RNA–Protein interactions for RNA: YOR250C

CLP1, Transcript of Component of the cleavage and polyadenylation factor I (CF I), yeastyeast

Gene CLP1, Length 1,338 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CLP1YOR250C YMR181CQ03231 154 aa4.33□□□□□ -1.72
CLP1YOR250C YLR194CQ05777 254 aa4.33□□□□□ -1.72
CLP1YOR250C YOR008C-AQ3E7B9 74 aa4.33□□□□□ -1.72
CLP1YOR250C YSY6P38374 65 aa4.32□□□□□ -1.72
CLP1YOR250C CCW14O13547 238 aa4.31□□□□□ -1.72
CLP1YOR250C RPL42AP0CX27 106 aaKnown RBP4.31□□□□□ -1.72
CLP1YOR250C RPL42BP0CX28 106 aaKnown RBP4.31□□□□□ -1.72
CLP1YOR250C TDA2P40045 126 aa4.31□□□□□ -1.72
CLP1YOR250C YER187WP40102 141 aa4.31□□□□□ -1.72
CLP1YOR250C SIM1P40472 476 aa4.31□□□□□ -1.72
CLP1YOR250C YMR295CQ03559 197 aa4.31□□□□□ -1.72
CLP1YOR250C SPG4Q04438 115 aa4.31□□□□□ -1.72
CLP1YOR250C YOL160WQ08321 113 aa4.31□□□□□ -1.72
CLP1YOR250C MRPL38P35996 138 aaPredicted RBP4.3□□□□□ -1.72
CLP1YOR250C RSM18P40033 138 aa4.3□□□□□ -1.72
CLP1YOR250C YFL051CP43552 160 aa4.3□□□□□ -1.72
CLP1YOR250C HUR1P45820 110 aa4.3□□□□□ -1.72
CLP1YOR250C VPS55P47111 140 aa4.3□□□□□ -1.72
CLP1YOR250C TOS8P53147 276 aa4.3□□□□□ -1.72
CLP1YOR250C YDL009CQ12210 107 aa4.3□□□□□ -1.72
CLP1YOR250C IRA2P19158 3079 aa4.3□□□□□ -1.72
CLP1YOR250C HFA1P32874 2273 aa4.29□□□□□ -1.72
CLP1YOR250C YBL081WP38180 368 aaKnown RBP4.29□□□□□ -1.72
CLP1YOR250C CTR2P38865 189 aa4.29□□□□□ -1.72
CLP1YOR250C IRC23Q08416 157 aa4.29□□□□□ -1.72
CLP1YOR250C DSE2P38844 325 aa4.28□□□□□ -1.72
CLP1YOR250C AIM19P40502 157 aa4.28□□□□□ -1.72
CLP1YOR250C PRM7Q12459 698 aa4.28□□□□□ -1.72
CLP1YOR250C CUP1-1P0CX80 61 aa4.27□□□□□ -1.73
CLP1YOR250C CUP1-2P0CX81 61 aa4.27□□□□□ -1.73
CLP1YOR250C LDB16P25587 256 aa4.27□□□□□ -1.73
CLP1YOR250C POR2P40478 281 aa4.27□□□□□ -1.73
CLP1YOR250C YFR035CP43608 114 aa4.27□□□□□ -1.73
CLP1YOR250C YGL260WP53056 76 aa4.27□□□□□ -1.73
CLP1YOR250C SED1Q01589 338 aa4.27□□□□□ -1.73
CLP1YOR250C YML100W-AQ8TGT0 57 aa4.27□□□□□ -1.73
CLP1YOR250C ATP15P21306 62 aa4.26□□□□□ -1.73
CLP1YOR250C YHL037CP38733 133 aa4.26□□□□□ -1.73
CLP1YOR250C YHL005CP38752 130 aa4.26□□□□□ -1.73
CLP1YOR250C YFL019CP43576 117 aa4.26□□□□□ -1.73
CLP1YOR250C DCV1P43595 202 aa4.26□□□□□ -1.73
CLP1YOR250C KEG1P43614 200 aa4.26□□□□□ -1.73
CLP1YOR250C YPS5P53057 165 aa4.26□□□□□ -1.73
CLP1YOR250C MRPS12P53732 153 aa4.26□□□□□ -1.73
CLP1YOR250C ICY1Q04329 127 aa4.26□□□□□ -1.73
CLP1YOR250C RPB9P27999 122 aa4.25□□□□□ -1.73
CLP1YOR250C YJR146WP47174 117 aa4.25□□□□□ -1.73
CLP1YOR250C GIS2P53849 153 aaKnown RBP RIP-Chip data4.25□□□□□ -1.73not detected
CLP1YOR250C FMP27Q06179 2628 aa4.25□□□□□ -1.73
