RNA–Protein interactions for RNA: YDR484W

VPS52, Transcript of Component of the GARP (Golgi-associated retrograde protein) complex, yeastyeast

Gene VPS52, Length 1,926 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS52YDR484W YOR343CQ12484 108 aa-0.17□□□□□ -2.44
VPS52YDR484W EDC1P53080 175 aaPredicted RBP-0.18□□□□□ -2.44
VPS52YDR484W YOR032W-AQ8TGS1 66 aa-0.18□□□□□ -2.44
VPS52YDR484W YBR032WP38223 100 aa-0.19□□□□□ -2.44
VPS52YDR484W YKL018C-AQ3E7A7 99 aa-0.19□□□□□ -2.44
VPS52YDR484W MLP1Q02455 1875 aaKnown RBP-0.19□□□□□ -2.44
VPS52YDR484W YGR025WP53216 100 aa-0.19□□□□□ -2.44
VPS52YDR484W RPS27AP35997 82 aaKnown RBP-0.2□□□□□ -2.44
VPS52YDR484W MMS1Q06211 1407 aa-0.2□□□□□ -2.44
VPS52YDR484W YGR121W-AQ3E816 71 aa-0.21□□□□□ -2.44
VPS52YDR484W LTE1P07866 1435 aa-0.21□□□□□ -2.44
VPS52YDR484W YOL097W-AQ3E7Y9 61 aa-0.21□□□□□ -2.44
VPS52YDR484W TOR1P35169 2470 aa-0.21□□□□□ -2.44
VPS52YDR484W APC1P53886 1748 aa-0.22□□□□□ -2.44
VPS52YDR484W TIM12P32830 109 aa-0.22□□□□□ -2.44
VPS52YDR484W SMC4Q12267 1418 aa-0.22□□□□□ -2.44
VPS52YDR484W YOR314WQ12506 109 aa-0.23□□□□□ -2.45
VPS52YDR484W YLR146W-AQ2V2P1 62 aa-0.23□□□□□ -2.45
VPS52YDR484W SPO14P36126 1683 aa-0.23□□□□□ -2.45
VPS52YDR484W MMS22Q06164 1454 aa-0.23□□□□□ -2.45
VPS52YDR484W SIP18P50263 79 aa-0.23□□□□□ -2.45
VPS52YDR484W YMR001C-AQ8TGS9 76 aa-0.23□□□□□ -2.45
VPS52YDR484W IRC20Q06554 1556 aa-0.24□□□□□ -2.45
VPS52YDR484W QCR9P22289 66 aa-0.24□□□□□ -2.45
VPS52YDR484W YGR035W-AQ45U48 73 aa-0.24□□□□□ -2.45
VPS52YDR484W YKL065W-AQ2V2P2 73 aa-0.25□□□□□ -2.45
VPS52YDR484W YDR182W-AQ3E796 67 aa-0.25□□□□□ -2.45
VPS52YDR484W VTH1P40438 1549 aa-0.25□□□□□ -2.45
VPS52YDR484W VTH2P40890 1549 aa-0.25□□□□□ -2.45
VPS52YDR484W SWM2P40342 146 aa-0.25□□□□□ -2.45
VPS52YDR484W ATP17Q06405 101 aa-0.25□□□□□ -2.45
VPS52YDR484W YBR200W-AQ3E755 54 aa-0.25□□□□□ -2.45
VPS52YDR484W YKL068W-AQ3E826 78 aa-0.26□□□□□ -2.45
VPS52YDR484W FKS3Q04952 1785 aa-0.26□□□□□ -2.45
VPS52YDR484W RPS29AP41057 56 aaKnown RBP-0.26□□□□□ -2.45
VPS52YDR484W YOR394C-AQ8TGJ0 55 aa-0.26□□□□□ -2.45
VPS52YDR484W YBL039W-BP0C268 59 aa-0.27□□□□□ -2.45
VPS52YDR484W OLI1P61829 76 aa-0.27□□□□□ -2.45
VPS52YDR484W TY1B-NL2Q99337 1749 aaKnown RBP-0.27□□□□□ -2.45
VPS52YDR484W SSS1P35179 80 aa-0.28□□□□□ -2.45
VPS52YDR484W YDR119W-AQ2V2P9 66 aa-0.28□□□□□ -2.45
VPS52YDR484W RPO21P04050 1733 aaKnown RBP-0.28□□□□□ -2.45
VPS52YDR484W KOG1P38873 1557 aa-0.28□□□□□ -2.45
VPS52YDR484W HAP1P0CE41 1502 aa-0.29□□□□□ -2.46
VPS52YDR484W TOS6P48560 102 aa-0.29□□□□□ -2.46
VPS52YDR484W PAU7P39545 55 aa-0.3□□□□□ -2.46
VPS52YDR484W ERI1P62651 68 aaKnown RBP-0.3□□□□□ -2.46
VPS52YDR484W YOR008C-AQ3E7B9 74 aa-0.3□□□□□ -2.46
