RNA–Protein interactions for RNA: YEL048C

TCA17, Transcript of Component of transport protein particle (TRAPP) complex II, yeastyeast

Gene TCA17, Length 459 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TCA17YEL048C TY1B-PR1P0C2I9 1755 aaKnown RBP0.23□□□□□ -2.37
TCA17YEL048C TY1B-ER2Q03619 1755 aa0.23□□□□□ -2.37
TCA17YEL048C TY1B-DR1Q03855 1755 aa0.23□□□□□ -2.37
TCA17YEL048C TY1B-ML1Q04711 1755 aaKnown RBP0.23□□□□□ -2.37
TCA17YEL048C TY1B-LR1Q12088 1755 aaKnown RBP0.23□□□□□ -2.37
TCA17YEL048C TY1B-GR2Q12269 1755 aa0.23□□□□□ -2.37
TCA17YEL048C SIP18P50263 79 aa0.22□□□□□ -2.37
TCA17YEL048C YOR008C-AQ3E7B9 74 aa0.22□□□□□ -2.37
TCA17YEL048C YMR001C-AQ8TGS9 76 aa0.22□□□□□ -2.37
TCA17YEL048C TY1B-DR3Q99231 1755 aa0.22□□□□□ -2.37
TCA17YEL048C SEN1Q00416 2231 aaKnown RBP0.21□□□□□ -2.38
TCA17YEL048C BPH1P25356 2167 aa0.21□□□□□ -2.38
TCA17YEL048C YBR200W-AQ3E755 54 aa0.21□□□□□ -2.38
TCA17YEL048C YOR032W-AQ8TGS1 66 aa0.21□□□□□ -2.38
TCA17YEL048C UTP10P42945 1769 aaKnown RBP0.21□□□□□ -2.38
TCA17YEL048C SSS1P35179 80 aa0.2□□□□□ -2.38
TCA17YEL048C YOR011W-AQ3E807 68 aa0.2□□□□□ -2.38
TCA17YEL048C YDR182W-AQ3E796 67 aa0.19□□□□□ -2.38
TCA17YEL048C YOR394C-AQ8TGJ0 55 aa0.19□□□□□ -2.38
TCA17YEL048C YBL039W-BP0C268 59 aa0.18□□□□□ -2.38
TCA17YEL048C RPS27AP35997 82 aaKnown RBP0.18□□□□□ -2.38
TCA17YEL048C RPS29AP41057 56 aaKnown RBP0.18□□□□□ -2.38
TCA17YEL048C HUB1Q6Q546 73 aa0.18□□□□□ -2.38
TCA17YEL048C TY1B-JR1P47098 1755 aa0.17□□□□□ -2.38
TCA17YEL048C TY1B-ML2Q03434 1755 aaKnown RBP0.17□□□□□ -2.38
TCA17YEL048C TY1B-ER1Q03612 1755 aa0.17□□□□□ -2.38
TCA17YEL048C TY1B-OLQ12273 1755 aa0.17□□□□□ -2.38
TCA17YEL048C TY2B-CP25384 1770 aa0.16□□□□□ -2.38
TCA17YEL048C TY2B-DR1Q12472 1770 aa0.16□□□□□ -2.38
TCA17YEL048C APC1P53886 1748 aa0.16□□□□□ -2.38
TCA17YEL048C PMD1P32634 1753 aa0.14□□□□□ -2.39
TCA17YEL048C SPI1P40092 148 aa0.13□□□□□ -2.39
TCA17YEL048C MLP1Q02455 1875 aaKnown RBP0.12□□□□□ -2.39
TCA17YEL048C KOG1P38873 1557 aa0.12□□□□□ -2.39
TCA17YEL048C IRC20Q06554 1556 aa0.12□□□□□ -2.39
TCA17YEL048C UFD4P33202 1483 aa0.11□□□□□ -2.39
TCA17YEL048C PAI3P01094 68 aa0.11□□□□□ -2.39
TCA17YEL048C YFL041W-AQ3E817 63 aa0.11□□□□□ -2.39
TCA17YEL048C ERI1P62651 68 aaKnown RBP0.1□□□□□ -2.39
TCA17YEL048C TOS6P48560 102 aa0.08□□□□□ -2.4
TCA17YEL048C NUP159P40477 1460 aa0.07□□□□□ -2.4
TCA17YEL048C TY2B-LR1P0C2J3 1770 aa0.06□□□□□ -2.4
TCA17YEL048C TY2B-FP0CX63 1770 aa0.06□□□□□ -2.4
TCA17YEL048C TY2B-GR2P0CX64 1770 aa0.06□□□□□ -2.4
TCA17YEL048C TY2B-DR2Q03494 1770 aa0.06□□□□□ -2.4
TCA17YEL048C TY2B-OR1Q12113 1770 aa0.06□□□□□ -2.4
TCA17YEL048C TY2B-BQ12491 1770 aa0.06□□□□□ -2.4
TCA17YEL048C TY2B-OR2Q12501 1770 aa0.06□□□□□ -2.4
