RNA–Protein interactions for RNA: NME1

NME1, Transcript of RNA component of RNase MRP, yeastyeast

Gene NME1, Length 340 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NME1NME1 MMS22Q06164 1454 aa-0.16□□□□□ -2.44
NME1NME1 TOR2P32600 2474 aaKnown RBP-0.17□□□□□ -2.44
NME1NME1 YPR117WQ06116 2489 aa-0.19□□□□□ -2.44
NME1NME1 GCN1P33892 2672 aaKnown RBP-0.19□□□□□ -2.44
NME1NME1 DYN1P36022 4092 aa-0.19□□□□□ -2.44
NME1NME1 TOR1P35169 2470 aa-0.2□□□□□ -2.44
NME1NME1 NUM1Q00402 2748 aa-0.21□□□□□ -2.44
NME1NME1 CSF1Q12150 2958 aa-0.21□□□□□ -2.44
NME1NME1 MEC1P38111 2368 aa-0.24□□□□□ -2.45
NME1NME1 TEL1P38110 2787 aa-0.24□□□□□ -2.45
NME1NME1 UTP20P35194 2493 aaKnown RBP-0.25□□□□□ -2.45
NME1NME1 SIN3P22579 1536 aa-0.26□□□□□ -2.45
NME1NME1 RPS29AP41057 56 aaKnown RBP-0.28□□□□□ -2.45
NME1NME1 APC1P53886 1748 aa-0.29□□□□□ -2.46
NME1NME1 IRA1P18963 3092 aa-0.29□□□□□ -2.46
NME1NME1 TY2B-CP25384 1770 aa-0.3□□□□□ -2.46
NME1NME1 TY2B-DR1Q12472 1770 aa-0.3□□□□□ -2.46
NME1NME1 IRA2P19158 3079 aa-0.3□□□□□ -2.46
NME1NME1 SKI3P17883 1432 aaKnown RBP-0.32□□□□□ -2.46
NME1NME1 ESP1Q03018 1630 aa-0.33□□□□□ -2.46
NME1NME1 MLP1Q02455 1875 aaKnown RBP-0.33□□□□□ -2.46
NME1NME1 TRA1P38811 3744 aa-0.35□□□□□ -2.46
NME1NME1 RPO21P04050 1733 aaKnown RBP-0.35□□□□□ -2.47
NME1NME1 SWM2P40342 146 aa-0.35□□□□□ -2.47
NME1NME1 YGR121W-AQ3E816 71 aa-0.35□□□□□ -2.47
NME1NME1 QCR9P22289 66 aa-0.36□□□□□ -2.47
NME1NME1 TOM1Q03280 3268 aa-0.36□□□□□ -2.47
NME1NME1 VPS13Q07878 3144 aa-0.38□□□□□ -2.47
NME1NME1 YHR050W-AQ05451 56 aa-0.38□□□□□ -2.47
NME1NME1 CUP1-1P0CX80 61 aa-0.39□□□□□ -2.47
NME1NME1 CUP1-2P0CX81 61 aa-0.39□□□□□ -2.47
NME1NME1 ATP17Q06405 101 aa-0.39□□□□□ -2.47
NME1NME1 SMC4Q12267 1418 aa-0.42□□□□□ -2.48
NME1NME1 YMR105W-AQ8TGS8 64 aa-0.46□□□□□ -2.48
NME1NME1 TY1B-NL2Q99337 1749 aaKnown RBP-0.48□□□□□ -2.49
NME1NME1 TY2B-LR1P0C2J3 1770 aa-0.49□□□□□ -2.49
NME1NME1 TY2B-FP0CX63 1770 aa-0.49□□□□□ -2.49
NME1NME1 TY2B-GR2P0CX64 1770 aa-0.49□□□□□ -2.49
NME1NME1 TY2B-DR2Q03494 1770 aa-0.49□□□□□ -2.49
NME1NME1 TY2B-DR3Q07791 1770 aaKnown RBP-0.49□□□□□ -2.49
NME1NME1 TY2B-OR1Q12113 1770 aa-0.49□□□□□ -2.49
NME1NME1 TY2B-BQ12491 1770 aa-0.49□□□□□ -2.49
NME1NME1 TY2B-OR2Q12501 1770 aa-0.49□□□□□ -2.49
NME1NME1 LSM2P38203 95 aaKnown RBP-0.49□□□□□ -2.49
NME1NME1 TY1B-DR4Q07793 1604 aa-0.49□□□□□ -2.49
NME1NME1 RPS27AP35997 82 aaKnown RBP-0.5□□□□□ -2.49
NME1NME1 YLR146W-AQ2V2P1 62 aa-0.5□□□□□ -2.49
NME1NME1 YGR035W-AQ45U48 73 aa-0.5□□□□□ -2.49
