RNA–Protein interactions for RNA: YPL173W

MRPL40, Transcript of Mitochondrial ribosomal protein of the large subunit, yeastyeast

Gene MRPL40, Length 894 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MRPL40YPL173W ICY1Q04329 127 aa0.67□□□□□ -2.3
MRPL40YPL173W TY1B-DR4Q07793 1604 aa0.67□□□□□ -2.3
MRPL40YPL173W RKR1Q04781 1562 aa0.66□□□□□ -2.3
MRPL40YPL173W RPS11AP0CX47 156 aaKnown RBP0.66□□□□□ -2.3
MRPL40YPL173W RPS11BP0CX48 156 aaKnown RBP0.66□□□□□ -2.3
MRPL40YPL173W MRP17P28778 131 aa0.65□□□□□ -2.31
MRPL40YPL173W SPC1P46965 94 aa0.65□□□□□ -2.31
MRPL40YPL173W NHP10Q03435 203 aa0.65□□□□□ -2.31
MRPL40YPL173W PAU20Q08322 120 aa0.65□□□□□ -2.31
MRPL40YPL173W YDR034W-BQ6Q5X2 51 aa0.65□□□□□ -2.31
MRPL40YPL173W HAP1P0CE41 1502 aa0.64□□□□□ -2.31
MRPL40YPL173W YHL005CP38752 130 aa0.64□□□□□ -2.31
MRPL40YPL173W EMC5P40540 141 aa0.64□□□□□ -2.31
MRPL40YPL173W RPS29BP41058 56 aaKnown RBP0.64□□□□□ -2.31
MRPL40YPL173W SMC4Q12267 1418 aa0.64□□□□□ -2.31
MRPL40YPL173W GCN2P15442 1659 aa0.63□□□□□ -2.31
MRPL40YPL173W CHC1P22137 1653 aaKnown RBP0.63□□□□□ -2.31
MRPL40YPL173W BRR2P32639 2163 aaKnown RBP0.63□□□□□ -2.31
MRPL40YPL173W PAU1P0CE88 120 aa0.62□□□□□ -2.31
MRPL40YPL173W PAU14P0CE89 120 aa0.62□□□□□ -2.31
MRPL40YPL173W PAU8P0CE92 120 aa0.62□□□□□ -2.31
MRPL40YPL173W PAU11P0CE93 120 aa0.62□□□□□ -2.31
MRPL40YPL173W PAU13P38725 120 aa0.62□□□□□ -2.31
MRPL40YPL173W PAU10Q03050 120 aa0.62□□□□□ -2.31
MRPL40YPL173W ZEO1Q08245 113 aa0.62□□□□□ -2.31
MRPL40YPL173W YPL225WQ08971 146 aaKnown RBP0.62□□□□□ -2.31
MRPL40YPL173W PAU9Q3E770 120 aa0.62□□□□□ -2.31
MRPL40YPL173W ULS1Q08562 1619 aa0.62□□□□□ -2.31
MRPL40YPL173W DOP1Q03921 1698 aa0.62□□□□□ -2.31
MRPL40YPL173W DNF3Q12674 1656 aa0.62□□□□□ -2.31
MRPL40YPL173W RSF2P46974 1380 aa0.61□□□□□ -2.31
MRPL40YPL173W RSM18P40033 138 aa0.61□□□□□ -2.31
MRPL40YPL173W BCK1Q01389 1478 aa0.61□□□□□ -2.31
MRPL40YPL173W YBR292CP38357 123 aa0.6□□□□□ -2.31
MRPL40YPL173W RPC10P40422 70 aa0.6□□□□□ -2.31
MRPL40YPL173W AIM19P40502 157 aa0.6□□□□□ -2.31
MRPL40YPL173W MSL1P40567 111 aaPredicted RBP0.6□□□□□ -2.31
MRPL40YPL173W VPS15P22219 1454 aa0.6□□□□□ -2.31
MRPL40YPL173W USO1P25386 1790 aa0.6□□□□□ -2.31
MRPL40YPL173W PAU4P53427 120 aa0.59□□□□□ -2.31
MRPL40YPL173W YNL190WP53872 204 aa0.59□□□□□ -2.31
MRPL40YPL173W XRN1P22147 1528 aaKnown RBP0.59□□□□□ -2.32
MRPL40YPL173W POL2P21951 2222 aaKnown RBP0.58□□□□□ -2.32
MRPL40YPL173W TCB3Q03640 1545 aaKnown RBP0.58□□□□□ -2.32
MRPL40YPL173W BLM10P43583 2143 aa0.58□□□□□ -2.32
MRPL40YPL173W ARO1P08566 1588 aaKnown RBP0.57□□□□□ -2.32
MRPL40YPL173W BUD3P25558 1636 aa0.57□□□□□ -2.32
MRPL40YPL173W PDR5P33302 1511 aaKnown RBP0.57□□□□□ -2.32
MRPL40YPL173W GDB1Q06625 1536 aa0.57□□□□□ -2.32
