RNA–Protein interactions for RNA: YBR009C

HHF1, Transcript of Histone H4, yeastyeast

Gene HHF1, Length 312 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
HHF1YBR009C COX7P10174 60 aa1.48□□□□□ -2.17
HHF1YBR009C RPL37AP49166 88 aaKnown RBP1.48□□□□□ -2.17
HHF1YBR009C YBR072C-AQ3E794 53 aa1.48□□□□□ -2.17
HHF1YBR009C RIM15P43565 1770 aa1.47□□□□□ -2.17
HHF1YBR009C TY2B-DR3Q07791 1770 aaKnown RBP1.47□□□□□ -2.17
HHF1YBR009C PDR12Q02785 1511 aa1.47□□□□□ -2.17
HHF1YBR009C SPI1P40092 148 aa1.47□□□□□ -2.17
HHF1YBR009C ERI1P62651 68 aaKnown RBP1.47□□□□□ -2.17
HHF1YBR009C SGF11Q03067 99 aa1.47□□□□□ -2.17
HHF1YBR009C RPL43AP0CX25 92 aaKnown RBP1.46□□□□□ -2.18
HHF1YBR009C RPL43BP0CX26 92 aa1.46□□□□□ -2.18
HHF1YBR009C YOR032W-AQ8TGS1 66 aa1.46□□□□□ -2.18
HHF1YBR009C TY1B-DR4Q07793 1604 aa1.46□□□□□ -2.18
HHF1YBR009C IML1P47170 1584 aa1.46□□□□□ -2.18
HHF1YBR009C IQG1Q12280 1495 aa1.45□□□□□ -2.18
HHF1YBR009C PAU7P39545 55 aa1.45□□□□□ -2.18
HHF1YBR009C RPC10P40422 70 aa1.45□□□□□ -2.18
HHF1YBR009C YKL018C-AQ3E7A7 99 aa1.45□□□□□ -2.18
HHF1YBR009C URA2P07259 2214 aaKnown RBP1.45□□□□□ -2.18
HHF1YBR009C ARO1P08566 1588 aaKnown RBP1.45□□□□□ -2.18
HHF1YBR009C YDR246W-AQ3E763 66 aa1.44□□□□□ -2.18
HHF1YBR009C BLM10P43583 2143 aa1.43□□□□□ -2.18
HHF1YBR009C RPL38P49167 78 aaKnown RBP1.43□□□□□ -2.18
HHF1YBR009C ATP17Q06405 101 aa1.43□□□□□ -2.18
HHF1YBR009C VMA9Q3E7B6 73 aa1.43□□□□□ -2.18
HHF1YBR009C YOL097W-AQ3E7Y9 61 aa1.43□□□□□ -2.18
HHF1YBR009C MON2P48563 1636 aaPredicted RBP1.43□□□□□ -2.18
HHF1YBR009C DNF2Q12675 1612 aa1.43□□□□□ -2.18
HHF1YBR009C YIL102C-AQ2V2P5 75 aa1.42□□□□□ -2.18
HHF1YBR009C BPH1P25356 2167 aa1.41□□□□□ -2.18
HHF1YBR009C APC1P53886 1748 aa1.41□□□□□ -2.18
HHF1YBR009C YSY6P38374 65 aa1.41□□□□□ -2.18
HHF1YBR009C SDH6Q3E785 79 aa1.41□□□□□ -2.18
HHF1YBR009C RPO21P04050 1733 aaKnown RBP1.4□□□□□ -2.18
HHF1YBR009C YLR157W-EP0CF00 54 aa1.4□□□□□ -2.19
HHF1YBR009C YNL190WP53872 204 aa1.4□□□□□ -2.19
HHF1YBR009C YLR307C-AQ3E825 87 aa1.4□□□□□ -2.19
HHF1YBR009C YIL134C-AQ45U18 67 aa1.4□□□□□ -2.19
HHF1YBR009C YPR108W-AQ3E7B3 70 aa1.39□□□□□ -2.19
HHF1YBR009C YJR107C-AP0CT86 78 aa1.37□□□□□ -2.19
HHF1YBR009C TY3B-GQ99315 1547 aa1.36□□□□□ -2.19
HHF1YBR009C SPO14P36126 1683 aa1.36□□□□□ -2.19
HHF1YBR009C HKR1P41809 1802 aa1.36□□□□□ -2.19
HHF1YBR009C KOG1P38873 1557 aa1.35□□□□□ -2.19
HHF1YBR009C RPL37BP51402 88 aaKnown RBP1.35□□□□□ -2.19
HHF1YBR009C PDR5P33302 1511 aaKnown RBP1.35□□□□□ -2.19
HHF1YBR009C BCK1Q01389 1478 aa1.34□□□□□ -2.19
HHF1YBR009C YBR032WP38223 100 aa1.33□□□□□ -2.2
HHF1YBR009C YDR182W-AQ3E796 67 aa1.33□□□□□ -2.2
