RNA–Protein interactions for RNA: YNR004W

SWM2, Transcript of Protein with a role in snRNA and snoRNA cap trimethylation, yeastyeast

Gene SWM2, Length 441 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SWM2YNR004W BUD4P47136 1447 aa0.2□□□□□ -2.38
SWM2YNR004W MSL1P40567 111 aaPredicted RBP0.19□□□□□ -2.38
SWM2YNR004W RIM15P43565 1770 aa0.19□□□□□ -2.38
SWM2YNR004W MDS3P53094 1487 aa0.18□□□□□ -2.38
SWM2YNR004W YBR201C-AQ2V2Q3 67 aa0.17□□□□□ -2.38
SWM2YNR004W RSF2P46974 1380 aa0.17□□□□□ -2.38
SWM2YNR004W YDR381C-AQ3E6R5 114 aa0.16□□□□□ -2.38
SWM2YNR004W SDH6Q3E785 79 aa0.16□□□□□ -2.38
SWM2YNR004W REV3P14284 1504 aa0.15□□□□□ -2.39
SWM2YNR004W PDR11P40550 1411 aa0.14□□□□□ -2.39
SWM2YNR004W NTE1Q04958 1679 aa0.14□□□□□ -2.39
SWM2YNR004W YAL065CO13511 128 aa0.13□□□□□ -2.39
SWM2YNR004W YGR025WP53216 100 aa0.13□□□□□ -2.39
SWM2YNR004W ATP18P81450 59 aa0.13□□□□□ -2.39
SWM2YNR004W YRF1-2P40105 1681 aa0.12□□□□□ -2.39
SWM2YNR004W FPR2P32472 135 aa0.12□□□□□ -2.39
SWM2YNR004W TY1B-BLQ12490 1755 aa0.11□□□□□ -2.39
SWM2YNR004W BPT1P14772 1559 aa0.11□□□□□ -2.39
SWM2YNR004W YPL225WQ08971 146 aaKnown RBP0.11□□□□□ -2.39
SWM2YNR004W YOL097W-AQ3E7Y9 61 aa0.1□□□□□ -2.39
SWM2YNR004W YCL001W-BQ96VH2 84 aa0.1□□□□□ -2.39
SWM2YNR004W YBR032WP38223 100 aa0.09□□□□□ -2.4
SWM2YNR004W YMR122W-AQ3E842 84 aa0.09□□□□□ -2.4
SWM2YNR004W YCR085WP25650 117 aa0.08□□□□□ -2.4
SWM2YNR004W EDC1P53080 175 aaPredicted RBP0.08□□□□□ -2.4
SWM2YNR004W YDR042CQ03205 200 aa0.08□□□□□ -2.4
SWM2YNR004W SCP1Q08873 200 aa0.08□□□□□ -2.4
SWM2YNR004W RRT15Q3E811 62 aa0.08□□□□□ -2.4
SWM2YNR004W YRF1-1P0CX20 1796 aa0.07□□□□□ -2.4
SWM2YNR004W YRF1-5P0CX21 1796 aa0.07□□□□□ -2.4
SWM2YNR004W YRF1-8P0CX22 1796 aa0.07□□□□□ -2.4
SWM2YNR004W YPR108W-AQ3E7B3 70 aa0.06□□□□□ -2.4
SWM2YNR004W YCR108CQ3E819 63 aa0.06□□□□□ -2.4
SWM2YNR004W ECM12O13529 151 aa0.04□□□□□ -2.4
SWM2YNR004W PAU23Q07987 124 aa0.04□□□□□ -2.4
SWM2YNR004W PAU17Q12370 124 aa0.04□□□□□ -2.4
SWM2YNR004W YDR246W-AQ3E763 66 aa0.04□□□□□ -2.4
SWM2YNR004W YOR105WQ08504 108 aa-0.01□□□□□ -2.41
SWM2YNR004W YOR343CQ12484 108 aa-0.02□□□□□ -2.41
SWM2YNR004W YCR075W-AQ3E830 75 aa-0.05□□□□□ -2.42
SWM2YNR004W GDB1Q06625 1536 aa-0.06□□□□□ -2.42
SWM2YNR004W YBL044WP38194 122 aa-0.06□□□□□ -2.42
SWM2YNR004W YKL065W-AQ2V2P2 73 aa-0.06□□□□□ -2.42
SWM2YNR004W NOP10Q6Q547 58 aaPredicted RBP-0.06□□□□□ -2.42
SWM2YNR004W YMR001C-AQ8TGS9 76 aa-0.07□□□□□ -2.42
SWM2YNR004W RPS29AP41057 56 aaKnown RBP-0.08□□□□□ -2.42
SWM2YNR004W POL1P13382 1468 aa-0.09□□□□□ -2.42
SWM2YNR004W YMR082CQ04276 118 aa-0.09□□□□□ -2.42
SWM2YNR004W DNF3Q12674 1656 aa-0.09□□□□□ -2.42
SWM2YNR004W SEN1Q00416 2231 aaKnown RBP-0.09□□□□□ -2.42