MRPL40YPL173W YRF1-1P0CX20 1796 aa0.57□□□□□ -2.32
MRPL40YPL173W YRF1-5P0CX21 1796 aa0.57□□□□□ -2.32
MRPL40YPL173W YRF1-8P0CX22 1796 aa0.57□□□□□ -2.32
MRPL40YPL173W YRF1-2P40105 1681 aa0.56□□□□□ -2.32
MRPL40YPL173W SNQ2P32568 1501 aaKnown RBP0.56□□□□□ -2.32
MRPL40YPL173W YDR029WQ12111 104 aa0.56□□□□□ -2.32
MRPL40YPL173W IML1P47170 1584 aa0.56□□□□□ -2.32
MRPL40YPL173W NUP170P38181 1502 aa0.55□□□□□ -2.32
MRPL40YPL173W ATG2P53855 1592 aa0.55□□□□□ -2.32
MRPL40YPL173W YSP2Q06681 1438 aa0.55□□□□□ -2.32
MRPL40YPL173W MYO1P08964 1928 aa0.54□□□□□ -2.32
MRPL40YPL173W SNU13P39990 126 aaKnown RBP0.54□□□□□ -2.32
MRPL40YPL173W YNL198CP40166 100 aa0.54□□□□□ -2.32
MRPL40YPL173W YDR042CQ03205 200 aa0.54□□□□□ -2.32
MRPL40YPL173W FAS2P19097 1887 aaKnown RBP0.54□□□□□ -2.32
MRPL40YPL173W SCC2Q04002 1493 aa0.54□□□□□ -2.32
MRPL40YPL173W RIM15P43565 1770 aa0.53□□□□□ -2.32
MRPL40YPL173W SUS1Q6WNK7 96 aa0.53□□□□□ -2.32
MRPL40YPL173W SPT6P23615 1451 aaKnown RBP0.53□□□□□ -2.33
MRPL40YPL173W YJR107C-AP0CT86 78 aa0.51□□□□□ -2.33
MRPL40YPL173W NHP2P32495 156 aaPredicted RBP0.51□□□□□ -2.33
MRPL40YPL173W YNL042W-BQ3E7Z2 85 aa0.51□□□□□ -2.33
MRPL40YPL173W Q0032Q9ZZX7 96 aa0.51□□□□□ -2.33
MRPL40YPL173W STU1P38198 1513 aa0.5□□□□□ -2.33
MRPL40YPL173W VTH1P40438 1549 aa0.5□□□□□ -2.33
MRPL40YPL173W VTH2P40890 1549 aa0.5□□□□□ -2.33
MRPL40YPL173W NUP159P40477 1460 aa0.5□□□□□ -2.33
MRPL40YPL173W MHF2Q3E829 80 aa0.5□□□□□ -2.33
MRPL40YPL173W YCR075W-AQ3E830 75 aa0.5□□□□□ -2.33
MRPL40YPL173W TY1B-BLQ12490 1755 aa0.5□□□□□ -2.33
MRPL40YPL173W MYO4P32492 1471 aa0.49□□□□□ -2.33
MRPL40YPL173W UFD4P33202 1483 aa0.49□□□□□ -2.33
MRPL40YPL173W BSC4P53841 131 aa0.49□□□□□ -2.33
MRPL40YPL173W YBR201C-AQ2V2Q3 67 aa0.49□□□□□ -2.33
MRPL40YPL173W SPO14P36126 1683 aa0.49□□□□□ -2.33
MRPL40YPL173W NUP192P47054 1683 aa0.49□□□□□ -2.33
MRPL40YPL173W RPL38P49167 78 aaKnown RBP0.48□□□□□ -2.33
MRPL40YPL173W MMS22Q06164 1454 aa0.48□□□□□ -2.33
MRPL40YPL173W RPO21P04050 1733 aaKnown RBP0.47□□□□□ -2.33
MRPL40YPL173W YBT1P32386 1661 aa0.47□□□□□ -2.33
MRPL40YPL173W YCL001W-BQ96VH2 84 aa0.47□□□□□ -2.33
MRPL40YPL173W IQG1Q12280 1495 aa0.47□□□□□ -2.33
MRPL40YPL173W YFR009W-AP0C5M9 85 aa0.46□□□□□ -2.34
MRPL40YPL173W COX7P10174 60 aa0.46□□□□□ -2.34
MRPL40YPL173W VMR1P38735 1592 aa0.45□□□□□ -2.34
MRPL40YPL173W TY1B-NL2Q99337 1749 aaKnown RBP0.45□□□□□ -2.34
MRPL40YPL173W SCP1Q08873 200 aa0.45□□□□□ -2.34
MRPL40YPL173W SKI3P17883 1432 aaKnown RBP0.45□□□□□ -2.34
MRPL40YPL173W TY1B-BRQ12193 1756 aa0.45□□□□□ -2.34
MRPL40YPL173W TY1B-GR3Q12316 1755 aa0.45□□□□□ -2.34
MRPL40YPL173W TY1B-ORQ92393 1755 aa0.45□□□□□ -2.34
Retrieved 100 of 5,963 RNA–protein pairs in 20.5 ms