NME1NME1 SPO14P36126 1683 aa-0.51□□□□□ -2.49
NME1NME1 YMR001C-AQ8TGS9 76 aa-0.51□□□□□ -2.49
NME1NME1 Q0017Q9ZZX8 53 aa-0.51□□□□□ -2.49
NME1NME1 HAP1P0CE41 1502 aa-0.52□□□□□ -2.49
NME1NME1 THO2P53552 1597 aaKnown RBP-0.53□□□□□ -2.49
NME1NME1 YOR072W-BQ3E832 53 aa-0.53□□□□□ -2.49
NME1NME1 FIG2P25653 1609 aa-0.53□□□□□ -2.49
NME1NME1 BCK1Q01389 1478 aa-0.54□□□□□ -2.5
NME1NME1 OLI1P61829 76 aa-0.54□□□□□ -2.5
NME1NME1 YOR192C-CQ3E736 78 aa-0.55□□□□□ -2.5
NME1NME1 YML054C-AQ3E809 52 aa-0.55□□□□□ -2.5
NME1NME1 SSK2P53599 1579 aa-0.55□□□□□ -2.5
NME1NME1 ULS1Q08562 1619 aa-0.56□□□□□ -2.5
NME1NME1 YDR119W-AQ2V2P9 66 aa-0.57□□□□□ -2.5
NME1NME1 YKL018C-AQ3E7A7 99 aa-0.57□□□□□ -2.5
NME1NME1 YOR093CQ12275 1648 aa-0.57□□□□□ -2.5
NME1NME1 DNF2Q12675 1612 aa-0.57□□□□□ -2.5
NME1NME1 IRC20Q06554 1556 aa-0.57□□□□□ -2.5
NME1NME1 FLO1P32768 1537 aa-0.58□□□□□ -2.5
NME1NME1 YBT1P32386 1661 aa-0.58□□□□□ -2.5
NME1NME1 YDR182W-AQ3E796 67 aa-0.58□□□□□ -2.5
NME1NME1 COA2Q3E823 68 aa-0.58□□□□□ -2.5
NME1NME1 FKS3Q04952 1785 aa-0.58□□□□□ -2.5
NME1NME1 SNQ2P32568 1501 aaKnown RBP-0.59□□□□□ -2.5
NME1NME1 VTH1P40438 1549 aa-0.59□□□□□ -2.5
NME1NME1 VTH2P40890 1549 aa-0.59□□□□□ -2.5
NME1NME1 NUP192P47054 1683 aa-0.59□□□□□ -2.5
NME1NME1 RPO31P04051 1460 aa-0.59□□□□□ -2.5
NME1NME1 YHR073W-AP0C5N7 58 aa-0.59□□□□□ -2.5
NME1NME1 YDR524C-BQ3E6R4 66 aa-0.59□□□□□ -2.5
NME1NME1 YGL258W-AQ3E740 77 aa-0.59□□□□□ -2.5
NME1NME1 YOR008C-AQ3E7B9 74 aa-0.59□□□□□ -2.5
NME1NME1 CDC25P04821 1589 aa-0.59□□□□□ -2.5
NME1NME1 VPS15P22219 1454 aa-0.6□□□□□ -2.5
NME1NME1 RKR1Q04781 1562 aa-0.61□□□□□ -2.51
NME1NME1 GCN2P15442 1659 aa-0.61□□□□□ -2.51
NME1NME1 TOS6P48560 102 aa-0.61□□□□□ -2.51
NME1NME1 YLL006W-AQ3E814 58 aa-0.61□□□□□ -2.51
NME1NME1 PDR5P33302 1511 aaKnown RBP-0.61□□□□□ -2.51
NME1NME1 PDR12Q02785 1511 aa-0.61□□□□□ -2.51
NME1NME1 TCB3Q03640 1545 aaKnown RBP-0.61□□□□□ -2.51
NME1NME1 ARO1P08566 1588 aaKnown RBP-0.62□□□□□ -2.51
NME1NME1 RPL29P05747 59 aaPredicted RBP-0.62□□□□□ -2.51
NME1NME1 YLL066W-BQ8TGJ7 56 aa-0.62□□□□□ -2.51
NME1NME1 STU1P38198 1513 aa-0.63□□□□□ -2.51
NME1NME1 TY3B-GQ99315 1547 aa-0.63□□□□□ -2.51
NME1NME1 RRP5Q05022 1729 aaKnown RBP-0.63□□□□□ -2.51
NME1NME1 YBR200W-AQ3E755 54 aa-0.63□□□□□ -2.51
NME1NME1 YOR032W-AQ8TGS1 66 aa-0.63□□□□□ -2.51
NME1NME1 NUP159P40477 1460 aa-0.63□□□□□ -2.51
NME1NME1 DNF1P32660 1571 aa-0.63□□□□□ -2.51
NME1NME1 YCF1P39109 1515 aaKnown RBP-0.64□□□□□ -2.51
Retrieved 100 of 5,963 RNA–protein pairs in 112.5 ms