RNA–Protein interactions for RNA: YFL002C

SPB4, Transcript of Putative ATP-dependent RNA helicase, yeastyeast

Gene SPB4, Length 1,821 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SPB4YFL002C TY1B-PR1P0C2I9 1755 aaKnown RBP1.22□□□□□ -2.21
SPB4YFL002C TY1B-ER2Q03619 1755 aa1.22□□□□□ -2.21
SPB4YFL002C TY1B-DR1Q03855 1755 aa1.22□□□□□ -2.21
SPB4YFL002C TY1B-ML1Q04711 1755 aaKnown RBP1.22□□□□□ -2.21
SPB4YFL002C TY1B-LR1Q12088 1755 aaKnown RBP1.22□□□□□ -2.21
SPB4YFL002C TY1B-GR2Q12269 1755 aa1.22□□□□□ -2.21
SPB4YFL002C YOR032W-AQ8TGS1 66 aa1.22□□□□□ -2.21
SPB4YFL002C TY1B-DR3Q99231 1755 aa1.21□□□□□ -2.22
SPB4YFL002C EDC1P53080 175 aaPredicted RBP1.21□□□□□ -2.22
SPB4YFL002C TY1B-DR4Q07793 1604 aa1.21□□□□□ -2.22
SPB4YFL002C SSS1P35179 80 aa1.2□□□□□ -2.22
SPB4YFL002C DOP1Q03921 1698 aa1.19□□□□□ -2.22
SPB4YFL002C TCB3Q03640 1545 aaKnown RBP1.17□□□□□ -2.22
SPB4YFL002C SPI1P40092 148 aa1.17□□□□□ -2.22
SPB4YFL002C ERI1P62651 68 aaKnown RBP1.17□□□□□ -2.22
SPB4YFL002C HKR1P41809 1802 aa1.17□□□□□ -2.22
SPB4YFL002C YLR146W-AQ2V2P1 62 aa1.15□□□□□ -2.23
SPB4YFL002C SPT6P23615 1451 aaKnown RBP1.14□□□□□ -2.23
SPB4YFL002C HIR3P47171 1648 aa1.13□□□□□ -2.23
SPB4YFL002C TY2B-LR1P0C2J3 1770 aa1.13□□□□□ -2.23
SPB4YFL002C TY2B-FP0CX63 1770 aa1.13□□□□□ -2.23
SPB4YFL002C TY2B-GR2P0CX64 1770 aa1.13□□□□□ -2.23
SPB4YFL002C TY1B-JR1P47098 1755 aa1.13□□□□□ -2.23
SPB4YFL002C TY1B-ML2Q03434 1755 aaKnown RBP1.13□□□□□ -2.23
SPB4YFL002C TY2B-DR2Q03494 1770 aa1.13□□□□□ -2.23
SPB4YFL002C TY1B-ER1Q03612 1755 aa1.13□□□□□ -2.23
SPB4YFL002C TY2B-OR1Q12113 1770 aa1.13□□□□□ -2.23
SPB4YFL002C TY1B-OLQ12273 1755 aa1.13□□□□□ -2.23
SPB4YFL002C TY2B-BQ12491 1770 aa1.13□□□□□ -2.23
SPB4YFL002C TY2B-OR2Q12501 1770 aa1.13□□□□□ -2.23
SPB4YFL002C KOG1P38873 1557 aa1.13□□□□□ -2.23
SPB4YFL002C SCC2Q04002 1493 aa1.12□□□□□ -2.23
SPB4YFL002C TY2B-DR3Q07791 1770 aaKnown RBP1.11□□□□□ -2.23
SPB4YFL002C PEP1P32319 1579 aa1.1□□□□□ -2.23
SPB4YFL002C ATG2P53855 1592 aa1.1□□□□□ -2.23
SPB4YFL002C THO2P53552 1597 aaKnown RBP1.09□□□□□ -2.23
SPB4YFL002C SSK2P53599 1579 aa1.09□□□□□ -2.24
SPB4YFL002C APC1P53886 1748 aa1.08□□□□□ -2.24
SPB4YFL002C HUB1Q6Q546 73 aa1.08□□□□□ -2.24
SPB4YFL002C YSY6P38374 65 aa1.07□□□□□ -2.24
SPB4YFL002C YDR246W-AQ3E763 66 aa1.07□□□□□ -2.24
SPB4YFL002C PMD1P32634 1753 aa1.06□□□□□ -2.24
SPB4YFL002C SMC4Q12267 1418 aa1.06□□□□□ -2.24
SPB4YFL002C YBR200W-AQ3E755 54 aa1.06□□□□□ -2.24
SPB4YFL002C YGR025WP53216 100 aa1.05□□□□□ -2.24
SPB4YFL002C YOL131WQ08270 108 aa1.05□□□□□ -2.24
SPB4YFL002C TOM1Q03280 3268 aa1.05□□□□□ -2.24
SPB4YFL002C YBL039W-BP0C268 59 aa1.05□□□□□ -2.24
