RNA–Protein interactions for RNA: YKL139W

CTK1, Transcript of Catalytic (alpha) subunit of C-terminal domain kinase I (CTDK-I), yeastyeast

Gene CTK1, Length 1,587 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CTK1YKL139W PAU6P0CE90 120 aa1.26□□□□□ -2.21
CTK1YKL139W PAU18P0CE91 120 aa1.26□□□□□ -2.21
CTK1YKL139W TCB3Q03640 1545 aaKnown RBP1.26□□□□□ -2.21
CTK1YKL139W ULS1Q08562 1619 aa1.26□□□□□ -2.21
CTK1YKL139W YRF1-1P0CX20 1796 aa1.26□□□□□ -2.21
CTK1YKL139W YRF1-5P0CX21 1796 aa1.26□□□□□ -2.21
CTK1YKL139W YRF1-8P0CX22 1796 aa1.26□□□□□ -2.21
CTK1YKL139W EMC5P40540 141 aa1.25□□□□□ -2.21
CTK1YKL139W RSF2P46974 1380 aa1.25□□□□□ -2.21
CTK1YKL139W VPS15P22219 1454 aa1.25□□□□□ -2.21
CTK1YKL139W MPC2P38857 129 aa1.25□□□□□ -2.21
CTK1YKL139W MRX7P53869 86 aa1.25□□□□□ -2.21
CTK1YKL139W YHR173CP38864 112 aa1.24□□□□□ -2.21
CTK1YKL139W YBR072C-AQ3E794 53 aa1.24□□□□□ -2.21
CTK1YKL139W BCK1Q01389 1478 aa1.23□□□□□ -2.21
CTK1YKL139W YBL071CP38185 102 aa1.23□□□□□ -2.21
CTK1YKL139W MSL1P40567 111 aaPredicted RBP1.23□□□□□ -2.21
CTK1YKL139W ARO1P08566 1588 aaKnown RBP1.22□□□□□ -2.21
CTK1YKL139W MRPL38P35996 138 aaPredicted RBP1.21□□□□□ -2.22
CTK1YKL139W ICY1Q04329 127 aa1.21□□□□□ -2.22
CTK1YKL139W YDR010CQ12426 110 aa1.21□□□□□ -2.22
CTK1YKL139W YNR034W-AQ3E841 98 aa1.21□□□□□ -2.22
CTK1YKL139W MRP17P28778 131 aa1.21□□□□□ -2.22
CTK1YKL139W TY4B-HP0C2J7 1802 aa1.2□□□□□ -2.22
CTK1YKL139W PDR5P33302 1511 aaKnown RBP1.19□□□□□ -2.22
CTK1YKL139W GDB1Q06625 1536 aa1.19□□□□□ -2.22
CTK1YKL139W BRR2P32639 2163 aaKnown RBP1.19□□□□□ -2.22
CTK1YKL139W SPC1P46965 94 aa1.19□□□□□ -2.22
CTK1YKL139W NHP10Q03435 203 aa1.19□□□□□ -2.22
CTK1YKL139W XRN1P22147 1528 aaKnown RBP1.18□□□□□ -2.22
CTK1YKL139W NUP170P38181 1502 aa1.18□□□□□ -2.22
CTK1YKL139W YRF1-2P40105 1681 aa1.18□□□□□ -2.22
CTK1YKL139W YDR029WQ12111 104 aa1.18□□□□□ -2.22
CTK1YKL139W PAU20Q08322 120 aa1.17□□□□□ -2.22
CTK1YKL139W YCR075W-AQ3E830 75 aa1.17□□□□□ -2.22
CTK1YKL139W ATG2P53855 1592 aa1.17□□□□□ -2.22
CTK1YKL139W BUD3P25558 1636 aa1.17□□□□□ -2.22
CTK1YKL139W SPT6P23615 1451 aaKnown RBP1.17□□□□□ -2.22
CTK1YKL139W SCC2Q04002 1493 aa1.17□□□□□ -2.22
CTK1YKL139W IML1P47170 1584 aa1.17□□□□□ -2.22
CTK1YKL139W YSP2Q06681 1438 aa1.17□□□□□ -2.22
CTK1YKL139W RSM18P40033 138 aa1.17□□□□□ -2.22
CTK1YKL139W AIM19P40502 157 aa1.17□□□□□ -2.22
CTK1YKL139W RPS11AP0CX47 156 aaKnown RBP1.16□□□□□ -2.22
CTK1YKL139W RPS11BP0CX48 156 aaKnown RBP1.16□□□□□ -2.22
CTK1YKL139W YBR292CP38357 123 aa1.16□□□□□ -2.22
CTK1YKL139W YDR042CQ03205 200 aa1.16□□□□□ -2.22
CTK1YKL139W SNQ2P32568 1501 aaKnown RBP1.16□□□□□ -2.22
