RNA–Protein interactions for RNA: YBL103C

RTG3, Transcript of bHLH/Zip transcription factor for retrograde (RTG) and TOR pathways, yeastyeast

Gene RTG3, Length 1,461 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RTG3YBL103C EDC1P53080 175 aaPredicted RBP0.77□□□□□ -2.29
RTG3YBL103C ATP17Q06405 101 aa0.77□□□□□ -2.29
RTG3YBL103C ATX1P38636 73 aa0.76□□□□□ -2.29
RTG3YBL103C SPI1P40092 148 aa0.76□□□□□ -2.29
RTG3YBL103C YPR117WQ06116 2489 aa0.75□□□□□ -2.29
RTG3YBL103C YFR009W-AP0C5M9 85 aa0.75□□□□□ -2.29
RTG3YBL103C SCC2Q04002 1493 aa0.75□□□□□ -2.29
RTG3YBL103C TCB3Q03640 1545 aaKnown RBP0.74□□□□□ -2.29
RTG3YBL103C YOR032W-AQ8TGS1 66 aa0.74□□□□□ -2.29
RTG3YBL103C BLM10P43583 2143 aa0.74□□□□□ -2.29
RTG3YBL103C TY1B-JR1P47098 1755 aa0.74□□□□□ -2.29
RTG3YBL103C TY1B-ML2Q03434 1755 aaKnown RBP0.74□□□□□ -2.29
RTG3YBL103C TY1B-ER1Q03612 1755 aa0.74□□□□□ -2.29
RTG3YBL103C TY1B-OLQ12273 1755 aa0.74□□□□□ -2.29
RTG3YBL103C HKR1P41809 1802 aa0.74□□□□□ -2.29
RTG3YBL103C PRP8P33334 2413 aaKnown RBP0.74□□□□□ -2.29
RTG3YBL103C SSS1P35179 80 aa0.73□□□□□ -2.29
RTG3YBL103C PAU7P39545 55 aa0.73□□□□□ -2.29
RTG3YBL103C TY2B-LR1P0C2J3 1770 aa0.73□□□□□ -2.29
RTG3YBL103C TY2B-FP0CX63 1770 aa0.73□□□□□ -2.29
RTG3YBL103C TY2B-GR2P0CX64 1770 aa0.73□□□□□ -2.29
RTG3YBL103C TY2B-DR2Q03494 1770 aa0.73□□□□□ -2.29
RTG3YBL103C TY2B-OR1Q12113 1770 aa0.73□□□□□ -2.29
RTG3YBL103C TY2B-BQ12491 1770 aa0.73□□□□□ -2.29
RTG3YBL103C TY2B-OR2Q12501 1770 aa0.73□□□□□ -2.29
RTG3YBL103C CUP1-1P0CX80 61 aa0.73□□□□□ -2.29
RTG3YBL103C CUP1-2P0CX81 61 aa0.73□□□□□ -2.29
RTG3YBL103C ERI1P62651 68 aaKnown RBP0.73□□□□□ -2.29
RTG3YBL103C YKL018C-AQ3E7A7 99 aa0.73□□□□□ -2.29
RTG3YBL103C TY2B-DR3Q07791 1770 aaKnown RBP0.71□□□□□ -2.3
RTG3YBL103C PMD1P32634 1753 aa0.71□□□□□ -2.3
RTG3YBL103C TOM1Q03280 3268 aa0.7□□□□□ -2.3
RTG3YBL103C YDR246W-AQ3E763 66 aa0.7□□□□□ -2.3
RTG3YBL103C APC1P53886 1748 aa0.7□□□□□ -2.3
RTG3YBL103C VPS15P22219 1454 aa0.69□□□□□ -2.3
RTG3YBL103C DNF1P32660 1571 aa0.69□□□□□ -2.3
RTG3YBL103C YIL134C-AQ45U18 67 aa0.69□□□□□ -2.3
RTG3YBL103C ARO1P08566 1588 aaKnown RBP0.69□□□□□ -2.3
RTG3YBL103C IML1P47170 1584 aa0.69□□□□□ -2.3
RTG3YBL103C YGR025WP53216 100 aa0.67□□□□□ -2.3
RTG3YBL103C BPH1P25356 2167 aa0.67□□□□□ -2.3
RTG3YBL103C RPO31P04051 1460 aa0.67□□□□□ -2.3
RTG3YBL103C VPS13Q07878 3144 aa0.66□□□□□ -2.3
RTG3YBL103C MYO4P32492 1471 aa0.66□□□□□ -2.3
RTG3YBL103C IQG1Q12280 1495 aa0.66□□□□□ -2.3
RTG3YBL103C SMC4Q12267 1418 aa0.66□□□□□ -2.3
RTG3YBL103C HUB1Q6Q546 73 aa0.66□□□□□ -2.3
RTG3YBL103C YSY6P38374 65 aa0.65□□□□□ -2.31
RTG3YBL103C YLR146W-AQ2V2P1 62 aa0.65□□□□□ -2.31