TCA17YEL048C TY2B-DR3Q07791 1770 aaKnown RBP0.04□□□□□ -2.4
TCA17YEL048C VTH1P40438 1549 aa0.03□□□□□ -2.4
TCA17YEL048C VTH2P40890 1549 aa0.03□□□□□ -2.4
TCA17YEL048C UTP20P35194 2493 aaKnown RBP0.03□□□□□ -2.4
TCA17YEL048C YSY6P38374 65 aa0.02□□□□□ -2.41
TCA17YEL048C RPS30AP0CX33 63 aaKnown RBP0□□□□□ -2.41
TCA17YEL048C RPS30BP0CX34 63 aaKnown RBP0□□□□□ -2.41
TCA17YEL048C YOL131WQ08270 108 aa-0.01□□□□□ -2.41
TCA17YEL048C YBR230W-AQ3E762 66 aa-0.02□□□□□ -2.41
TCA17YEL048C IML1P47170 1584 aa-0.02□□□□□ -2.41
TCA17YEL048C TY3B-GQ99315 1547 aa-0.03□□□□□ -2.41
TCA17YEL048C COA2Q3E823 68 aa-0.04□□□□□ -2.42
TCA17YEL048C HAP1P0CE41 1502 aa-0.04□□□□□ -2.42
TCA17YEL048C IQG1Q12280 1495 aa-0.04□□□□□ -2.42
TCA17YEL048C DOP1Q03921 1698 aa-0.05□□□□□ -2.42
TCA17YEL048C YIL102C-AQ2V2P5 75 aa-0.07□□□□□ -2.42
TCA17YEL048C TY1B-NL2Q99337 1749 aaKnown RBP-0.07□□□□□ -2.42
TCA17YEL048C SCC2Q04002 1493 aa-0.08□□□□□ -2.42
TCA17YEL048C RPS27BP38711 82 aa-0.09□□□□□ -2.42
TCA17YEL048C DNF2Q12675 1612 aa-0.09□□□□□ -2.42
TCA17YEL048C ARO1P08566 1588 aaKnown RBP-0.1□□□□□ -2.42
TCA17YEL048C YLR157W-DP0CE99 70 aa-0.1□□□□□ -2.43
TCA17YEL048C RPO31P04051 1460 aa-0.1□□□□□ -2.43
TCA17YEL048C YGR146C-AQ8TGT9 53 aa-0.11□□□□□ -2.43
TCA17YEL048C RPO21P04050 1733 aaKnown RBP-0.13□□□□□ -2.43
TCA17YEL048C YDR524C-BQ3E6R4 66 aa-0.13□□□□□ -2.43
TCA17YEL048C VPS15P22219 1454 aa-0.14□□□□□ -2.43
TCA17YEL048C BCK1Q01389 1478 aa-0.15□□□□□ -2.43
TCA17YEL048C YLL006W-AQ3E814 58 aa-0.16□□□□□ -2.44
TCA17YEL048C TCB3Q03640 1545 aaKnown RBP-0.17□□□□□ -2.44
TCA17YEL048C YGL258W-AQ3E740 77 aa-0.17□□□□□ -2.44
TCA17YEL048C YOL166W-AQ8TGJ1 51 aa-0.17□□□□□ -2.44
TCA17YEL048C SPO14P36126 1683 aa-0.18□□□□□ -2.44
TCA17YEL048C TOR1P35169 2470 aa-0.18□□□□□ -2.44
TCA17YEL048C MYO4P32492 1471 aa-0.18□□□□□ -2.44
TCA17YEL048C PDR15Q04182 1529 aaKnown RBP-0.18□□□□□ -2.44
TCA17YEL048C YBR056W-AI2HB52 66 aa-0.23□□□□□ -2.45
TCA17YEL048C PDR12Q02785 1511 aa-0.24□□□□□ -2.45
TCA17YEL048C DNF1P32660 1571 aa-0.24□□□□□ -2.45
TCA17YEL048C YOR072W-BQ3E832 53 aa-0.25□□□□□ -2.45
TCA17YEL048C VMA9Q3E7B6 73 aa-0.27□□□□□ -2.45
TCA17YEL048C FKS3Q04952 1785 aa-0.27□□□□□ -2.45
TCA17YEL048C VMR1P38735 1592 aa-0.28□□□□□ -2.45
TCA17YEL048C RRP5Q05022 1729 aaKnown RBP-0.3□□□□□ -2.46
TCA17YEL048C YHR050W-AQ05451 56 aa-0.33□□□□□ -2.46
TCA17YEL048C YFR010W-AP0C5N0 62 aa-0.4□□□□□ -2.47
TCA17YEL048C YKL023C-AQ2V2P3 75 aa-0.41□□□□□ -2.48
TCA17YEL048C YOR192C-CQ3E736 78 aa-0.41□□□□□ -2.48
TCA17YEL048C SNQ2P32568 1501 aaKnown RBP-0.42□□□□□ -2.48
TCA17YEL048C YPR010C-AA5Z2X5 72 aa-0.49□□□□□ -2.49
TCA17YEL048C YCF1P39109 1515 aaKnown RBP-0.54□□□□□ -2.5
TCA17YEL048C TY1B-DR4Q07793 1604 aa-0.54□□□□□ -2.5
Retrieved 100 of 5,963 RNA–protein pairs in 23.5 ms