RNA–Protein interactions for RNA: YLR336C

SGD1, Transcript of Essential nuclear protein, yeastyeast

Gene SGD1, Length 2,700 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SGD1YLR336C GTT1P40582 234 aa0.19□□□□□ -2.38
SGD1YLR336C LSM6Q06406 86 aaKnown RBP0.19□□□□□ -2.38
SGD1YLR336C RRP5Q05022 1729 aaKnown RBP0.19□□□□□ -2.38
SGD1YLR336C IQG1Q12280 1495 aa0.18□□□□□ -2.38
SGD1YLR336C TSC11P40061 1430 aa0.18□□□□□ -2.38
SGD1YLR336C LYS2P07702 1392 aa0.17□□□□□ -2.38
SGD1YLR336C RTR2Q12378 196 aa0.17□□□□□ -2.38
SGD1YLR336C IRA2P19158 3079 aa0.17□□□□□ -2.38
SGD1YLR336C SHU1P38751 150 aa0.17□□□□□ -2.38
SGD1YLR336C YCL048W-AQ2V2Q2 79 aa0.17□□□□□ -2.38
SGD1YLR336C RPA12P32529 125 aaKnown RBP0.16□□□□□ -2.38
SGD1YLR336C YIL086CP40503 102 aa0.16□□□□□ -2.38
SGD1YLR336C PAU15P40585 124 aa0.16□□□□□ -2.38
SGD1YLR336C PAU16P35994 123 aa0.16□□□□□ -2.38
SGD1YLR336C IMP2P46972 177 aa0.16□□□□□ -2.38
SGD1YLR336C YDR210WQ03482 75 aa0.16□□□□□ -2.38
SGD1YLR336C BUD23P25627 275 aaPredicted RBP0.15□□□□□ -2.38
SGD1YLR336C YOL118CQ08259 102 aa0.15□□□□□ -2.38
SGD1YLR336C YIR021W-AQ3E739 70 aa0.15□□□□□ -2.38
SGD1YLR336C CCW14O13547 238 aa0.15□□□□□ -2.39
SGD1YLR336C SPT6P23615 1451 aaKnown RBP0.15□□□□□ -2.39
SGD1YLR336C HUR1P45820 110 aa0.15□□□□□ -2.39
SGD1YLR336C RPO41P13433 1351 aaKnown RBP0.14□□□□□ -2.39
SGD1YLR336C YLR419WQ06698 1435 aaKnown RBP0.14□□□□□ -2.39
SGD1YLR336C TOM1Q03280 3268 aa0.14□□□□□ -2.39
SGD1YLR336C APC1P53886 1748 aa0.14□□□□□ -2.39
SGD1YLR336C YER039C-AP0CD97 72 aa0.14□□□□□ -2.39
SGD1YLR336C MLP2P40457 1679 aa0.14□□□□□ -2.39
SGD1YLR336C YHR138CP38841 114 aaPredicted RBP0.13□□□□□ -2.39
SGD1YLR336C RPS29AP41057 56 aaKnown RBP0.13□□□□□ -2.39
SGD1YLR336C MPC2P38857 129 aa0.12□□□□□ -2.39
SGD1YLR336C YPL038W-AQ3E7B4 63 aa0.12□□□□□ -2.39
SGD1YLR336C YGR164WP53291 111 aa0.11□□□□□ -2.39
SGD1YLR336C YNL190WP53872 204 aa0.11□□□□□ -2.39
SGD1YLR336C COX19Q3E731 98 aa0.11□□□□□ -2.39
SGD1YLR336C YOR304C-AO14468 76 aa0.11□□□□□ -2.39
SGD1YLR336C VMA21P41806 77 aa0.11□□□□□ -2.39
SGD1YLR336C TY1B-DR5P0C2I2 1755 aa0.11□□□□□ -2.39
SGD1YLR336C TY1B-DR6P0C2I3 1755 aa0.11□□□□□ -2.39
SGD1YLR336C TY1B-LR2P0C2I5 1755 aa0.11□□□□□ -2.39
SGD1YLR336C TY1B-LR3P0C2I6 1755 aaKnown RBP0.11□□□□□ -2.39
SGD1YLR336C TY1B-PR1P0C2I9 1755 aaKnown RBP0.11□□□□□ -2.39
SGD1YLR336C TY1B-PR2P0C2J0 1756 aa0.11□□□□□ -2.39
SGD1YLR336C TY1B-PR3P0C2J1 1755 aaKnown RBP0.11□□□□□ -2.39
SGD1YLR336C TY1B-JR1P47098 1755 aa0.11□□□□□ -2.39
SGD1YLR336C TY1B-ML2Q03434 1755 aaKnown RBP0.11□□□□□ -2.39
SGD1YLR336C TY1B-ER1Q03612 1755 aa0.11□□□□□ -2.39
SGD1YLR336C TY1B-ML1Q04711 1755 aaKnown RBP0.11□□□□□ -2.39
