RNA–Protein interactions for RNA: snR48

snR48, Transcript of C/D box small nucleolar RNA (snoRNA), yeastyeast

Gene snR48, Length 113 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
snR48snR48 SDH6Q3E785 79 aa-3.06□□□□□ -2.9
snR48snR48 MEC1P38111 2368 aa-3.07□□□□□ -2.9
snR48snR48 YBL071CP38185 102 aa-3.07□□□□□ -2.9
snR48snR48 VMA21P41806 77 aa-3.08□□□□□ -2.9
snR48snR48 BUD23P25627 275 aaPredicted RBP-3.09□□□□□ -2.9
snR48snR48 TY2B-LR1P0C2J3 1770 aa-3.1□□□□□ -2.91
snR48snR48 TY2B-FP0CX63 1770 aa-3.1□□□□□ -2.91
snR48snR48 TY2B-GR2P0CX64 1770 aa-3.1□□□□□ -2.91
snR48snR48 TY2B-CP25384 1770 aa-3.1□□□□□ -2.91
snR48snR48 TY2B-DR2Q03494 1770 aa-3.1□□□□□ -2.91
snR48snR48 TY2B-DR3Q07791 1770 aaKnown RBP-3.1□□□□□ -2.91
snR48snR48 TY2B-OR1Q12113 1770 aa-3.1□□□□□ -2.91
snR48snR48 TY2B-DR1Q12472 1770 aa-3.1□□□□□ -2.91
snR48snR48 TY2B-BQ12491 1770 aa-3.1□□□□□ -2.91
snR48snR48 TY2B-OR2Q12501 1770 aa-3.1□□□□□ -2.91
snR48snR48 GCN1P33892 2672 aaKnown RBP-3.11□□□□□ -2.91
snR48snR48 YDR182W-AQ3E796 67 aa-3.12□□□□□ -2.91
snR48snR48 RPB11P38902 120 aa-3.13□□□□□ -2.91
snR48snR48 PAU4P53427 120 aa-3.13□□□□□ -2.91
snR48snR48 TIM8P57744 87 aa-3.13□□□□□ -2.91
snR48snR48 SWC7Q06707 132 aa-3.14□□□□□ -2.91
snR48snR48 YAR029WP39549 74 aa-3.16□□□□□ -2.92
snR48snR48 PAU5P43575 122 aa-3.16□□□□□ -2.92
snR48snR48 TY1B-MR1Q04214 1755 aa-3.16□□□□□ -2.92
snR48snR48 YBR032WP38223 100 aa-3.18□□□□□ -2.92
snR48snR48 YMR122W-AQ3E842 84 aa-3.18□□□□□ -2.92
snR48snR48 YBR090CP38253 122 aa-3.19□□□□□ -2.92
snR48snR48 ATP18P81450 59 aa-3.19□□□□□ -2.92
snR48snR48 CHD1P32657 1468 aa-3.2□□□□□ -2.92
snR48snR48 YKL018C-AQ3E7A7 99 aa-3.21□□□□□ -2.92
snR48snR48 KRE5P22023 1365 aa-3.22□□□□□ -2.92
snR48snR48 TY1B-NL1Q12112 1755 aa-3.22□□□□□ -2.92
snR48snR48 TY1B-GR3Q12316 1755 aa-3.22□□□□□ -2.92
snR48snR48 YCR085WP25650 117 aa-3.22□□□□□ -2.92
snR48snR48 NKP2Q06162 153 aa-3.22□□□□□ -2.92
snR48snR48 YOR008C-AQ3E7B9 74 aa-3.22□□□□□ -2.92
snR48snR48 RPO21P04050 1733 aaKnown RBP-3.22□□□□□ -2.93
snR48snR48 YPR108W-AQ3E7B3 70 aa-3.23□□□□□ -2.93
snR48snR48 YHR214C-DP0CX93 97 aa-3.24□□□□□ -2.93
snR48snR48 UBC5P15732 148 aa-3.25□□□□□ -2.93
snR48snR48 SPC1P46965 94 aa-3.25□□□□□ -2.93
snR48snR48 RTR2Q12378 196 aa-3.25□□□□□ -2.93
snR48snR48 STT4P37297 1900 aa-3.26□□□□□ -2.93
snR48snR48 YAL065CO13511 128 aa-3.26□□□□□ -2.93
snR48snR48 VTH1P40438 1549 aa-3.26□□□□□ -2.93
snR48snR48 VTH2P40890 1549 aa-3.26□□□□□ -2.93
snR48snR48 MRP49P32388 137 aa-3.27□□□□□ -2.93
snR48snR48 NHP10Q03435 203 aa-3.27□□□□□ -2.93
snR48snR48 SPC2Q04969 178 aa-3.27□□□□□ -2.93
snR48snR48 YOS1Q3E834 85 aa-3.27□□□□□ -2.93
