RNA–Protein interactions for RNA: YOL090W

MSH2, Transcript of Protein that binds to DNA mismatches, yeastyeast

Gene MSH2, Length 2,895 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MSH2YOL090W YHR007C-AQ07074 71 aa1.98□□□□□ -2.09
MSH2YOL090W CYB5P40312 120 aa1.97□□□□□ -2.09
MSH2YOL090W YGL014C-AP0C5N1 53 aa1.97□□□□□ -2.09
MSH2YOL090W YCL042WP25572 119 aa1.97□□□□□ -2.09
MSH2YOL090W AIM4P38305 123 aaPredicted RBP1.97□□□□□ -2.09
MSH2YOL090W HPA2Q06592 156 aa1.97□□□□□ -2.09
MSH2YOL090W HMRA2P0CY13 119 aa1.96□□□□□ -2.09
MSH2YOL090W YHR138CP38841 114 aaPredicted RBP1.96□□□□□ -2.09
MSH2YOL090W RPS22AP0C0W1 130 aaKnown RBP1.96□□□□□ -2.1
MSH2YOL090W YBR027CP38220 110 aa1.96□□□□□ -2.1
MSH2YOL090W YLR285C-AQ3E771 56 aa1.96□□□□□ -2.1
MSH2YOL090W GCV3P39726 170 aaPredicted RBP1.95□□□□□ -2.1
MSH2YOL090W MIX17Q03667 156 aa1.95□□□□□ -2.1
MSH2YOL090W YDL012CQ12489 107 aa1.95□□□□□ -2.1
MSH2YOL090W FLO9P39712 1322 aa1.95□□□□□ -2.1
MSH2YOL090W RPL22AP05749 121 aaKnown RBP1.94□□□□□ -2.1
MSH2YOL090W POC4Q12245 148 aaPredicted RBP1.94□□□□□ -2.1
MSH2YOL090W YLR363W-AQ3E747 85 aa1.94□□□□□ -2.1
MSH2YOL090W LSM2P38203 95 aaKnown RBP1.94□□□□□ -2.1
MSH2YOL090W SUS1Q6WNK7 96 aa1.94□□□□□ -2.1
MSH2YOL090W CYR1P08678 2026 aaKnown RBP1.94□□□□□ -2.1
MSH2YOL090W ICY1Q04329 127 aa1.93□□□□□ -2.1
MSH2YOL090W PRM3Q08931 133 aa1.93□□□□□ -2.1
MSH2YOL090W YMR175W-AQ3E766 64 aa1.93□□□□□ -2.1
MSH2YOL090W NRG2P38082 220 aa1.93□□□□□ -2.1
MSH2YOL090W LST8P41318 303 aa1.93□□□□□ -2.1
MSH2YOL090W POR2P40478 281 aa1.92□□□□□ -2.1
MSH2YOL090W YFL065CP43539 102 aa1.92□□□□□ -2.1
MSH2YOL090W YLR162WQ06235 118 aa1.92□□□□□ -2.1
MSH2YOL090W YPR203WQ08994 102 aa1.92□□□□□ -2.1
MSH2YOL090W DYN1P36022 4092 aa1.92□□□□□ -2.1
MSH2YOL090W RPL33AP05744 107 aaKnown RBP1.92□□□□□ -2.1
MSH2YOL090W ROX3P25046 220 aa1.92□□□□□ -2.1
MSH2YOL090W RPS22BQ3E7Y3 130 aaKnown RBP1.92□□□□□ -2.1
MSH2YOL090W GCN1P33892 2672 aaKnown RBP1.92□□□□□ -2.1
MSH2YOL090W YCR085WP25650 117 aa1.92□□□□□ -2.1
MSH2YOL090W RSM18P40033 138 aa1.92□□□□□ -2.1
MSH2YOL090W IMP2P46972 177 aa1.92□□□□□ -2.1
MSH2YOL090W SED1Q01589 338 aa1.92□□□□□ -2.1
MSH2YOL090W VAM10Q08474 114 aa1.92□□□□□ -2.1
MSH2YOL090W YBR219CP38317 127 aa1.91□□□□□ -2.1
MSH2YOL090W ENV10Q99382 181 aa1.91□□□□□ -2.1
MSH2YOL090W POL2P21951 2222 aaKnown RBP1.91□□□□□ -2.1
MSH2YOL090W YBR056W-AI2HB52 66 aa1.91□□□□□ -2.1
MSH2YOL090W RPA12P32529 125 aaKnown RBP1.91□□□□□ -2.1
MSH2YOL090W YIL163CP40448 117 aa1.91□□□□□ -2.1
MSH2YOL090W YMR122CQ03879 124 aa1.9□□□□□ -2.1
MSH2YOL090W YHR086W-AQ3E746 53 aa1.9□□□□□ -2.1
MSH2YOL090W ICS3P47034 131 aa1.9□□□□□ -2.11
