RNA–Protein interactions for RNA: YFR029W

PTR3, Transcript of Component of the SPS plasma membrane amino acid sensor system, yeastyeast

Gene PTR3, Length 2,037 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PTR3YFR029W TAR1Q8TGM6 124 aa2.66□□□□□ -1.98
PTR3YFR029W CYR1P08678 2026 aaKnown RBP2.66□□□□□ -1.98
PTR3YFR029W YEL008WP40001 126 aa2.66□□□□□ -1.98
PTR3YFR029W DNF3Q12674 1656 aa2.66□□□□□ -1.98
PTR3YFR029W MRPL38P35996 138 aaPredicted RBP2.65□□□□□ -1.99
PTR3YFR029W USO1P25386 1790 aa2.65□□□□□ -1.99
PTR3YFR029W YBR292CP38357 123 aa2.64□□□□□ -1.99
PTR3YFR029W MIC27P50945 234 aa2.64□□□□□ -1.99
PTR3YFR029W MIX17Q03667 156 aa2.63□□□□□ -1.99
PTR3YFR029W LSM6Q06406 86 aaKnown RBP2.63□□□□□ -1.99
PTR3YFR029W YDR381C-AQ3E6R5 114 aa2.63□□□□□ -1.99
PTR3YFR029W YCR095W-AQ3E787 52 aa2.63□□□□□ -1.99
PTR3YFR029W MRP17P28778 131 aa2.63□□□□□ -1.99
PTR3YFR029W ATX1P38636 73 aa2.63□□□□□ -1.99
PTR3YFR029W RPL22AP05749 121 aaKnown RBP2.62□□□□□ -1.99
PTR3YFR029W YIL163CP40448 117 aa2.62□□□□□ -1.99
PTR3YFR029W YHR007C-AQ07074 71 aa2.62□□□□□ -1.99
PTR3YFR029W YOL118CQ08259 102 aa2.62□□□□□ -1.99
PTR3YFR029W PAU6P0CE90 120 aa2.61□□□□□ -1.99
PTR3YFR029W PAU18P0CE91 120 aa2.61□□□□□ -1.99
PTR3YFR029W YHR214C-DP0CX93 97 aa2.61□□□□□ -1.99
PTR3YFR029W SNF2P22082 1703 aa2.6□□□□□ -1.99
PTR3YFR029W PDX3P38075 228 aaKnown RBP2.6□□□□□ -1.99
PTR3YFR029W YNL198CP40166 100 aa2.6□□□□□ -1.99
PTR3YFR029W SED1Q01589 338 aa2.6□□□□□ -1.99
PTR3YFR029W YMR321CQ04898 105 aa2.6□□□□□ -1.99
PTR3YFR029W APC1P53886 1748 aa2.6□□□□□ -1.99
PTR3YFR029W ECM29P38737 1868 aa2.59□□□□□ -1.99
PTR3YFR029W ACC1Q00955 2233 aaKnown RBP2.59□□□□□ -1.99
PTR3YFR029W RPL33AP05744 107 aaKnown RBP2.59□□□□□ -1.99
PTR3YFR029W YHL037CP38733 133 aa2.59□□□□□ -1.99
PTR3YFR029W DSE2P38844 325 aa2.59□□□□□ -1.99
PTR3YFR029W SWM2P40342 146 aa2.59□□□□□ -1.99
PTR3YFR029W YMR122CQ03879 124 aa2.59□□□□□ -1.99
PTR3YFR029W MHF2Q3E829 80 aa2.59□□□□□ -1.99
PTR3YFR029W TY4B-HP0C2J7 1802 aa2.59□□□□□ -1.99
PTR3YFR029W TY4B-JP47024 1803 aa2.59□□□□□ -1.99
PTR3YFR029W TIM12P32830 109 aa2.59□□□□□ -2
PTR3YFR029W VAM10Q08474 114 aa2.59□□□□□ -2
PTR3YFR029W YIL134C-AQ45U18 67 aa2.59□□□□□ -2
PTR3YFR029W RRP5Q05022 1729 aaKnown RBP2.59□□□□□ -2
PTR3YFR029W YBL071CP38185 102 aa2.58□□□□□ -2
PTR3YFR029W YSF3P0C074 85 aaPredicted RBP2.58□□□□□ -2
PTR3YFR029W MRPS12P53732 153 aa2.58□□□□□ -2
PTR3YFR029W CCW12Q12127 133 aa2.57□□□□□ -2
PTR3YFR029W UBR2Q07963 1872 aa2.56□□□□□ -2
PTR3YFR029W PFY1P07274 126 aa2.56□□□□□ -2