snR48snR48 TLG1Q03322 224 aa-3.28□□□□□ -2.93
snR48snR48 YLR099W-AQ3E798 87 aa-3.3□□□□□ -2.94
snR48snR48 LYS2P07702 1392 aa-3.31□□□□□ -2.94
snR48snR48 TY1B-ER2Q03619 1755 aa-3.32□□□□□ -2.94
snR48snR48 TY1B-LR1Q12088 1755 aaKnown RBP-3.32□□□□□ -2.94
snR48snR48 TY1B-NL2Q99337 1749 aaKnown RBP-3.32□□□□□ -2.94
snR48snR48 SPO14P36126 1683 aa-3.33□□□□□ -2.94
snR48snR48 BSC4P53841 131 aa-3.33□□□□□ -2.94
snR48snR48 TOS6P48560 102 aa-3.34□□□□□ -2.94
snR48snR48 YHL005CP38752 130 aa-3.35□□□□□ -2.95
snR48snR48 EMC5P40540 141 aa-3.35□□□□□ -2.95
snR48snR48 GNA1P43577 159 aaPredicted RBP-3.36□□□□□ -2.95
snR48snR48 YOR289WQ12012 251 aaPredicted RBP-3.36□□□□□ -2.95
snR48snR48 TY3B-IQ7LHG5 1498 aaKnown RBP-3.37□□□□□ -2.95
snR48snR48 VMA7P39111 118 aa-3.38□□□□□ -2.95
snR48snR48 UBC4P15731 148 aa-3.39□□□□□ -2.95
snR48snR48 YOL097W-AQ3E7Y9 61 aa-3.39□□□□□ -2.95
snR48snR48 ECM29P38737 1868 aa-3.4□□□□□ -2.95
snR48snR48 DYN2Q02647 92 aa-3.4□□□□□ -2.95
snR48snR48 RSM19P53733 91 aaPredicted RBP-3.42□□□□□ -2.96
snR48snR48 SIP18P50263 79 aa-3.44□□□□□ -2.96
snR48snR48 RPS27AP35997 82 aaKnown RBP-3.45□□□□□ -2.96
snR48snR48 NHP2P32495 156 aaPredicted RBP-3.48□□□□□ -2.97
snR48snR48 SNU13P39990 126 aaKnown RBP-3.48□□□□□ -2.97
snR48snR48 FPR2P32472 135 aa-3.49□□□□□ -2.97
snR48snR48 YKL068W-AQ3E826 78 aa-3.49□□□□□ -2.97
snR48snR48 HMRA1P0CY11 126 aa-3.51□□□□□ -2.97
snR48snR48 YMR090WQ04304 227 aaKnown RBP-3.52□□□□□ -2.97
snR48snR48 MOT1P32333 1867 aa-3.53□□□□□ -2.97
snR48snR48 YMR103CQ04436 120 aa-3.53□□□□□ -2.97
snR48snR48 POC4Q12245 148 aaPredicted RBP-3.53□□□□□ -2.97
snR48snR48 YER039C-AP0CD97 72 aa-3.54□□□□□ -2.98
snR48snR48 YDR029WQ12111 104 aa-3.54□□□□□ -2.98
snR48snR48 XRN1P22147 1528 aaKnown RBP-3.54□□□□□ -2.98
snR48snR48 QCR6P00127 147 aa-3.55□□□□□ -2.98
snR48snR48 PAU23Q07987 124 aa-3.55□□□□□ -2.98
snR48snR48 PAU17Q12370 124 aa-3.55□□□□□ -2.98
snR48snR48 LHP1P33399 275 aaKnown RBP-3.56□□□□□ -2.98
snR48snR48 OLI1P61829 76 aa-3.59□□□□□ -2.98
snR48snR48 RRT15Q3E811 62 aa-3.6□□□□□ -2.99
snR48snR48 SPP41P38904 1435 aa-3.61□□□□□ -2.99
snR48snR48 PDR11P40550 1411 aa-3.61□□□□□ -2.99
snR48snR48 SMC4Q12267 1418 aa-3.61□□□□□ -2.99
snR48snR48 IRC20Q06554 1556 aa-3.62□□□□□ -2.99
snR48snR48 LSM2P38203 95 aaKnown RBP-3.62□□□□□ -2.99
snR48snR48 NOP10Q6Q547 58 aaPredicted RBP-3.62□□□□□ -2.99
snR48snR48 KSH1Q8TGJ3 72 aa-3.62□□□□□ -2.99
snR48snR48 POL1P13382 1468 aa-3.62□□□□□ -2.99
snR48snR48 YOR343CQ12484 108 aa-3.64□□□□□ -2.99
snR48snR48 GEA1P47102 1408 aaPredicted RBP-3.64□□□□□ -2.99
Retrieved 100 of 5,963 RNA–protein pairs in 51.4 ms