RNA–Protein interactions for RNA: YPL233W

NSL1, Transcript of Essential component of the MIND kinetochore complex, yeast

Gene NSL1, Length 651 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
NSL1	YPL233W	IQG1	Q12280	1495 aa		0.52	□□□□□ -2.33
NSL1	YPL233W	PDR5	P33302	1511 aa	Known RBP	0.52	□□□□□ -2.33
NSL1	YPL233W	GCN1	P33892	2672 aa	Known RBP	0.51	□□□□□ -2.33
NSL1	YPL233W	YLR255C	O13574	117 aa		0.51	□□□□□ -2.33
NSL1	YPL233W	YOR304C-A	O14468	76 aa		0.51	□□□□□ -2.33
NSL1	YPL233W	TOP2	P06786	1428 aa	Known RBP	0.51	□□□□□ -2.33
NSL1	YPL233W	IRA2	P19158	3079 aa		0.51	□□□□□ -2.33
NSL1	YPL233W	YHR173C	P38864	112 aa		0.51	□□□□□ -2.33
NSL1	YPL233W	NUP188	P52593	1655 aa	Known RBP	0.51	□□□□□ -2.33
NSL1	YPL233W	PDR12	Q02785	1511 aa		0.51	□□□□□ -2.33
NSL1	YPL233W	LSM6	Q06406	86 aa	Known RBP	0.51	□□□□□ -2.33
NSL1	YPL233W	SNQ2	P32568	1501 aa	Known RBP	0.5	□□□□□ -2.33
NSL1	YPL233W	SSN2	P38931	1420 aa		0.5	□□□□□ -2.33
NSL1	YPL233W	YSP2	Q06681	1438 aa		0.5	□□□□□ -2.33
NSL1	YPL233W	BUD23	P25627	275 aa	Predicted RBP	0.5	□□□□□ -2.33
NSL1	YPL233W	VMA21	P41806	77 aa		0.5	□□□□□ -2.33
NSL1	YPL233W	HUR1	P45820	110 aa		0.5	□□□□□ -2.33
NSL1	YPL233W	VTH1	P40438	1549 aa		0.49	□□□□□ -2.33
NSL1	YPL233W	VTH2	P40890	1549 aa		0.49	□□□□□ -2.33
NSL1	YPL233W	PAU16	P35994	123 aa		0.49	□□□□□ -2.33
NSL1	YPL233W	PAU15	P40585	124 aa		0.49	□□□□□ -2.33
NSL1	YPL233W	RUB1	Q03919	77 aa		0.49	□□□□□ -2.33
NSL1	YPL233W	YDR034W-B	Q6Q5X2	51 aa		0.49	□□□□□ -2.33
NSL1	YPL233W	FMP27	Q06179	2628 aa		0.49	□□□□□ -2.33
NSL1	YPL233W	SRB8	P25648	1427 aa		0.48	□□□□□ -2.33
NSL1	YPL233W	BRR2	P32639	2163 aa	Known RBP	0.48	□□□□□ -2.33
NSL1	YPL233W	YHR138C	P38841	114 aa	Predicted RBP	0.48	□□□□□ -2.33
NSL1	YPL233W	GCV3	P39726	170 aa	Predicted RBP	0.48	□□□□□ -2.33
NSL1	YPL233W	IMP2	P46972	177 aa		0.48	□□□□□ -2.33
NSL1	YPL233W	SWC7	Q06707	132 aa		0.48	□□□□□ -2.33
NSL1	YPL233W	YLR419W	Q06698	1435 aa	Known RBP	0.47	□□□□□ -2.33
NSL1	YPL233W	RSF2	P46974	1380 aa		0.47	□□□□□ -2.33
NSL1	YPL233W	MLP2	P40457	1679 aa		0.47	□□□□□ -2.33
NSL1	YPL233W	LHP1	P33399	275 aa	Known RBP	0.47	□□□□□ -2.33
NSL1	YPL233W	YIL086C	P40503	102 aa		0.47	□□□□□ -2.33
NSL1	YPL233W	YGR164W	P53291	111 aa		0.47	□□□□□ -2.33
NSL1	YPL233W	YOL118C	Q08259	102 aa		0.47	□□□□□ -2.33
NSL1	YPL233W	RIM15	P43565	1770 aa		0.47	□□□□□ -2.33
NSL1	YPL233W	DYN1	P36022	4092 aa		0.46	□□□□□ -2.34
NSL1	YPL233W	FIG2	P25653	1609 aa		0.46	□□□□□ -2.34
NSL1	YPL233W	CCW14	O13547	238 aa		0.46	□□□□□ -2.34
NSL1	YPL233W	YDR210W	Q03482	75 aa		0.46	□□□□□ -2.34
NSL1	YPL233W	YOL164W-A	Q3E7A5	60 aa		0.46	□□□□□ -2.34
NSL1	YPL233W	SKI3	P17883	1432 aa	Known RBP	0.46	□□□□□ -2.34
NSL1	YPL233W	LYS2	P07702	1392 aa		0.45	□□□□□ -2.34
NSL1	YPL233W	TOR2	P32600	2474 aa	Known RBP	0.45	□□□□□ -2.34
NSL1	YPL233W	SRB6	P32570	121 aa		0.45	□□□□□ -2.34
NSL1	YPL233W	SHU1	P38751	150 aa		0.45	□□□□□ -2.34
NSL1	YPL233W	NUP192	P47054	1683 aa		0.45	□□□□□ -2.34