PTR3YFR029W VPS55P47111 140 aa2.56□□□□□ -2
PTR3YFR029W YOR343CQ12484 108 aa2.56□□□□□ -2
PTR3YFR029W YPL038W-AQ3E7B4 63 aa2.56□□□□□ -2
PTR3YFR029W URB1P34241 1764 aaKnown RBP2.55□□□□□ -2
PTR3YFR029W UTP10P42945 1769 aaKnown RBP2.55□□□□□ -2
PTR3YFR029W SNA2P56508 79 aa2.55□□□□□ -2
PTR3YFR029W IRC21Q04772 201 aa2.55□□□□□ -2
PTR3YFR029W PAU23Q07987 124 aa2.55□□□□□ -2
PTR3YFR029W PAU17Q12370 124 aa2.55□□□□□ -2
PTR3YFR029W YDL012CQ12489 107 aa2.55□□□□□ -2
PTR3YFR029W PAU8P0CE92 120 aa2.54□□□□□ -2
PTR3YFR029W PAU11P0CE93 120 aa2.54□□□□□ -2
PTR3YFR029W PAU13P38725 120 aa2.54□□□□□ -2
PTR3YFR029W PAU4P53427 120 aa2.54□□□□□ -2
PTR3YFR029W PAU10Q03050 120 aa2.54□□□□□ -2
PTR3YFR029W YDR210WQ03482 75 aa2.54□□□□□ -2
PTR3YFR029W PAU9Q3E770 120 aa2.54□□□□□ -2
PTR3YFR029W YFL041W-AQ3E817 63 aa2.54□□□□□ -2
PTR3YFR029W YNR034W-AQ3E841 98 aa2.54□□□□□ -2
PTR3YFR029W LCL2Q08045 131 aa2.54□□□□□ -2
PTR3YFR029W YER188C-AP0C0V2 99 aa2.53□□□□□ -2
PTR3YFR029W YCL042WP25572 119 aa2.53□□□□□ -2
PTR3YFR029W MRX7P53869 86 aa2.53□□□□□ -2
PTR3YFR029W YOR105WQ08504 108 aa2.53□□□□□ -2
PTR3YFR029W MPC2P38857 129 aa2.52□□□□□ -2.01
PTR3YFR029W YCL048W-AQ2V2Q2 79 aa2.52□□□□□ -2.01
PTR3YFR029W COA3Q3E7B2 85 aa2.52□□□□□ -2.01
PTR3YFR029W FKS3Q04952 1785 aa2.52□□□□□ -2.01
PTR3YFR029W YLR162WQ06235 118 aa2.52□□□□□ -2.01
PTR3YFR029W YIL156W-BQ2V2P4 73 aa2.52□□□□□ -2.01
PTR3YFR029W CCW14O13547 238 aa2.51□□□□□ -2.01
PTR3YFR029W YGR121W-AQ3E816 71 aa2.51□□□□□ -2.01
PTR3YFR029W PAU1P0CE88 120 aa2.51□□□□□ -2.01
PTR3YFR029W PAU14P0CE89 120 aa2.51□□□□□ -2.01
PTR3YFR029W YBR219CP38317 127 aa2.51□□□□□ -2.01
PTR3YFR029W YOR314WQ12506 109 aa2.51□□□□□ -2.01
PTR3YFR029W YLR255CO13574 117 aa2.5□□□□□ -2.01
PTR3YFR029W MRPL31P14063 131 aaPredicted RBP2.5□□□□□ -2.01
PTR3YFR029W VMA9Q3E7B6 73 aa2.49□□□□□ -2.01
PTR3YFR029W YAL065CO13511 128 aa2.49□□□□□ -2.01
PTR3YFR029W PAU20Q08322 120 aa2.49□□□□□ -2.01
PTR3YFR029W YDR010CQ12426 110 aa2.49□□□□□ -2.01
PTR3YFR029W COX19Q3E731 98 aa2.49□□□□□ -2.01
PTR3YFR029W BPH1P25356 2167 aa2.48□□□□□ -2.01
PTR3YFR029W STT4P37297 1900 aa2.48□□□□□ -2.01
PTR3YFR029W YHR173CP38864 112 aa2.47□□□□□ -2.01
PTR3YFR029W PRM7Q12459 698 aa2.47□□□□□ -2.01
PTR3YFR029W YHR086W-AQ3E746 53 aa2.47□□□□□ -2.01
PTR3YFR029W PMD1P32634 1753 aa2.46□□□□□ -2.01
PTR3YFR029W NOP10Q6Q547 58 aaPredicted RBP2.46□□□□□ -2.02
PTR3YFR029W BSC4P53841 131 aa2.46□□□□□ -2.02
PTR3YFR029W COX12Q01519 83 aa2.46□□□□□ -2.02
PTR3YFR029W SLH1P53327 1967 aaKnown RBP2.45□□□□□ -2.02
Retrieved 100 of 5,963 RNA–protein pairs in 76.6 ms