RTG3YBL103C DNF2Q12675 1612 aa0.64□□□□□ -2.31
RTG3YBL103C KOG1P38873 1557 aa0.64□□□□□ -2.31
RTG3YBL103C TOR1P35169 2470 aa0.64□□□□□ -2.31
RTG3YBL103C RPS27AP35997 82 aaKnown RBP0.64□□□□□ -2.31
RTG3YBL103C YBL044WP38194 122 aa0.64□□□□□ -2.31
RTG3YBL103C YOL131WQ08270 108 aa0.64□□□□□ -2.31
RTG3YBL103C YBR200W-AQ3E755 54 aa0.64□□□□□ -2.31
RTG3YBL103C YDR182W-AQ3E796 67 aa0.63□□□□□ -2.31
RTG3YBL103C YOR011W-AQ3E807 68 aa0.63□□□□□ -2.31
RTG3YBL103C IRC20Q06554 1556 aa0.62□□□□□ -2.31
RTG3YBL103C YBL039W-BP0C268 59 aa0.62□□□□□ -2.31
RTG3YBL103C YIL102C-AQ2V2P5 75 aa0.62□□□□□ -2.31
RTG3YBL103C YOR394C-AQ8TGJ0 55 aa0.61□□□□□ -2.31
RTG3YBL103C RRP5Q05022 1729 aaKnown RBP0.61□□□□□ -2.31
RTG3YBL103C BCK1Q01389 1478 aa0.61□□□□□ -2.31
RTG3YBL103C MMS1Q06211 1407 aa0.61□□□□□ -2.31
RTG3YBL103C FMP27Q06179 2628 aa0.61□□□□□ -2.31
RTG3YBL103C YFR010W-AP0C5N0 62 aa0.61□□□□□ -2.31
RTG3YBL103C RPS30AP0CX33 63 aaKnown RBP0.61□□□□□ -2.31
RTG3YBL103C RPS30BP0CX34 63 aaKnown RBP0.61□□□□□ -2.31
RTG3YBL103C FKS3Q04952 1785 aa0.6□□□□□ -2.31
RTG3YBL103C GCN1P33892 2672 aaKnown RBP0.59□□□□□ -2.31
RTG3YBL103C PDR12Q02785 1511 aa0.59□□□□□ -2.31
RTG3YBL103C OLI1P61829 76 aa0.59□□□□□ -2.32
RTG3YBL103C TY3B-GQ99315 1547 aa0.59□□□□□ -2.32
RTG3YBL103C IRA1P18963 3092 aa0.58□□□□□ -2.32
RTG3YBL103C VMA9Q3E7B6 73 aa0.58□□□□□ -2.32
RTG3YBL103C IRA2P19158 3079 aa0.57□□□□□ -2.32
RTG3YBL103C YOL166W-AQ8TGJ1 51 aa0.56□□□□□ -2.32
RTG3YBL103C UTP20P35194 2493 aaKnown RBP0.55□□□□□ -2.32
RTG3YBL103C HIR3P47171 1648 aa0.55□□□□□ -2.32
RTG3YBL103C HAP1P0CE41 1502 aa0.55□□□□□ -2.32
RTG3YBL103C VMR1P38735 1592 aa0.55□□□□□ -2.32
RTG3YBL103C YCR108CQ3E819 63 aa0.54□□□□□ -2.32
RTG3YBL103C MDN1Q12019 4910 aaKnown RBP0.54□□□□□ -2.32
RTG3YBL103C YOR093CQ12275 1648 aa0.54□□□□□ -2.32
RTG3YBL103C TEL1P38110 2787 aa0.52□□□□□ -2.33
RTG3YBL103C SEN1Q00416 2231 aaKnown RBP0.52□□□□□ -2.33
RTG3YBL103C YMR001C-AQ8TGS9 76 aa0.52□□□□□ -2.33
RTG3YBL103C RPO21P04050 1733 aaKnown RBP0.51□□□□□ -2.33
RTG3YBL103C PDR15Q04182 1529 aaKnown RBP0.5□□□□□ -2.33
RTG3YBL103C TAO3P40468 2376 aa0.5□□□□□ -2.33
RTG3YBL103C VTH1P40438 1549 aa0.48□□□□□ -2.33
RTG3YBL103C VTH2P40890 1549 aa0.48□□□□□ -2.33
RTG3YBL103C SIP18P50263 79 aa0.48□□□□□ -2.33
RTG3YBL103C YLR157W-DP0CE99 70 aa0.48□□□□□ -2.33
RTG3YBL103C RPS27BP38711 82 aa0.47□□□□□ -2.33
RTG3YBL103C CDC25P04821 1589 aa0.46□□□□□ -2.34
RTG3YBL103C YKL023C-AQ2V2P3 75 aa0.46□□□□□ -2.34
RTG3YBL103C YBR230W-AQ3E762 66 aa0.46□□□□□ -2.34
RTG3YBL103C YOR008C-AQ3E7B9 74 aa0.46□□□□□ -2.34
Retrieved 100 of 5,963 RNA–protein pairs in 18.3 ms