032W-AQ8TGS1 66 aa0.66□□□□□ -2.3
SNX4YJL036W SEN1Q00416 2231 aaKnown RBP0.65□□□□□ -2.31
SNX4YJL036W PAI3P01094 68 aa0.64□□□□□ -2.31
SNX4YJL036W SPI1P40092 148 aa0.64□□□□□ -2.31
SNX4YJL036W ARO1P08566 1588 aaKnown RBP0.64□□□□□ -2.31
SNX4YJL036W MMS1Q06211 1407 aa0.64□□□□□ -2.31
SNX4YJL036W SMC4Q12267 1418 aa0.64□□□□□ -2.31
SNX4YJL036W YBL044WP38194 122 aa0.63□□□□□ -2.31
SNX4YJL036W YKL018C-AQ3E7A7 99 aa0.63□□□□□ -2.31
SNX4YJL036W YFL041W-AQ3E817 63 aa0.63□□□□□ -2.31
SNX4YJL036W IML1P47170 1584 aa0.62□□□□□ -2.31
SNX4YJL036W SCC2Q04002 1493 aa0.61□□□□□ -2.31
SNX4YJL036W SSS1P35179 80 aa0.6□□□□□ -2.31
SNX4YJL036W ERI1P62651 68 aaKnown RBP0.6□□□□□ -2.31
SNX4YJL036W YLR146W-AQ2V2P1 62 aa0.6□□□□□ -2.31
SNX4YJL036W KOG1P38873 1557 aa0.6□□□□□ -2.31
SNX4YJL036W IRC20Q06554 1556 aa0.6□□□□□ -2.31
SNX4YJL036W TCB3Q03640 1545 aaKnown RBP0.59□□□□□ -2.31
SNX4YJL036W DNF1P32660 1571 aa0.57□□□□□ -2.32
SNX4YJL036W RPS27AP35997 82 aaKnown RBP0.57□□□□□ -2.32
SNX4YJL036W YCR108CQ3E819 63 aa0.57□□□□□ -2.32
SNX4YJL036W YBR200W-AQ3E755 54 aa0.56□□□□□ -2.32
SNX4YJL036W RPO31P04051 1460 aa0.55□□□□□ -2.32
SNX4YJL036W OLI1P61829 76 aa0.55□□□□□ -2.32
SNX4YJL036W YOR011W-AQ3E807 68 aa0.55□□□□□ -2.32
SNX4YJL036W DNF2Q12675 1612 aa0.55□□□□□ -2.32
SNX4YJL036W HUB1Q6Q546 73 aa0.54□□□□□ -2.32
SNX4YJL036W VPS15P22219 1454 aa0.54□□□□□ -2.32
SNX4YJL036W YBL039W-BP0C268 59 aa0.53□□□□□ -2.32
SNX4YJL036W YDR246W-AQ3E763 66 aa0.53□□□□□ -2.32
SNX4YJL036W YOR394C-AQ8TGJ0 55 aa0.53□□□□□ -2.32
SNX4YJL036W IQG1Q12280 1495 aa0.53□□□□□ -2.33
SNX4YJL036W FKS3Q04952 1785 aa0.51□□□□□ -2.33
SNX4YJL036W RRP5Q05022 1729 aaKnown RBP0.51□□□□□ -2.33
SNX4YJL036W TY3B-GQ99315 1547 aa0.51□□□□□ -2.33
SNX4YJL036W RPO21P04050 1733 aaKnown RBP0.5□□□□□ -2.33
SNX4YJL036W YSY6P38374 65 aa0.49□□□□□ -2.33
SNX4YJL036W MYO4P32492 1471 aa0.48□□□□□ -2.33
SNX4YJL036W YDR182W-AQ3E796 67 aa0.48□□□□□ -2.33
SNX4YJL036W BCK1Q01389 1478 aa0.48□□□□□ -2.33
SNX4YJL036W HAP1P0CE41 1502 aa0.46□□□□□ -2.34
SNX4YJL036W RPS30AP0CX33 63 aaKnown RBP0.45□□□□□ -2.34
SNX4YJL036W RPS30BP0CX34 63 aaKnown RBP0.45□□□□□ -2.34
SNX4YJL036W VTH1P40438 1549 aa0.44□□□□□ -2.34
SNX4YJL036W VTH2P40890 1549 aa0.44□□□□□ -2.34
SNX4YJL036W YIL102C-AQ2V2P5 75 aa0.44□□□□□ -2.34
SNX4YJL036W UTP20P35194 2493 aaKnown RBP0.43□□□□□ -2.34
SNX4YJL036W VMR1P38735 1592 aa0.43□□□□□ -2.34
SNX4YJL036W SIP18P50263 79 aa0.42□□□□□ -2.34
SNX4YJL036W YOR008C-AQ3E7B9 74 aa0.4□□□□□ -2.35
SNX4YJL036W YOL131WQ08270 108 aa0.39□□□□□ -2.35
SNX4YJL036W YMR001C-AQ8TGS9 76 aa0.36□□□□□ -2.35
SNX4YJL036W RPS29AP41057 56 aaKnown RBP0.35□□□□□ -2.35
SNX4YJL036W TOS6P48560 102 aa0.35□□□□□ -2.35
SNX4YJL036W YOL166W-AQ8TGJ1 51 aa0.35□□□□□ -2.35
SNX4YJL036W PDR12Q02785 1511 aa0.34□□□□□ -2.35
SNX4YJL036W PDR15Q04182 1529 aaKnown RBP0.33□□□□□ -2.36
SNX4YJL036W RPS27BP38711 82 aa0.32□□□□□ -2.36
SNX4YJL036W SPO14P36126 1683 aa0.31□□□□□ -2.36
SNX4YJL036W YBR230W-AQ3E762 66 aa0.31□□□□□ -2.36
SNX4YJL036W VMA9Q3E7B6 73 aa0.31□□□□□ -2.36
SNX4YJL036W YLR157W-DP0CE99 70 aa0.3□□□□□ -2.36
SNX4YJL036W YFR010W-AP0C5N0 62 aa0.29□□□□□ -2.36
SNX4YJL036W TOR1P35169 2470 aa0.24□□□□□ -2.37
SNX4YJL036W TY1B-DR4Q07793 1604 aa0.22□□□□□ -2.37
SNX4YJL036W YGR146C-AQ8TGT9 53 aa0.21□□□□□ -2.38
SNX4YJL036W YKL023C-AQ2V2P3 75 aa0.18□□□□□ -2.38
SNX4YJL036W PDR5P33302 1511 aaKnown RBP0.18□□□□□ -2.38
SNX4YJL036W YBT1P32386 1661 aa0.18□□□□□ -2.38
SNX4YJL036W YCF1P39109 1515 aaKnown RBP0.17□□□□□ -2.38
SNX4YJL036W YDR524C-BQ3E6R4 66 aa0.14□□□□□ -2.39
SNX4YJL036W COA2Q3E823 68 aa0.13□□□□□ -2.39
SNX4YJL036W CDC25P04821 1589 aa0.12□□□□□ -2.39
SNX4YJL036W YOR192C-CQ3E736 78 aa0.11□□□□□ -2.39
SNX4YJL036W SNQ2P32568 1501 aaKnown RBP0.08□□□□□ -2.4
SNX4YJL036W YLL006W-AQ3E814 58 aa0.08□□□□□ -2.4
SNX4YJL036W NUP188P52593 1655 aaKnown RBP0.06□□□□□ -2.4
SNX4YJL036W YOR093CQ12275 1648 aa0.05□□□□□ -2.4
Retrieved 100 of 5,963 RNA–protein pairs in 72.6 ms