CTK1YKL139W POL2P21951 2222 aaKnown RBP1.15□□□□□ -2.23
CTK1YKL139W YCL001W-BQ96VH2 84 aa1.15□□□□□ -2.23
CTK1YKL139W PAU1P0CE88 120 aa1.14□□□□□ -2.23
CTK1YKL139W PAU14P0CE89 120 aa1.14□□□□□ -2.23
CTK1YKL139W PAU8P0CE92 120 aa1.14□□□□□ -2.23
CTK1YKL139W PAU11P0CE93 120 aa1.14□□□□□ -2.23
CTK1YKL139W PAU13P38725 120 aa1.14□□□□□ -2.23
CTK1YKL139W PAU10Q03050 120 aa1.14□□□□□ -2.23
CTK1YKL139W PAU9Q3E770 120 aa1.14□□□□□ -2.23
CTK1YKL139W SUS1Q6WNK7 96 aa1.14□□□□□ -2.23
CTK1YKL139W MYO1P08964 1928 aa1.14□□□□□ -2.23
CTK1YKL139W YOL164W-AQ3E7A5 60 aa1.13□□□□□ -2.23
CTK1YKL139W SNU13P39990 126 aaKnown RBP1.12□□□□□ -2.23
CTK1YKL139W PAU4P53427 120 aa1.12□□□□□ -2.23
CTK1YKL139W YMR082CQ04276 118 aa1.09□□□□□ -2.23
CTK1YKL139W UFD4P33202 1483 aa1.08□□□□□ -2.24
CTK1YKL139W RPO21P04050 1733 aaKnown RBP1.08□□□□□ -2.24
CTK1YKL139W NUP159P40477 1460 aa1.08□□□□□ -2.24
CTK1YKL139W RPA12P32529 125 aaKnown RBP1.08□□□□□ -2.24
CTK1YKL139W YBT1P32386 1661 aa1.07□□□□□ -2.24
CTK1YKL139W SPO14P36126 1683 aa1.07□□□□□ -2.24
CTK1YKL139W MYO4P32492 1471 aa1.06□□□□□ -2.24
CTK1YKL139W ECM12O13529 151 aa1.06□□□□□ -2.24
CTK1YKL139W TY1B-BRQ12193 1756 aa1.05□□□□□ -2.24
CTK1YKL139W TY1B-GR3Q12316 1755 aa1.05□□□□□ -2.24
CTK1YKL139W TY1B-ORQ92393 1755 aa1.05□□□□□ -2.24
CTK1YKL139W NHP2P32495 156 aaPredicted RBP1.05□□□□□ -2.24
CTK1YKL139W MHF2Q3E829 80 aa1.05□□□□□ -2.24
CTK1YKL139W VTH1P40438 1549 aa1.05□□□□□ -2.24
CTK1YKL139W VTH2P40890 1549 aa1.05□□□□□ -2.24
CTK1YKL139W BLM10P43583 2143 aa1.04□□□□□ -2.24
CTK1YKL139W YNL190WP53872 204 aa1.04□□□□□ -2.24
CTK1YKL139W YGL194C-AQ2V2P6 80 aa1.04□□□□□ -2.24
CTK1YKL139W SKI3P17883 1432 aaKnown RBP1.04□□□□□ -2.24
CTK1YKL139W STU1P38198 1513 aa1.04□□□□□ -2.24
CTK1YKL139W RPS29BP41058 56 aaKnown RBP1.04□□□□□ -2.24
CTK1YKL139W BSC4P53841 131 aa1.04□□□□□ -2.24
CTK1YKL139W IQG1Q12280 1495 aa1.04□□□□□ -2.24
CTK1YKL139W TY1B-NL2Q99337 1749 aaKnown RBP1.04□□□□□ -2.24
CTK1YKL139W NUP192P47054 1683 aa1.03□□□□□ -2.24
CTK1YKL139W RPC10P40422 70 aa1.02□□□□□ -2.25
CTK1YKL139W SCP1Q08873 200 aa1.02□□□□□ -2.25
CTK1YKL139W YNL042W-BQ3E7Z2 85 aa1.02□□□□□ -2.25
CTK1YKL139W RIM15P43565 1770 aa1.01□□□□□ -2.25
CTK1YKL139W FAS2P19097 1887 aaKnown RBP1□□□□□ -2.25
CTK1YKL139W VMR1P38735 1592 aa1□□□□□ -2.25
CTK1YKL139W Q0032Q9ZZX7 96 aa0.99□□□□□ -2.25
CTK1YKL139W MMS22Q06164 1454 aa0.99□□□□□ -2.25
CTK1YKL139W YMR175W-AQ3E766 64 aa0.98□□□□□ -2.25
CTK1YKL139W TY1B-BLQ12490 1755 aa0.98□□□□□ -2.25
CTK1YKL139W ESP1Q03018 1630 aa0.97□□□□□ -2.25
CTK1YKL139W YNL198CP40166 100 aa0.96□□□□□ -2.26
Retrieved 100 of 5,963 RNA–protein pairs in 23.9 ms