VPS52YDR484W ESP1Q03018 1630 aa-0.3□□□□□ -2.46
VPS52YDR484W TY3B-GQ99315 1547 aa-0.3□□□□□ -2.46
VPS52YDR484W LSM2P38203 95 aaKnown RBP-0.3□□□□□ -2.46
VPS52YDR484W SKI3P17883 1432 aaKnown RBP-0.31□□□□□ -2.46
VPS52YDR484W ARO1P08566 1588 aaKnown RBP-0.31□□□□□ -2.46
VPS52YDR484W DNF2Q12675 1612 aa-0.32□□□□□ -2.46
VPS52YDR484W RPS27BP38711 82 aa-0.32□□□□□ -2.46
VPS52YDR484W YOR011W-AQ3E807 68 aa-0.32□□□□□ -2.46
VPS52YDR484W DOP1Q03921 1698 aa-0.32□□□□□ -2.46
VPS52YDR484W FMP27Q06179 2628 aa-0.32□□□□□ -2.46
VPS52YDR484W UFD4P33202 1483 aa-0.33□□□□□ -2.46
VPS52YDR484W RRP5Q05022 1729 aaKnown RBP-0.34□□□□□ -2.46
VPS52YDR484W RPS30AP0CX33 63 aaKnown RBP-0.34□□□□□ -2.46
VPS52YDR484W RPS30BP0CX34 63 aaKnown RBP-0.34□□□□□ -2.46
VPS52YDR484W YLL006W-AQ3E814 58 aa-0.34□□□□□ -2.46
VPS52YDR484W YHR213W-AQ8TGT4 77 aa-0.34□□□□□ -2.46
VPS52YDR484W YPR117WQ06116 2489 aa-0.34□□□□□ -2.46
VPS52YDR484W TOR2P32600 2474 aaKnown RBP-0.35□□□□□ -2.47
VPS52YDR484W IQG1Q12280 1495 aa-0.35□□□□□ -2.47
VPS52YDR484W NUP159P40477 1460 aa-0.36□□□□□ -2.47
VPS52YDR484W SPI1P40092 148 aa-0.37□□□□□ -2.47
VPS52YDR484W MEC1P38111 2368 aa-0.37□□□□□ -2.47
VPS52YDR484W DNF1P32660 1571 aa-0.38□□□□□ -2.47
VPS52YDR484W HUB1Q6Q546 73 aa-0.38□□□□□ -2.47
VPS52YDR484W IML1P47170 1584 aa-0.38□□□□□ -2.47
VPS52YDR484W TEL1P38110 2787 aa-0.38□□□□□ -2.47
VPS52YDR484W YOL131WQ08270 108 aa-0.38□□□□□ -2.47
VPS52YDR484W YFL041W-AQ3E817 63 aa-0.39□□□□□ -2.47
VPS52YDR484W RPO31P04051 1460 aa-0.4□□□□□ -2.47
VPS52YDR484W YLR157W-DP0CE99 70 aa-0.4□□□□□ -2.47
VPS52YDR484W YHR050W-AQ05451 56 aa-0.4□□□□□ -2.47
VPS52YDR484W YGR146C-AQ8TGT9 53 aa-0.4□□□□□ -2.47
VPS52YDR484W PAI3P01094 68 aa-0.4□□□□□ -2.47
VPS52YDR484W TCB3Q03640 1545 aaKnown RBP-0.4□□□□□ -2.47
VPS52YDR484W SCC2Q04002 1493 aa-0.41□□□□□ -2.47
VPS52YDR484W YSY6P38374 65 aa-0.41□□□□□ -2.48
VPS52YDR484W YGL258W-AQ3E740 77 aa-0.42□□□□□ -2.48
VPS52YDR484W DYN1P36022 4092 aa-0.42□□□□□ -2.48
VPS52YDR484W YOL166W-AQ8TGJ1 51 aa-0.42□□□□□ -2.48
VPS52YDR484W PDR15Q04182 1529 aaKnown RBP-0.43□□□□□ -2.48
VPS52YDR484W YBR230W-AQ3E762 66 aa-0.44□□□□□ -2.48
VPS52YDR484W VMR1P38735 1592 aa-0.45□□□□□ -2.48
VPS52YDR484W YIL102C-AQ2V2P5 75 aa-0.45□□□□□ -2.48
VPS52YDR484W PDR12Q02785 1511 aa-0.45□□□□□ -2.48
VPS52YDR484W YOR192C-CQ3E736 78 aa-0.46□□□□□ -2.48
VPS52YDR484W VPS15P22219 1454 aa-0.46□□□□□ -2.48
VPS52YDR484W YDR524C-BQ3E6R4 66 aa-0.46□□□□□ -2.48
VPS52YDR484W TRA1P38811 3744 aa-0.47□□□□□ -2.49
VPS52YDR484W MYO4P32492 1471 aa-0.48□□□□□ -2.49
VPS52YDR484W YOR072W-BQ3E832 53 aa-0.48□□□□□ -2.49
VPS52YDR484W SNQ2P32568 1501 aaKnown RBP-0.48□□□□□ -2.49
VPS52YDR484W COA2Q3E823 68 aa-0.5□□□□□ -2.49
Retrieved 100 of 5,963 RNA–protein pairs in 62.5 ms