MSH2YOL090W COA3Q3E7B2 85 aa1.9□□□□□ -2.11
MSH2YOL090W YOR032W-AQ8TGS1 66 aa1.9□□□□□ -2.11
MSH2YOL090W HFA1P32874 2273 aa1.9□□□□□ -2.11
MSH2YOL090W YHL005CP38752 130 aa1.89□□□□□ -2.11
MSH2YOL090W GIS2P53849 153 aaKnown RBP RIP-Chip data1.89□□□□□ -2.11not detected
MSH2YOL090W LSM6Q06406 86 aaKnown RBP1.89□□□□□ -2.11
MSH2YOL090W PRM7Q12459 698 aa1.89□□□□□ -2.11
MSH2YOL090W COA4Q05809 96 aa1.89□□□□□ -2.11
MSH2YOL090W YHR213W-AQ8TGT4 77 aa1.89□□□□□ -2.11
MSH2YOL090W YSF3P0C074 85 aaPredicted RBP1.88□□□□□ -2.11
MSH2YOL090W SPC1P46965 94 aa1.88□□□□□ -2.11
MSH2YOL090W YPR096CO13587 100 aa1.88□□□□□ -2.11
MSH2YOL090W IRA2P19158 3079 aa1.88□□□□□ -2.11
MSH2YOL090W NHP2P32495 156 aaPredicted RBP1.88□□□□□ -2.11
MSH2YOL090W YIL086CP40503 102 aa1.87□□□□□ -2.11
MSH2YOL090W YCR095W-AQ3E787 52 aa1.87□□□□□ -2.11
MSH2YOL090W PFY1P07274 126 aa1.87□□□□□ -2.11
MSH2YOL090W MRPL38P35996 138 aaPredicted RBP1.87□□□□□ -2.11
MSH2YOL090W CCW12Q12127 133 aa1.87□□□□□ -2.11
MSH2YOL090W YPR145C-AQ2V2P0 78 aa1.87□□□□□ -2.11
MSH2YOL090W PRP8P33334 2413 aaKnown RBP1.86□□□□□ -2.11
MSH2YOL090W MRP17P28778 131 aa1.86□□□□□ -2.11
MSH2YOL090W YNL146C-AQ3E7Z1 64 aa1.86□□□□□ -2.11
MSH2YOL090W YBR013CP38215 129 aa1.85□□□□□ -2.11
MSH2YOL090W PAU6P0CE90 120 aa1.85□□□□□ -2.11
MSH2YOL090W PAU18P0CE91 120 aa1.85□□□□□ -2.11
MSH2YOL090W MRPS12P53732 153 aa1.85□□□□□ -2.11
MSH2YOL090W SEC16P48415 2195 aaKnown RBP1.84□□□□□ -2.11
MSH2YOL090W VPS55P47111 140 aa1.84□□□□□ -2.11
MSH2YOL090W MEC1P38111 2368 aa1.83□□□□□ -2.12
MSH2YOL090W YBL071CP38185 102 aa1.83□□□□□ -2.12
MSH2YOL090W YHL037CP38733 133 aa1.83□□□□□ -2.12
MSH2YOL090W YOL118CQ08259 102 aa1.83□□□□□ -2.12
MSH2YOL090W YDR119W-AQ2V2P9 66 aa1.83□□□□□ -2.12
MSH2YOL090W LCL2Q08045 131 aa1.82□□□□□ -2.12
MSH2YOL090W TOM6P33448 61 aa1.82□□□□□ -2.12
MSH2YOL090W SNA2P56508 79 aa1.81□□□□□ -2.12
MSH2YOL090W MHF2Q3E829 80 aa1.81□□□□□ -2.12
MSH2YOL090W PAI3P01094 68 aa1.81□□□□□ -2.12
MSH2YOL090W UTP20P35194 2493 aaKnown RBP1.81□□□□□ -2.12
MSH2YOL090W MIC27P50945 234 aa1.81□□□□□ -2.12
MSH2YOL090W IRA1P18963 3092 aa1.81□□□□□ -2.12
MSH2YOL090W CSF1Q12150 2958 aa1.81□□□□□ -2.12
MSH2YOL090W AQY2P0CD90 149 aa1.8□□□□□ -2.12
MSH2YOL090W YDR210WQ03482 75 aa1.8□□□□□ -2.12
MSH2YOL090W YCL048W-AQ2V2Q2 79 aa1.8□□□□□ -2.12
MSH2YOL090W SLH1P53327 1967 aaKnown RBP1.8□□□□□ -2.12
MSH2YOL090W YFR010W-AP0C5N0 62 aa1.79□□□□□ -2.12
MSH2YOL090W PAU8P0CE92 120 aa1.79□□□□□ -2.12
MSH2YOL090W PAU11P0CE93 120 aa1.79□□□□□ -2.12
MSH2YOL090W PDX3P38075 228 aaKnown RBP1.79□□□□□ -2.12
Retrieved 100 of 5,963 RNA–protein pairs in 23.6 ms