NSL1	YPL233W	TSC11	P40061	1430 aa		0.45	□□□□□ -2.34
NSL1	YPL233W	GNA1	P43577	159 aa	Predicted RBP	0.44	□□□□□ -2.34
NSL1	YPL233W	COX19	Q3E731	98 aa		0.44	□□□□□ -2.34
NSL1	YPL233W	MIC10	Q96VH5	97 aa		0.44	□□□□□ -2.34
NSL1	YPL233W	YCR101C	P25607	182 aa		0.43	□□□□□ -2.34
NSL1	YPL233W	YPL038W-A	Q3E7B4	63 aa		0.43	□□□□□ -2.34
NSL1	YPL233W	PDR11	P40550	1411 aa		0.43	□□□□□ -2.34
NSL1	YPL233W	UTP20	P35194	2493 aa	Known RBP	0.43	□□□□□ -2.34
NSL1	YPL233W	KRE5	P22023	1365 aa		0.43	□□□□□ -2.34
NSL1	YPL233W	RRP5	Q05022	1729 aa	Known RBP	0.42	□□□□□ -2.34
NSL1	YPL233W	YMR103C	Q04436	120 aa		0.42	□□□□□ -2.34
NSL1	YPL233W	YOS1	Q3E834	85 aa		0.42	□□□□□ -2.34
NSL1	YPL233W	TAO3	P40468	2376 aa		0.42	□□□□□ -2.34
NSL1	YPL233W	RPA12	P32529	125 aa	Known RBP	0.41	□□□□□ -2.34
NSL1	YPL233W	MPC2	P38857	129 aa		0.41	□□□□□ -2.34
NSL1	YPL233W	YER137C	P40083	148 aa	Known RBP	0.41	□□□□□ -2.34
NSL1	YPL233W	COX12	Q01519	83 aa		0.41	□□□□□ -2.34
NSL1	YPL233W	FKS3	Q04952	1785 aa		0.4	□□□□□ -2.35
NSL1	YPL233W	UBC4	P15731	148 aa		0.4	□□□□□ -2.35
NSL1	YPL233W	RPS12	P48589	143 aa	Known RBP	0.4	□□□□□ -2.35
NSL1	YPL233W	TRA1	P38811	3744 aa		0.39	□□□□□ -2.35
NSL1	YPL233W	YCR095W-A	Q3E787	52 aa		0.39	□□□□□ -2.35
NSL1	YPL233W	POL2	P21951	2222 aa	Known RBP	0.39	□□□□□ -2.35
NSL1	YPL233W	TY3B-I	Q7LHG5	1498 aa	Known RBP	0.39	□□□□□ -2.35
NSL1	YPL233W	APC1	P53886	1748 aa		0.38	□□□□□ -2.35
NSL1	YPL233W	YMR090W	Q04304	227 aa	Known RBP	0.38	□□□□□ -2.35
NSL1	YPL233W	FLO1	P32768	1537 aa		0.38	□□□□□ -2.35
NSL1	YPL233W	RPS11A	P0CX47	156 aa	Known RBP	0.37	□□□□□ -2.35
NSL1	YPL233W	RPS11B	P0CX48	156 aa	Known RBP	0.37	□□□□□ -2.35
NSL1	YPL233W	PAU5	P43575	122 aa		0.37	□□□□□ -2.35
NSL1	YPL233W	MRX7	P53869	86 aa		0.37	□□□□□ -2.35
NSL1	YPL233W	CSF1	Q12150	2958 aa		0.37	□□□□□ -2.35
NSL1	YPL233W	GEA1	P47102	1408 aa	Predicted RBP	0.37	□□□□□ -2.35
NSL1	YPL233W	UBC5	P15732	148 aa		0.36	□□□□□ -2.35
NSL1	YPL233W	SNA2	P56508	79 aa		0.36	□□□□□ -2.35
NSL1	YPL233W	YBR056W-A	I2HB52	66 aa		0.35	□□□□□ -2.35
NSL1	YPL233W	PAU6	P0CE90	120 aa		0.35	□□□□□ -2.35
NSL1	YPL233W	PAU18	P0CE91	120 aa		0.35	□□□□□ -2.35
NSL1	YPL233W	MRP17	P28778	131 aa		0.35	□□□□□ -2.35
NSL1	YPL233W	MRPL38	P35996	138 aa	Predicted RBP	0.35	□□□□□ -2.35
NSL1	YPL233W	YBR090C	P38253	122 aa		0.35	□□□□□ -2.35
NSL1	YPL233W	ROX3	P25046	220 aa		0.34	□□□□□ -2.36
NSL1	YPL233W	YBR292C	P38357	123 aa		0.34	□□□□□ -2.36
NSL1	YPL233W	RSM19	P53733	91 aa	Predicted RBP	0.34	□□□□□ -2.36
NSL1	YPL233W	YNL190W	P53872	204 aa		0.34	□□□□□ -2.36
NSL1	YPL233W	ICY1	Q04329	127 aa		0.34	□□□□□ -2.36
NSL1	YPL233W	MIX14	Q04341	121 aa		0.34	□□□□□ -2.36
NSL1	YPL233W	ATX1	P38636	73 aa		0.33	□□□□□ -2.36
NSL1	YPL233W	RGI1	P40043	161 aa	Predicted RBP	0.33	□□□□□ -2.36
NSL1	YPL233W	YNR034W-A	Q3E841	98 aa		0.33	□□□□□ -2.36
NSL1	YPL233W	YBL071C	P38185	102 aa		0.32	□□□□□ -2.36

Retrieved 100 of 5,963 RNA–protein pairs in 22.6 ms