SWM2YNR004W MMS1Q06211 1407 aa-0.1□□□□□ -2.43
SWM2YNR004W SWR1Q05471 1514 aa-0.11□□□□□ -2.43
SWM2YNR004W YOR008C-AQ3E7B9 74 aa-0.11□□□□□ -2.43
SWM2YNR004W RPA190P10964 1664 aaKnown RBP-0.11□□□□□ -2.43
SWM2YNR004W HKR1P41809 1802 aa-0.12□□□□□ -2.43
SWM2YNR004W YKL018C-AQ3E7A7 99 aa-0.12□□□□□ -2.43
SWM2YNR004W TY1B-BRQ12193 1756 aa-0.13□□□□□ -2.43
SWM2YNR004W OLI1P61829 76 aa-0.13□□□□□ -2.43
SWM2YNR004W YMR175W-AQ3E766 64 aa-0.13□□□□□ -2.43
SWM2YNR004W LSM2P38203 95 aaKnown RBP-0.14□□□□□ -2.43
SWM2YNR004W YLR146W-AQ2V2P1 62 aa-0.14□□□□□ -2.43
SWM2YNR004W BPH1P25356 2167 aa-0.14□□□□□ -2.43
SWM2YNR004W TY1B-LR3P0C2I6 1755 aaKnown RBP-0.14□□□□□ -2.43
SWM2YNR004W TY1B-PR3P0C2J1 1755 aaKnown RBP-0.14□□□□□ -2.43
SWM2YNR004W YIL156W-BQ2V2P4 73 aa-0.15□□□□□ -2.43
SWM2YNR004W POC4Q12245 148 aaPredicted RBP-0.16□□□□□ -2.44
SWM2YNR004W YOR314WQ12506 109 aa-0.16□□□□□ -2.44
SWM2YNR004W UTP20P35194 2493 aaKnown RBP-0.16□□□□□ -2.44
SWM2YNR004W SIP18P50263 79 aa-0.18□□□□□ -2.44
SWM2YNR004W YDR182W-AQ3E796 67 aa-0.18□□□□□ -2.44
SWM2YNR004W CWP2P43497 92 aa-0.19□□□□□ -2.44
SWM2YNR004W TY1B-PR2P0C2J0 1756 aa-0.19□□□□□ -2.44
SWM2YNR004W YGL194C-AQ2V2P6 80 aa-0.2□□□□□ -2.44
SWM2YNR004W PDR10P51533 1564 aa-0.21□□□□□ -2.44
SWM2YNR004W TY1B-DR6P0C2I3 1755 aa-0.22□□□□□ -2.44
SWM2YNR004W TY1B-LR2P0C2I5 1755 aa-0.22□□□□□ -2.44
SWM2YNR004W TY1B-JR2P47100 1755 aaKnown RBP-0.22□□□□□ -2.44
SWM2YNR004W TY1B-MR1Q04214 1755 aa-0.22□□□□□ -2.44
SWM2YNR004W TY1B-MR2Q04670 1755 aaKnown RBP-0.22□□□□□ -2.44
SWM2YNR004W TY1B-NL1Q12112 1755 aa-0.22□□□□□ -2.44
SWM2YNR004W TY1B-GR1Q12141 1755 aa-0.22□□□□□ -2.44
SWM2YNR004W TY1B-GR3Q12316 1755 aa-0.22□□□□□ -2.44
SWM2YNR004W TY1B-PLQ12414 1755 aaKnown RBP-0.22□□□□□ -2.44
SWM2YNR004W TY1B-ORQ92393 1755 aa-0.22□□□□□ -2.44
SWM2YNR004W STT4P37297 1900 aa-0.22□□□□□ -2.44
SWM2YNR004W ATP17Q06405 101 aa-0.22□□□□□ -2.44
SWM2YNR004W QCR9P22289 66 aa-0.23□□□□□ -2.45
SWM2YNR004W YPR145C-AQ2V2P0 78 aa-0.23□□□□□ -2.45
SWM2YNR004W MOT1P32333 1867 aa-0.23□□□□□ -2.45
SWM2YNR004W LTE1P07866 1435 aa-0.23□□□□□ -2.45
SWM2YNR004W SMC4Q12267 1418 aa-0.23□□□□□ -2.45
SWM2YNR004W ECM29P38737 1868 aa-0.24□□□□□ -2.45
SWM2YNR004W SWM2P40342 146 aa-0.24□□□□□ -2.45
SWM2YNR004W PMD1P32634 1753 aa-0.25□□□□□ -2.45
SWM2YNR004W TY1B-DR5P0C2I2 1755 aa-0.26□□□□□ -2.45
SWM2YNR004W TY1B-PR1P0C2I9 1755 aaKnown RBP-0.26□□□□□ -2.45
SWM2YNR004W TY1B-ER2Q03619 1755 aa-0.26□□□□□ -2.45
SWM2YNR004W TY1B-DR1Q03855 1755 aa-0.26□□□□□ -2.45
SWM2YNR004W TY1B-ML1Q04711 1755 aaKnown RBP-0.26□□□□□ -2.45
SWM2YNR004W TY1B-LR1Q12088 1755 aaKnown RBP-0.26□□□□□ -2.45
Retrieved 100 of 5,963 RNA–protein pairs in 12.5 ms