SGD1YLR336C TY1B-GR2Q12269 1755 aa0.11□□□□□ -2.39
SGD1YLR336C TY1B-OLQ12273 1755 aa0.11□□□□□ -2.39
SGD1YLR336C TY1B-PLQ12414 1755 aaKnown RBP0.11□□□□□ -2.39
SGD1YLR336C TY1B-JR2P47100 1755 aaKnown RBP0.1□□□□□ -2.39
SGD1YLR336C TY1B-ER2Q03619 1755 aa0.1□□□□□ -2.39
SGD1YLR336C TY1B-DR1Q03855 1755 aa0.1□□□□□ -2.39
SGD1YLR336C TY1B-MR2Q04670 1755 aaKnown RBP0.1□□□□□ -2.39
SGD1YLR336C TY1B-LR1Q12088 1755 aaKnown RBP0.1□□□□□ -2.39
SGD1YLR336C TY1B-NL1Q12112 1755 aa0.1□□□□□ -2.39
SGD1YLR336C TY1B-GR1Q12141 1755 aa0.1□□□□□ -2.39
SGD1YLR336C TY1B-DR3Q99231 1755 aa0.1□□□□□ -2.39
SGD1YLR336C YCR101CP25607 182 aa0.1□□□□□ -2.39
SGD1YLR336C MIC10Q96VH5 97 aa0.1□□□□□ -2.39
SGD1YLR336C MEC1P38111 2368 aa0.1□□□□□ -2.39
SGD1YLR336C RPS11AP0CX47 156 aaKnown RBP0.09□□□□□ -2.39
SGD1YLR336C RPS11BP0CX48 156 aaKnown RBP0.09□□□□□ -2.39
SGD1YLR336C LHP1P33399 275 aaKnown RBP0.09□□□□□ -2.4
SGD1YLR336C SWC7Q06707 132 aa0.08□□□□□ -2.4
SGD1YLR336C RUB1Q03919 77 aa0.07□□□□□ -2.4
SGD1YLR336C KRE5P22023 1365 aa0.07□□□□□ -2.4
SGD1YLR336C SRB6P32570 121 aa0.07□□□□□ -2.4
SGD1YLR336C COX12Q01519 83 aa0.07□□□□□ -2.4
SGD1YLR336C YOS1Q3E834 85 aa0.07□□□□□ -2.4
SGD1YLR336C VPS13Q07878 3144 aa0.07□□□□□ -2.4
SGD1YLR336C YMR103CQ04436 120 aa0.07□□□□□ -2.4
SGD1YLR336C PMD1P32634 1753 aa0.06□□□□□ -2.4
SGD1YLR336C MRPL38P35996 138 aaPredicted RBP0.06□□□□□ -2.4
SGD1YLR336C MRX7P53869 86 aa0.06□□□□□ -2.4
SGD1YLR336C YCR095W-AQ3E787 52 aa0.06□□□□□ -2.4
SGD1YLR336C PAU5P43575 122 aa0.06□□□□□ -2.4
SGD1YLR336C GNA1P43577 159 aaPredicted RBP0.06□□□□□ -2.4
SGD1YLR336C UBC4P15731 148 aa0.05□□□□□ -2.4
SGD1YLR336C TY1B-BLQ12490 1755 aa0.05□□□□□ -2.4
SGD1YLR336C PAU6P0CE90 120 aa0.05□□□□□ -2.4
SGD1YLR336C PAU18P0CE91 120 aa0.05□□□□□ -2.4
SGD1YLR336C ICY1Q04329 127 aa0.05□□□□□ -2.4
SGD1YLR336C TY1B-MR1Q04214 1755 aa0.03□□□□□ -2.4
SGD1YLR336C RPC10P40422 70 aa0.03□□□□□ -2.4
SGD1YLR336C SNA2P56508 79 aa0.03□□□□□ -2.4
SGD1YLR336C YNR034W-AQ3E841 98 aa0.03□□□□□ -2.4
SGD1YLR336C FKS3Q04952 1785 aa0.03□□□□□ -2.4
SGD1YLR336C UBC5P15732 148 aa0.01□□□□□ -2.41
SGD1YLR336C ROX3P25046 220 aa0.01□□□□□ -2.41
SGD1YLR336C RSM18P40033 138 aa0.01□□□□□ -2.41
SGD1YLR336C YMR090WQ04304 227 aaKnown RBP0.01□□□□□ -2.41
SGD1YLR336C YNL198CP40166 100 aa0.01□□□□□ -2.41
SGD1YLR336C YBR292CP38357 123 aa0□□□□□ -2.41
SGD1YLR336C RSM19P53733 91 aaPredicted RBP0□□□□□ -2.41
SGD1YLR336C PAU20Q08322 120 aa0□□□□□ -2.41
SGD1YLR336C ECM29P38737 1868 aa0□□□□□ -2.41
SGD1YLR336C SKI3P17883 1432 aaKnown RBP0□□□□□ -2.41
SGD1YLR336C MRP17P28778 131 aa0□□□□□ -2.41
Retrieved 100 of 5,963 RNA–protein pairs in 44.1 ms