SPB4YFL002C YCF1P39109 1515 aaKnown RBP1.04□□□□□ -2.24
SPB4YFL002C RPO31P04051 1460 aa1.04□□□□□ -2.24
SPB4YFL002C DNF1P32660 1571 aa1.03□□□□□ -2.24
SPB4YFL002C IML1P47170 1584 aa1.03□□□□□ -2.24
SPB4YFL002C VPS15P22219 1454 aa1.03□□□□□ -2.24
SPB4YFL002C YBL044WP38194 122 aa1.03□□□□□ -2.25
SPB4YFL002C YIL102C-AQ2V2P5 75 aa1.03□□□□□ -2.25
SPB4YFL002C YOR011W-AQ3E807 68 aa1.03□□□□□ -2.25
SPB4YFL002C CDC25P04821 1589 aa1.02□□□□□ -2.25
SPB4YFL002C RKR1Q04781 1562 aa1.02□□□□□ -2.25
SPB4YFL002C YBR056W-AI2HB52 66 aa1.02□□□□□ -2.25
SPB4YFL002C STU1P38198 1513 aa1.02□□□□□ -2.25
SPB4YFL002C OLI1P61829 76 aa1.01□□□□□ -2.25
SPB4YFL002C YDR182W-AQ3E796 67 aa1.01□□□□□ -2.25
SPB4YFL002C RPS30AP0CX33 63 aaKnown RBP1.01□□□□□ -2.25
SPB4YFL002C RPS30BP0CX34 63 aaKnown RBP1.01□□□□□ -2.25
SPB4YFL002C RPS27AP35997 82 aaKnown RBP1.01□□□□□ -2.25
SPB4YFL002C DNF2Q12675 1612 aa1□□□□□ -2.25
SPB4YFL002C MYO4P32492 1471 aa1□□□□□ -2.25
SPB4YFL002C RPO21P04050 1733 aaKnown RBP1□□□□□ -2.25
SPB4YFL002C VPS13Q07878 3144 aa1□□□□□ -2.25
SPB4YFL002C YOR394C-AQ8TGJ0 55 aa1□□□□□ -2.25
SPB4YFL002C VTH1P40438 1549 aa1□□□□□ -2.25
SPB4YFL002C VTH2P40890 1549 aa1□□□□□ -2.25
SPB4YFL002C ULS1Q08562 1619 aa1□□□□□ -2.25
SPB4YFL002C IQG1Q12280 1495 aa0.99□□□□□ -2.25
SPB4YFL002C MLP2P40457 1679 aa0.99□□□□□ -2.25
SPB4YFL002C SNQ2P32568 1501 aaKnown RBP0.99□□□□□ -2.25
SPB4YFL002C YFR010W-AP0C5N0 62 aa0.99□□□□□ -2.25
SPB4YFL002C ARO1P08566 1588 aaKnown RBP0.98□□□□□ -2.25
SPB4YFL002C TY3B-GQ99315 1547 aa0.98□□□□□ -2.25
SPB4YFL002C SEN1Q00416 2231 aaKnown RBP0.98□□□□□ -2.25
SPB4YFL002C YBT1P32386 1661 aa0.98□□□□□ -2.25
SPB4YFL002C SPO14P36126 1683 aa0.98□□□□□ -2.25
SPB4YFL002C IRC20Q06554 1556 aa0.98□□□□□ -2.25
SPB4YFL002C PDR15Q04182 1529 aaKnown RBP0.98□□□□□ -2.25
SPB4YFL002C PDR12Q02785 1511 aa0.97□□□□□ -2.25
SPB4YFL002C NUP170P38181 1502 aa0.95□□□□□ -2.26
SPB4YFL002C CHC1P22137 1653 aaKnown RBP0.95□□□□□ -2.26
SPB4YFL002C MMS1Q06211 1407 aa0.95□□□□□ -2.26
SPB4YFL002C TAO3P40468 2376 aa0.95□□□□□ -2.26
SPB4YFL002C VMA9Q3E7B6 73 aa0.94□□□□□ -2.26
SPB4YFL002C BUD3P25558 1636 aa0.94□□□□□ -2.26
SPB4YFL002C YOR093CQ12275 1648 aa0.94□□□□□ -2.26
SPB4YFL002C YCR108CQ3E819 63 aa0.94□□□□□ -2.26
SPB4YFL002C VMR1P38735 1592 aa0.93□□□□□ -2.26
SPB4YFL002C NUP188P52593 1655 aaKnown RBP0.91□□□□□ -2.26
SPB4YFL002C RRP5Q05022 1729 aaKnown RBP0.91□□□□□ -2.26
SPB4YFL002C USO1P25386 1790 aa0.91□□□□□ -2.26
SPB4YFL002C IRA1P18963 3092 aa0.91□□□□□ -2.26
SPB4YFL002C PDR5P33302 1511 aaKnown RBP0.91□□□□□ -2.26
SPB4YFL002C GCN2P15442 1659 aa0.9□□□□□ -2.26
Retrieved 100 of 5,963 RNA–protein pairs in 77.5 ms