CLP1YOR250C PPT2Q12036 173 aa4.25□□□□□ -1.73
CLP1YOR250C ICS3P47034 131 aa4.24□□□□□ -1.73
CLP1YOR250C PBA1Q05778 276 aa4.24□□□□□ -1.73
CLP1YOR250C YKL065W-AQ2V2P2 73 aa4.24□□□□□ -1.73
CLP1YOR250C YBR200W-AQ3E755 54 aa4.24□□□□□ -1.73
CLP1YOR250C YNL190WP53872 204 aa4.23□□□□□ -1.73
CLP1YOR250C SPS100P13130 326 aa4.22□□□□□ -1.73
CLP1YOR250C YHR022CP38763 256 aa4.22□□□□□ -1.73
CLP1YOR250C YGR025WP53216 100 aa4.22□□□□□ -1.73
CLP1YOR250C CCW12Q12127 133 aa4.22□□□□□ -1.73
CLP1YOR250C YOR314WQ12506 109 aa4.22□□□□□ -1.73
CLP1YOR250C YOR376W-AQ3E805 51 aa4.22□□□□□ -1.73
CLP1YOR250C RRT15Q3E811 62 aa4.22□□□□□ -1.73
CLP1YOR250C RPL26AP05743 127 aaKnown RBP4.21□□□□□ -1.73
CLP1YOR250C QCR8P08525 94 aa4.21□□□□□ -1.73
CLP1YOR250C YCL048W-AQ2V2Q2 79 aa4.21□□□□□ -1.73
CLP1YOR250C TDA8Q6B2U8 126 aa4.21□□□□□ -1.73
CLP1YOR250C YAL065CO13511 128 aa4.21□□□□□ -1.74
CLP1YOR250C AIM4P38305 123 aaPredicted RBP4.21□□□□□ -1.74
CLP1YOR250C SHU1P38751 150 aa4.21□□□□□ -1.74
CLP1YOR250C WWM1P43582 211 aaKnown RBP4.21□□□□□ -1.74
CLP1YOR250C MSA2P36157 363 aa4.2□□□□□ -1.74
CLP1YOR250C YDR274CP87283 123 aa4.2□□□□□ -1.74
CLP1YOR250C YOL085CQ99345 113 aa4.2□□□□□ -1.74
CLP1YOR250C RPL15AP05748 204 aaKnown RBP4.19□□□□□ -1.74
CLP1YOR250C DDR48P18899 430 aaKnown RBP4.19□□□□□ -1.74
CLP1YOR250C MPC2P38857 129 aa4.19□□□□□ -1.74
CLP1YOR250C YAL064WP39711 94 aa4.19□□□□□ -1.74
CLP1YOR250C YER135CP40082 130 aa4.19□□□□□ -1.74
CLP1YOR250C YMR230W-AQ3E7B5 62 aa4.19□□□□□ -1.74
CLP1YOR250C YNL146C-AQ3E7Z1 64 aa4.18□□□□□ -1.74
CLP1YOR250C YOR381W-AQ3E804 55 aa4.18□□□□□ -1.74
CLP1YOR250C BPH1P25356 2167 aa4.17□□□□□ -1.74
CLP1YOR250C YER145C-AA0A023PYF4 145 aa4.17□□□□□ -1.74
CLP1YOR250C HHF1P02309 103 aaKnown RBP4.17□□□□□ -1.74
CLP1YOR250C YEL045CP32616 141 aa4.17□□□□□ -1.74
CLP1YOR250C YEL008WP40001 126 aa4.17□□□□□ -1.74
CLP1YOR250C MPC3P53311 146 aa4.17□□□□□ -1.74
CLP1YOR250C RGM1Q00453 211 aa4.17□□□□□ -1.74
CLP1YOR250C YOR268CQ08734 132 aa4.17□□□□□ -1.74
CLP1YOR250C IRA1P18963 3092 aa4.15□□□□□ -1.75
CLP1YOR250C YBR209WP38311 105 aa4.15□□□□□ -1.75
CLP1YOR250C TMC1Q08422 150 aaPredicted RBP4.15□□□□□ -1.75
CLP1YOR250C YPR013CQ12145 317 aa4.15□□□□□ -1.75
CLP1YOR250C YDR182W-AQ3E796 67 aa4.15□□□□□ -1.75
CLP1YOR250C OST5Q92316 86 aa4.15□□□□□ -1.75
CLP1YOR250C FYV5P25585 152 aa4.14□□□□□ -1.75
CLP1YOR250C ARC15P40518 154 aaRIP-Chip data4.14□□□□□ -1.75not detected
CLP1YOR250C YLR162WQ06235 118 aa4.14□□□□□ -1.75
CLP1YOR250C YLR285C-AQ3E771 56 aa4.14□□□□□ -1.75
CLP1YOR250C YOR011W-AQ3E807 68 aa4.14□□□□□ -1.75
Retrieved 100 of 5,963 RNA–protein pairs in 85.6 ms