HHF1YBR009C YOL164W-AQ3E7A5 60 aa1.33□□□□□ -2.2
HHF1YBR009C YCF1P39109 1515 aaKnown RBP1.33□□□□□ -2.2
HHF1YBR009C MMS1Q06211 1407 aa1.32□□□□□ -2.2
HHF1YBR009C VTH1P40438 1549 aa1.32□□□□□ -2.2
HHF1YBR009C VTH2P40890 1549 aa1.32□□□□□ -2.2
HHF1YBR009C RPS30AP0CX33 63 aaKnown RBP1.32□□□□□ -2.2
HHF1YBR009C RPS30BP0CX34 63 aaKnown RBP1.32□□□□□ -2.2
HHF1YBR009C HUB1Q6Q546 73 aa1.32□□□□□ -2.2
HHF1YBR009C CDC25P04821 1589 aa1.31□□□□□ -2.2
HHF1YBR009C SPT6P23615 1451 aaKnown RBP1.31□□□□□ -2.2
HHF1YBR009C SNQ2P32568 1501 aaKnown RBP1.3□□□□□ -2.2
HHF1YBR009C VMR1P38735 1592 aa1.3□□□□□ -2.2
HHF1YBR009C EDC1P53080 175 aaPredicted RBP1.29□□□□□ -2.2
HHF1YBR009C YLR146W-AQ2V2P1 62 aa1.29□□□□□ -2.2
HHF1YBR009C SNF2P22082 1703 aa1.29□□□□□ -2.2
HHF1YBR009C HAP1P0CE41 1502 aa1.26□□□□□ -2.21
HHF1YBR009C YBL039W-BP0C268 59 aa1.26□□□□□ -2.21
HHF1YBR009C YBR200W-AQ3E755 54 aa1.26□□□□□ -2.21
HHF1YBR009C YOL166W-AQ8TGJ1 51 aa1.26□□□□□ -2.21
HHF1YBR009C YKL023C-AQ2V2P3 75 aa1.25□□□□□ -2.21
HHF1YBR009C YBT1P32386 1661 aa1.25□□□□□ -2.21
HHF1YBR009C THO2P53552 1597 aaKnown RBP1.24□□□□□ -2.21
HHF1YBR009C IRC20Q06554 1556 aa1.23□□□□□ -2.21
HHF1YBR009C YBR016WP38216 128 aa1.23□□□□□ -2.21
HHF1YBR009C YOR011W-AQ3E807 68 aa1.23□□□□□ -2.21
HHF1YBR009C YFR009W-AP0C5M9 85 aa1.22□□□□□ -2.21
HHF1YBR009C RPS27AP35997 82 aaKnown RBP1.21□□□□□ -2.22
HHF1YBR009C YOR394C-AQ8TGJ0 55 aa1.21□□□□□ -2.22
HHF1YBR009C PDR15Q04182 1529 aaKnown RBP1.2□□□□□ -2.22
HHF1YBR009C NUP188P52593 1655 aaKnown RBP1.2□□□□□ -2.22
HHF1YBR009C HIR3P47171 1648 aa1.2□□□□□ -2.22
HHF1YBR009C YOR093CQ12275 1648 aa1.2□□□□□ -2.22
HHF1YBR009C PEP1P32319 1579 aa1.19□□□□□ -2.22
HHF1YBR009C SSK2P53599 1579 aa1.18□□□□□ -2.22
HHF1YBR009C YOR192C-CQ3E736 78 aa1.18□□□□□ -2.22
HHF1YBR009C YMR001C-AQ8TGS9 76 aa1.18□□□□□ -2.22
HHF1YBR009C OLI1P61829 76 aa1.17□□□□□ -2.22
HHF1YBR009C ATG2P53855 1592 aa1.17□□□□□ -2.22
HHF1YBR009C YLR157W-DP0CE99 70 aa1.16□□□□□ -2.22
HHF1YBR009C ULS1Q08562 1619 aa1.15□□□□□ -2.22
HHF1YBR009C USO1P25386 1790 aa1.13□□□□□ -2.23
HHF1YBR009C RKR1Q04781 1562 aa1.13□□□□□ -2.23
HHF1YBR009C YBL044WP38194 122 aa1.13□□□□□ -2.23
HHF1YBR009C RPS29BP41058 56 aaKnown RBP1.12□□□□□ -2.23
HHF1YBR009C YGR025WP53216 100 aa1.11□□□□□ -2.23
HHF1YBR009C NUP170P38181 1502 aa1.08□□□□□ -2.24
HHF1YBR009C BUD3P25558 1636 aa1.05□□□□□ -2.24
HHF1YBR009C NUP192P47054 1683 aa1.05□□□□□ -2.24
HHF1YBR009C RPS27BP38711 82 aa1.05□□□□□ -2.24
HHF1YBR009C SIP18P50263 79 aa1.05□□□□□ -2.24
HHF1YBR009C PRP8P33334 2413 aaKnown RBP1.05□□□□□ -2.24
Retrieved 100 of 5,963 RNA–protein pairs in 97.3 ms